RNA–Protein interactions for RNA: ENST00000552629.5

KRT5-210, Transcript of keratin 5, humanhuman

TSL 1 (best)

Gene KRT5, Length 2,046 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT5-210ENST00000552629 NISCHQ9Y2I1 1504 aa46.78■■■■■ 5.08
KRT5-210ENST00000552629 CCDC180Q9P1Z9 1646 aa40.99■■■■■ 4.15
KRT5-210ENST00000552629 ABCC9O60706 1549 aa39.38■■■■□ 3.89
KRT5-210ENST00000552629 ZCCHC6Q5VYS8 1495 aaKnown RBP39.17■■■■□ 3.86
KRT5-210ENST00000552629 DCAF8L2P0C7V8 631 aa39.02■■■■□ 3.84
KRT5-210ENST00000552629 DCAF1Q9Y4B6 1507 aa38.59■■■■□ 3.77
KRT5-210ENST00000552629 MYO15BQ96JP2 1530 aa38.32■■■■□ 3.73
KRT5-210ENST00000552629 NACADO15069 1562 aa38.32■■■■□ 3.72
KRT5-210ENST00000552629 RB1CC1Q8TDY2 1594 aa38.15■■■■□ 3.7
KRT5-210ENST00000552629 SHROOM4Q9ULL8 1493 aa37.96■■■■□ 3.67
KRT5-210ENST00000552629 SCRIBQ14160 1630 aa37.74■■■■□ 3.63
KRT5-210ENST00000552629 UNC13AQ9UPW8 1703 aa37.39■■■■□ 3.58
KRT5-210ENST00000552629 PABPN1Q86U42 306 aaKnown RBP eCLIP37.07■■■■□ 3.52
KRT5-210ENST00000552629 BICRAQ9NZM4 1560 aa36.99■■■■□ 3.51
KRT5-210ENST00000552629 CECR2Q9BXF3 1484 aa36.44■■■■□ 3.42
KRT5-210ENST00000552629 SUPT5HO00267 1087 aaKnown RBP36.26■■■■□ 3.4
KRT5-210ENST00000552629 BAZ1AQ9NRL2 1556 aaPredicted RBP36.17■■■■□ 3.38
KRT5-210ENST00000552629 MROH2BQ7Z745 1585 aa36.15■■■■□ 3.38
KRT5-210ENST00000552629 RSF1Q96T23 1441 aaPredicted RBP36.1■■■■□ 3.37
KRT5-210ENST00000552629 SMARCA4P51532 1647 aa36.08■■■■□ 3.37
KRT5-210ENST00000552629 EIF4G1Q04637 1599 aaKnown RBP35.95■■■■□ 3.35
KRT5-210ENST00000552629 WIZO95785 1651 aa35.85■■■■□ 3.33
KRT5-210ENST00000552629 ATAD2BQ9ULI0 1458 aa35.62■■■■□ 3.29
KRT5-210ENST00000552629 PEG3Q9GZU2 1588 aa35.6■■■■□ 3.29
KRT5-210ENST00000552629 CC2D2AQ9P2K1 1620 aa35.58■■■■□ 3.29
KRT5-210ENST00000552629 SMARCA2P51531 1590 aa35.57■■■■□ 3.29
KRT5-210ENST00000552629 BAZ1BQ9UIG0 1483 aaKnown RBP35.43■■■■□ 3.26
KRT5-210ENST00000552629 TOP2AP11388 1531 aaKnown RBP35.41■■■■□ 3.26
KRT5-210ENST00000552629 NCAPD3P42695 1498 aa35.37■■■■□ 3.25
KRT5-210ENST00000552629 HMGXB3Q12766 1538 aa35.27■■■■□ 3.24
KRT5-210ENST00000552629 DNAJC5BQ9UF47 199 aa35.2■■■■□ 3.23
KRT5-210ENST00000552629 CCDC88BA6NC98 1476 aa35.07■■■■□ 3.2
KRT5-210ENST00000552629 CADPSQ9ULU8 1353 aa34.47■■■■□ 3.11
KRT5-210ENST00000552629 CFTRP13569 1480 aa34.46■■■■□ 3.11
KRT5-210ENST00000552629 NESP48681 1621 aa34.39■■■■□ 3.1
KRT5-210ENST00000552629 CHIC1Q5VXU3 224 aa34.33■■■■□ 3.09
KRT5-210ENST00000552629 LAMC3Q9Y6N6 1575 aa34.28■■■■□ 3.08
KRT5-210ENST00000552629 PRDM2Q13029 1718 aa34.24■■■■□ 3.07
KRT5-210ENST00000552629 ABCC8Q09428 1581 aa34.22■■■■□ 3.07
KRT5-210ENST00000552629 FANCD2Q9BXW9 1451 aa34.11■■■■□ 3.05
KRT5-210ENST00000552629 TRIM41Q8WV44 630 aa34.09■■■■□ 3.05
KRT5-210ENST00000552629 PDS5BQ9NTI5 1447 aa34.05■■■■□ 3.04
KRT5-210ENST00000552629 WRNQ14191 1432 aaPredicted RBP eCLIP34.02■■■■□ 3.04
KRT5-210ENST00000552629 KIF21AQ7Z4S6 1674 aa33.95■■■■□ 3.03
KRT5-210ENST00000552629 CEP164Q9UPV0 1460 aa33.95■■■■□ 3.02
KRT5-210ENST00000552629 SYNJ1O43426 1573 aa33.9■■■■□ 3.02
KRT5-210ENST00000552629 CUX1P39880 1505 aa33.83■■■■□ 3.01
KRT5-210ENST00000552629 ERCC6Q03468 1493 aa33.83■■■■□ 3.01
KRT5-210ENST00000552629 TOP2BQ02880 1626 aa33.78■■■■□ 3
KRT5-210ENST00000552629 BIVM-ERCC5R4GMW8 1640 aa33.73■■■□□ 2.99
KRT5-210ENST00000552629 URB2Q14146 1524 aaKnown RBP33.7■■■□□ 2.98
KRT5-210ENST00000552629 DNMBPQ6XZF7 1577 aa33.68■■■□□ 2.98
KRT5-210ENST00000552629 TOPBP1Q92547 1522 aa33.66■■■□□ 2.98
KRT5-210ENST00000552629 MRC2Q9UBG0 1479 aa33.64■■■□□ 2.97
KRT5-210ENST00000552629 FGD5Q6ZNL6 1462 aa33.56■■■□□ 2.96
KRT5-210ENST00000552629 FAM9AQ8IZU1 332 aaPredicted RBP33.53■■■□□ 2.96
KRT5-210ENST00000552629 THOC2Q8NI27 1593 aaKnown RBP33.49■■■□□ 2.95
KRT5-210ENST00000552629 POLA1P09884 1462 aaPredicted RBP33.47■■■□□ 2.95
KRT5-210ENST00000552629 WDR62O43379 1518 aa33.46■■■□□ 2.95
KRT5-210ENST00000552629 SOGA1O94964 1423 aa33.46■■■□□ 2.95
KRT5-210ENST00000552629 RAD54L2Q9Y4B4 1467 aa33.39■■■□□ 2.94
KRT5-210ENST00000552629 RUSC2Q8N2Y8 1516 aa33.36■■■□□ 2.93
KRT5-210ENST00000552629 CUX2O14529 1486 aa33.26■■■□□ 2.92
KRT5-210ENST00000552629 ABCA10Q8WWZ4 1543 aa33.21■■■□□ 2.91
KRT5-210ENST00000552629 KIF27Q86VH2 1401 aa33.2■■■□□ 2.91
KRT5-210ENST00000552629 EEA1Q15075 1411 aa33.19■■■□□ 2.9
KRT5-210ENST00000552629 TARBP1Q13395 1621 aaKnown RBP33.18■■■□□ 2.9
KRT5-210ENST00000552629 EHMT2Q96KQ7 1210 aa33.15■■■□□ 2.9
KRT5-210ENST00000552629 WDR97A6NE52 1622 aa33.14■■■□□ 2.9
KRT5-210ENST00000552629 CSRNP3Q8WYN3 585 aa33.14■■■□□ 2.9
KRT5-210ENST00000552629 IFT140Q96RY7 1462 aa33.13■■■□□ 2.89
KRT5-210ENST00000552629 TDRD9Q8NDG6 1382 aaKnown RBP33.13■■■□□ 2.89
KRT5-210ENST00000552629 LOC105371045A0A1W2PR82 267 aa33.07■■■□□ 2.89
KRT5-210ENST00000552629 ZNF608Q9ULD9 1512 aaPredicted RBP33.03■■■□□ 2.88
KRT5-210ENST00000552629 AQRO60306 1485 aaKnown RBP eCLIP33■■■□□ 2.87
KRT5-210ENST00000552629 GAPVD1Q14C86 1478 aa32.99■■■□□ 2.87
KRT5-210ENST00000552629 ABCA5Q8WWZ7 1642 aa32.99■■■□□ 2.87
KRT5-210ENST00000552629 IGF1RP08069 1367 aa32.95■■■□□ 2.87
KRT5-210ENST00000552629 EIF4G3O43432 1585 aaKnown RBP32.89■■■□□ 2.86
KRT5-210ENST00000552629 PBRM1Q86U86 1689 aa32.83■■■□□ 2.85
KRT5-210ENST00000552629 ERICH3Q5RHP9 1530 aa32.81■■■□□ 2.84
KRT5-210ENST00000552629 KIF21BO75037 1637 aa32.8■■■□□ 2.84
KRT5-210ENST00000552629 PRXQ9BXM0 1461 aa32.8■■■□□ 2.84
KRT5-210ENST00000552629 CARMIL1Q5VZK9 1371 aa32.8■■■□□ 2.84
KRT5-210ENST00000552629 GRIN2BQ13224 1484 aa32.79■■■□□ 2.84
KRT5-210ENST00000552629 RAPGEF2Q9Y4G8 1499 aa32.79■■■□□ 2.84
KRT5-210ENST00000552629 GOLGA3Q08378 1498 aa32.76■■■□□ 2.83
KRT5-210ENST00000552629 UBTFP17480 764 aaKnown RBP32.75■■■□□ 2.83
KRT5-210ENST00000552629 CUL7Q14999 1698 aa32.72■■■□□ 2.83
KRT5-210ENST00000552629 SNAPC4Q5SXM2 1469 aa32.67■■■□□ 2.82
KRT5-210ENST00000552629 ADAMTS12P58397 1594 aa32.61■■■□□ 2.81
KRT5-210ENST00000552629 FHAD1B1AJZ9 1412 aa32.6■■■□□ 2.81
KRT5-210ENST00000552629 MAGI1Q96QZ7 1491 aaPredicted RBP32.56■■■□□ 2.8
KRT5-210ENST00000552629 FBLN2P98095 1184 aa32.53■■■□□ 2.8
KRT5-210ENST00000552629 TNIKQ9UKE5 1360 aa32.53■■■□□ 2.8
KRT5-210ENST00000552629 RANGAP1P46060 587 aaPredicted RBP32.48■■■□□ 2.79
KRT5-210ENST00000552629 CHMP7Q8WUX9 453 aaPredicted RBP32.48■■■□□ 2.79
KRT5-210ENST00000552629 SYNJ2O15056 1496 aa32.45■■■□□ 2.79
KRT5-210ENST00000552629 GRIN2AQ12879 1464 aa32.39■■■□□ 2.78
KRT5-210ENST00000552629 CEP162Q5TB80 1403 aa32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms