RNA–Protein interactions for RNA: ENST00000552668.1

KRT4-205, Transcript of keratin 4, humanhuman

TSL 4

Gene KRT4, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-205ENST00000552668 NISCHQ9Y2I1 1504 aa26.36■■□□□ 1.81
KRT4-205ENST00000552668 ABCC9O60706 1549 aa24.45■■□□□ 1.5
KRT4-205ENST00000552668 CCDC180Q9P1Z9 1646 aa23.83■■□□□ 1.41
KRT4-205ENST00000552668 DNAJC5BQ9UF47 199 aa23.58■■□□□ 1.37
KRT4-205ENST00000552668 RB1CC1Q8TDY2 1594 aa22.95■■□□□ 1.26
KRT4-205ENST00000552668 PABPN1Q86U42 306 aaKnown RBP eCLIP22.69■■□□□ 1.22
KRT4-205ENST00000552668 NACADO15069 1562 aa22.68■■□□□ 1.22
KRT4-205ENST00000552668 UNC13AQ9UPW8 1703 aa22.48■■□□□ 1.19
KRT4-205ENST00000552668 BICRAQ9NZM4 1560 aa22.45■■□□□ 1.18
KRT4-205ENST00000552668 DCAF8L2P0C7V8 631 aa22.38■■□□□ 1.17
KRT4-205ENST00000552668 MYO15BQ96JP2 1530 aa22.22■■□□□ 1.15
KRT4-205ENST00000552668 CECR2Q9BXF3 1484 aa22.08■■□□□ 1.12
KRT4-205ENST00000552668 CC2D2AQ9P2K1 1620 aa22.05■■□□□ 1.12
KRT4-205ENST00000552668 DNAJC5Q9H3Z4 198 aa21.97■■□□□ 1.11
KRT4-205ENST00000552668 SHROOM4Q9ULL8 1493 aa21.96■■□□□ 1.11
KRT4-205ENST00000552668 EIF4G1Q04637 1599 aaKnown RBP21.87■■□□□ 1.09
KRT4-205ENST00000552668 ZCCHC6Q5VYS8 1495 aaKnown RBP21.73■■□□□ 1.07
KRT4-205ENST00000552668 DCAF1Q9Y4B6 1507 aa21.73■■□□□ 1.07
KRT4-205ENST00000552668 SCRIBQ14160 1630 aa21.71■■□□□ 1.07
KRT4-205ENST00000552668 CUX2O14529 1486 aa21.26■□□□□ 0.99
KRT4-205ENST00000552668 ERCC6Q03468 1493 aa21.06■□□□□ 0.96
KRT4-205ENST00000552668 NCAPD3P42695 1498 aa21.01■□□□□ 0.95
KRT4-205ENST00000552668 NESP48681 1621 aa20.89■□□□□ 0.93
KRT4-205ENST00000552668 ATAD2BQ9ULI0 1458 aa20.87■□□□□ 0.93
KRT4-205ENST00000552668 HMGXB3Q12766 1538 aa20.76■□□□□ 0.91
KRT4-205ENST00000552668 THOC2Q8NI27 1593 aaKnown RBP20.76■□□□□ 0.91
KRT4-205ENST00000552668 SMARCA2P51531 1590 aa20.69■□□□□ 0.9
KRT4-205ENST00000552668 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
KRT4-205ENST00000552668 SMARCA4P51532 1647 aa20.67■□□□□ 0.9
KRT4-205ENST00000552668 BAZ1BQ9UIG0 1483 aaKnown RBP20.56■□□□□ 0.88
KRT4-205ENST00000552668 LAMC3Q9Y6N6 1575 aa20.55■□□□□ 0.88
KRT4-205ENST00000552668 KIF21AQ7Z4S6 1674 aa20.53■□□□□ 0.88
KRT4-205ENST00000552668 PEG3Q9GZU2 1588 aa20.5■□□□□ 0.87
KRT4-205ENST00000552668 PDS5BQ9NTI5 1447 aa20.44■□□□□ 0.86
KRT4-205ENST00000552668 BAZ1AQ9NRL2 1556 aaPredicted RBP20.43■□□□□ 0.86
KRT4-205ENST00000552668 MROH2BQ7Z745 1585 aa20.34■□□□□ 0.85
KRT4-205ENST00000552668 MRC2Q9UBG0 1479 aa20.34■□□□□ 0.85
KRT4-205ENST00000552668 WDR62O43379 1518 aa20.33■□□□□ 0.85
KRT4-205ENST00000552668 CADPSQ9ULU8 1353 aa20.32■□□□□ 0.84
KRT4-205ENST00000552668 OSCARQ8IYS5 282 aa20.18■□□□□ 0.82
KRT4-205ENST00000552668 CEP164Q9UPV0 1460 aa20.11■□□□□ 0.81
KRT4-205ENST00000552668 FANCD2Q9BXW9 1451 aa20.07■□□□□ 0.8
KRT4-205ENST00000552668 WIZO95785 1651 aa20.03■□□□□ 0.8
KRT4-205ENST00000552668 RIMBP3CA6NJZ7 1639 aa20.02■□□□□ 0.8
KRT4-205ENST00000552668 RIMBP3BA6NNM3 1639 aa20.02■□□□□ 0.8
KRT4-205ENST00000552668 RIMBP3Q9UFD9 1639 aa20.02■□□□□ 0.8
KRT4-205ENST00000552668 URB2Q14146 1524 aaKnown RBP20.01■□□□□ 0.79
KRT4-205ENST00000552668 CFTRP13569 1480 aa19.99■□□□□ 0.79
KRT4-205ENST00000552668 ARHGEF11O15085 1522 aa19.92■□□□□ 0.78
KRT4-205ENST00000552668 ZNF608Q9ULD9 1512 aaPredicted RBP19.86■□□□□ 0.77
KRT4-205ENST00000552668 CYB5RLQ6IPT4 315 aa19.77■□□□□ 0.76
KRT4-205ENST00000552668 IFT140Q96RY7 1462 aa19.74■□□□□ 0.75
KRT4-205ENST00000552668 TOP2AP11388 1531 aaKnown RBP19.71■□□□□ 0.75
KRT4-205ENST00000552668 RSF1Q96T23 1441 aaPredicted RBP19.71■□□□□ 0.75
KRT4-205ENST00000552668 ARAP1Q96P48 1450 aa19.71■□□□□ 0.75
KRT4-205ENST00000552668 TRHP20396 242 aaPredicted RBP19.65■□□□□ 0.74
KRT4-205ENST00000552668 TOPBP1Q92547 1522 aa19.65■□□□□ 0.74
KRT4-205ENST00000552668 EIF4G3O43432 1585 aaKnown RBP19.65■□□□□ 0.74
KRT4-205ENST00000552668 PRDM2Q13029 1718 aa19.62■□□□□ 0.73
KRT4-205ENST00000552668 CHD1O14646 1710 aa19.59■□□□□ 0.73
KRT4-205ENST00000552668 AQRO60306 1485 aaKnown RBP eCLIP19.58■□□□□ 0.72
KRT4-205ENST00000552668 TARBP1Q13395 1621 aaKnown RBP19.54■□□□□ 0.72
KRT4-205ENST00000552668 CCDC88BA6NC98 1476 aa19.54■□□□□ 0.72
KRT4-205ENST00000552668 DNMBPQ6XZF7 1577 aa19.49■□□□□ 0.71
KRT4-205ENST00000552668 ABCC8Q09428 1581 aa19.47■□□□□ 0.71
KRT4-205ENST00000552668 FBLN2P98095 1184 aa19.45■□□□□ 0.7
KRT4-205ENST00000552668 AEBP2Q6ZN18 517 aaPredicted RBP19.44■□□□□ 0.7
KRT4-205ENST00000552668 POLA1P09884 1462 aaPredicted RBP19.42■□□□□ 0.7
KRT4-205ENST00000552668 CLASP1Q7Z460 1538 aa19.42■□□□□ 0.7
KRT4-205ENST00000552668 RAD54L2Q9Y4B4 1467 aa19.38■□□□□ 0.69
KRT4-205ENST00000552668 TDRD9Q8NDG6 1382 aaKnown RBP19.36■□□□□ 0.69
KRT4-205ENST00000552668 SNAPC4Q5SXM2 1469 aa19.33■□□□□ 0.68
KRT4-205ENST00000552668 SOGA1O94964 1423 aa19.28■□□□□ 0.68
KRT4-205ENST00000552668 SYNJ1O43426 1573 aa19.24■□□□□ 0.67
KRT4-205ENST00000552668 MAGI1Q96QZ7 1491 aaPredicted RBP19.22■□□□□ 0.67
KRT4-205ENST00000552668 CHMP7Q8WUX9 453 aaPredicted RBP19.22■□□□□ 0.67
KRT4-205ENST00000552668 GAPVD1Q14C86 1478 aa19.21■□□□□ 0.67
KRT4-205ENST00000552668 WDR97A6NE52 1622 aa19.2■□□□□ 0.66
KRT4-205ENST00000552668 FGD5Q6ZNL6 1462 aa19.2■□□□□ 0.66
KRT4-205ENST00000552668 SYNJ2O15056 1496 aa19.19■□□□□ 0.66
KRT4-205ENST00000552668 GRIN2BQ13224 1484 aa19.17■□□□□ 0.66
KRT4-205ENST00000552668 CUX1P39880 1505 aa19.13■□□□□ 0.65
KRT4-205ENST00000552668 ERCC6L2Q5T890 1561 aa19.12■□□□□ 0.65
KRT4-205ENST00000552668 PBRM1Q86U86 1689 aa19.03■□□□□ 0.64
KRT4-205ENST00000552668 ABCA5Q8WWZ7 1642 aa18.99■□□□□ 0.63
KRT4-205ENST00000552668 CEP170Q5SW79 1584 aa18.97■□□□□ 0.63
KRT4-205ENST00000552668 KIF13AQ9H1H9 1805 aa18.95■□□□□ 0.62
KRT4-205ENST00000552668 ABCA10Q8WWZ4 1543 aa18.95■□□□□ 0.62
KRT4-205ENST00000552668 GRIN2AQ12879 1464 aa18.95■□□□□ 0.62
KRT4-205ENST00000552668 NUP160Q12769 1436 aa18.94■□□□□ 0.62
KRT4-205ENST00000552668 SHROOM2Q13796 1616 aa18.92■□□□□ 0.62
KRT4-205ENST00000552668 ADAMTS12P58397 1594 aa18.87■□□□□ 0.61
KRT4-205ENST00000552668 KDM4FA0A1W2PPD8 638 aa18.84■□□□□ 0.61
KRT4-205ENST00000552668 ILDR1Q86SU0 546 aaPredicted RBP18.81■□□□□ 0.6
KRT4-205ENST00000552668 ABCC10Q5T3U5 1492 aa18.79■□□□□ 0.6
KRT4-205ENST00000552668 FHAD1B1AJZ9 1412 aa18.77■□□□□ 0.6
KRT4-205ENST00000552668 PRG4Q92954 1404 aaPredicted RBP18.76■□□□□ 0.59
KRT4-205ENST00000552668 FAM69CQ0P6D2 419 aa18.76■□□□□ 0.59
KRT4-205ENST00000552668 MAPKBP1O60336 1514 aa18.72■□□□□ 0.59
KRT4-205ENST00000552668 WRNQ14191 1432 aaPredicted RBP eCLIP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms