RNA–Protein interactions for RNA: ENST00000552755.1

RPH3A-226, Transcript of rabphilin 3A, humanhuman

TSL 5

Gene RPH3A, Length 1,043 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-226ENST00000552755 NISCHQ9Y2I1 1504 aa32.92■■■□□ 2.86
RPH3A-226ENST00000552755 CCDC180Q9P1Z9 1646 aa29.23■■■□□ 2.27
RPH3A-226ENST00000552755 ABCC9O60706 1549 aa28.94■■■□□ 2.22
RPH3A-226ENST00000552755 DCAF8L2P0C7V8 631 aa27.73■■■□□ 2.03
RPH3A-226ENST00000552755 RB1CC1Q8TDY2 1594 aa27.69■■■□□ 2.02
RPH3A-226ENST00000552755 NACADO15069 1562 aa27.61■■■□□ 2.01
RPH3A-226ENST00000552755 ZCCHC6Q5VYS8 1495 aaKnown RBP27.39■■□□□ 1.98
RPH3A-226ENST00000552755 MYO15BQ96JP2 1530 aa27.38■■□□□ 1.97
RPH3A-226ENST00000552755 DCAF1Q9Y4B6 1507 aa27.2■■□□□ 1.94
RPH3A-226ENST00000552755 PABPN1Q86U42 306 aaKnown RBP eCLIP27.07■■□□□ 1.92
RPH3A-226ENST00000552755 UNC13AQ9UPW8 1703 aa26.85■■□□□ 1.89
RPH3A-226ENST00000552755 BICRAQ9NZM4 1560 aa26.81■■□□□ 1.88
RPH3A-226ENST00000552755 SCRIBQ14160 1630 aa26.76■■□□□ 1.87
RPH3A-226ENST00000552755 DNAJC5BQ9UF47 199 aa26.72■■□□□ 1.87
RPH3A-226ENST00000552755 SHROOM4Q9ULL8 1493 aa26.57■■□□□ 1.84
RPH3A-226ENST00000552755 EIF4G1Q04637 1599 aaKnown RBP26.17■■□□□ 1.78
RPH3A-226ENST00000552755 CC2D2AQ9P2K1 1620 aa26.08■■□□□ 1.77
RPH3A-226ENST00000552755 CECR2Q9BXF3 1484 aa26.02■■□□□ 1.76
RPH3A-226ENST00000552755 SMARCA4P51532 1647 aa25.54■■□□□ 1.68
RPH3A-226ENST00000552755 BAZ1AQ9NRL2 1556 aaPredicted RBP25.53■■□□□ 1.68
RPH3A-226ENST00000552755 NCAPD3P42695 1498 aa25.53■■□□□ 1.68
RPH3A-226ENST00000552755 ATAD2BQ9ULI0 1458 aa25.51■■□□□ 1.67
RPH3A-226ENST00000552755 SMARCA2P51531 1590 aa25.45■■□□□ 1.66
RPH3A-226ENST00000552755 MROH2BQ7Z745 1585 aa25.37■■□□□ 1.65
RPH3A-226ENST00000552755 HMGXB3Q12766 1538 aa25.34■■□□□ 1.65
RPH3A-226ENST00000552755 BAZ1BQ9UIG0 1483 aaKnown RBP25.31■■□□□ 1.64
RPH3A-226ENST00000552755 PEG3Q9GZU2 1588 aa25.28■■□□□ 1.64
RPH3A-226ENST00000552755 RSF1Q96T23 1441 aaPredicted RBP25.05■■□□□ 1.6
RPH3A-226ENST00000552755 WIZO95785 1651 aa25.03■■□□□ 1.6
RPH3A-226ENST00000552755 ERCC6Q03468 1493 aa24.99■■□□□ 1.59
RPH3A-226ENST00000552755 NESP48681 1621 aa24.96■■□□□ 1.59
RPH3A-226ENST00000552755 LAMC3Q9Y6N6 1575 aa24.83■■□□□ 1.57
RPH3A-226ENST00000552755 TOP2AP11388 1531 aaKnown RBP24.81■■□□□ 1.56
RPH3A-226ENST00000552755 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
RPH3A-226ENST00000552755 PDS5BQ9NTI5 1447 aa24.76■■□□□ 1.55
RPH3A-226ENST00000552755 CUX2O14529 1486 aa24.73■■□□□ 1.55
RPH3A-226ENST00000552755 CFTRP13569 1480 aa24.59■■□□□ 1.53
RPH3A-226ENST00000552755 THOC2Q8NI27 1593 aaKnown RBP24.55■■□□□ 1.52
RPH3A-226ENST00000552755 CCDC88BA6NC98 1476 aa24.54■■□□□ 1.52
RPH3A-226ENST00000552755 KIF21AQ7Z4S6 1674 aa24.53■■□□□ 1.52
RPH3A-226ENST00000552755 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
RPH3A-226ENST00000552755 MRC2Q9UBG0 1479 aa24.5■■□□□ 1.51
RPH3A-226ENST00000552755 CEP164Q9UPV0 1460 aa24.5■■□□□ 1.51
RPH3A-226ENST00000552755 SUPT5HO00267 1087 aaKnown RBP24.38■■□□□ 1.49
RPH3A-226ENST00000552755 WDR62O43379 1518 aa24.37■■□□□ 1.49
RPH3A-226ENST00000552755 URB2Q14146 1524 aaKnown RBP24.24■■□□□ 1.47
RPH3A-226ENST00000552755 DNAJC5Q9H3Z4 198 aa24.22■■□□□ 1.47
RPH3A-226ENST00000552755 PRDM2Q13029 1718 aa24.15■■□□□ 1.46
RPH3A-226ENST00000552755 TOPBP1Q92547 1522 aa24.06■■□□□ 1.44
RPH3A-226ENST00000552755 ABCC8Q09428 1581 aa24.06■■□□□ 1.44
RPH3A-226ENST00000552755 DNMBPQ6XZF7 1577 aa24■■□□□ 1.43
RPH3A-226ENST00000552755 IFT140Q96RY7 1462 aa23.99■■□□□ 1.43
RPH3A-226ENST00000552755 ZNF608Q9ULD9 1512 aaPredicted RBP23.88■■□□□ 1.41
RPH3A-226ENST00000552755 POLA1P09884 1462 aaPredicted RBP23.87■■□□□ 1.41
RPH3A-226ENST00000552755 CUX1P39880 1505 aa23.81■■□□□ 1.4
RPH3A-226ENST00000552755 SOGA1O94964 1423 aa23.8■■□□□ 1.4
RPH3A-226ENST00000552755 FGD5Q6ZNL6 1462 aa23.79■■□□□ 1.4
RPH3A-226ENST00000552755 RAD54L2Q9Y4B4 1467 aa23.78■■□□□ 1.4
RPH3A-226ENST00000552755 TARBP1Q13395 1621 aaKnown RBP23.75■■□□□ 1.39
RPH3A-226ENST00000552755 AQRO60306 1485 aaKnown RBP eCLIP23.75■■□□□ 1.39
RPH3A-226ENST00000552755 OSCARQ8IYS5 282 aa23.74■■□□□ 1.39
RPH3A-226ENST00000552755 EIF4G3O43432 1585 aaKnown RBP23.73■■□□□ 1.39
RPH3A-226ENST00000552755 TDRD9Q8NDG6 1382 aaKnown RBP23.7■■□□□ 1.38
RPH3A-226ENST00000552755 WRNQ14191 1432 aaPredicted RBP eCLIP23.65■■□□□ 1.38
RPH3A-226ENST00000552755 FBLN2P98095 1184 aa23.58■■□□□ 1.37
RPH3A-226ENST00000552755 WDR97A6NE52 1622 aa23.56■■□□□ 1.36
RPH3A-226ENST00000552755 GRIN2BQ13224 1484 aa23.53■■□□□ 1.36
RPH3A-226ENST00000552755 ABCA10Q8WWZ4 1543 aa23.53■■□□□ 1.36
RPH3A-226ENST00000552755 TOP2BQ02880 1626 aa23.52■■□□□ 1.36
RPH3A-226ENST00000552755 SNAPC4Q5SXM2 1469 aa23.52■■□□□ 1.36
RPH3A-226ENST00000552755 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
RPH3A-226ENST00000552755 GAPVD1Q14C86 1478 aa23.5■■□□□ 1.35
RPH3A-226ENST00000552755 BIVM-ERCC5R4GMW8 1640 aa23.48■■□□□ 1.35
RPH3A-226ENST00000552755 CHMP7Q8WUX9 453 aaPredicted RBP23.46■■□□□ 1.35
RPH3A-226ENST00000552755 MAGI1Q96QZ7 1491 aaPredicted RBP23.46■■□□□ 1.35
RPH3A-226ENST00000552755 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
RPH3A-226ENST00000552755 SYNJ2O15056 1496 aa23.39■■□□□ 1.34
RPH3A-226ENST00000552755 ABCA5Q8WWZ7 1642 aa23.39■■□□□ 1.33
RPH3A-226ENST00000552755 CHD1O14646 1710 aa23.38■■□□□ 1.33
RPH3A-226ENST00000552755 PBRM1Q86U86 1689 aa23.32■■□□□ 1.32
RPH3A-226ENST00000552755 ARHGEF11O15085 1522 aa23.29■■□□□ 1.32
RPH3A-226ENST00000552755 RIMBP3CA6NJZ7 1639 aa23.26■■□□□ 1.31
RPH3A-226ENST00000552755 RIMBP3BA6NNM3 1639 aa23.26■■□□□ 1.31
RPH3A-226ENST00000552755 RIMBP3Q9UFD9 1639 aa23.26■■□□□ 1.31
RPH3A-226ENST00000552755 FHAD1B1AJZ9 1412 aa23.24■■□□□ 1.31
RPH3A-226ENST00000552755 ERICH3Q5RHP9 1530 aa23.23■■□□□ 1.31
RPH3A-226ENST00000552755 ADAMTS12P58397 1594 aa23.22■■□□□ 1.31
RPH3A-226ENST00000552755 GRIN2AQ12879 1464 aa23.21■■□□□ 1.31
RPH3A-226ENST00000552755 CLASP1Q7Z460 1538 aa23.21■■□□□ 1.31
RPH3A-226ENST00000552755 KIF27Q86VH2 1401 aa23.18■■□□□ 1.3
RPH3A-226ENST00000552755 CYB5RLQ6IPT4 315 aa23.17■■□□□ 1.3
RPH3A-226ENST00000552755 NUP160Q12769 1436 aa23.11■■□□□ 1.29
RPH3A-226ENST00000552755 ARAP1Q96P48 1450 aa23.11■■□□□ 1.29
RPH3A-226ENST00000552755 IGF1RP08069 1367 aa23.09■■□□□ 1.29
RPH3A-226ENST00000552755 CEP170Q5SW79 1584 aa23.06■■□□□ 1.28
RPH3A-226ENST00000552755 CARMIL1Q5VZK9 1371 aa22.97■■□□□ 1.27
RPH3A-226ENST00000552755 CUL7Q14999 1698 aa22.94■■□□□ 1.26
RPH3A-226ENST00000552755 JPH4Q96JJ6 628 aa22.92■■□□□ 1.26
RPH3A-226ENST00000552755 PRG4Q92954 1404 aaPredicted RBP22.89■■□□□ 1.25
RPH3A-226ENST00000552755 ERCC6L2Q5T890 1561 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms