RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 AEBP2Q6ZN18 517 aaPredicted RBP22.6■■□□□ 1.21
CCDC59-207ENST00000552606 NISCHQ9Y2I1 1504 aa22.26■■□□□ 1.15
CCDC59-207ENST00000552606 CHIC1Q5VXU3 224 aa21.18■□□□□ 0.98
CCDC59-207ENST00000552606 CCDC180Q9P1Z9 1646 aa19.86■□□□□ 0.77
CCDC59-207ENST00000552606 SENP3Q9H4L4 574 aaPredicted RBP19.41■□□□□ 0.7
CCDC59-207ENST00000552606 ABCC9O60706 1549 aa19.07■□□□□ 0.64
CCDC59-207ENST00000552606 PHF23Q9BUL5 403 aaPredicted RBP19.07■□□□□ 0.64
CCDC59-207ENST00000552606 ZCCHC6Q5VYS8 1495 aaKnown RBP18.63■□□□□ 0.57
CCDC59-207ENST00000552606 NACADO15069 1562 aa18.52■□□□□ 0.56
CCDC59-207ENST00000552606 RB1CC1Q8TDY2 1594 aa18.5■□□□□ 0.55
CCDC59-207ENST00000552606 MYO15BQ96JP2 1530 aa18.49■□□□□ 0.55
CCDC59-207ENST00000552606 DCAF1Q9Y4B6 1507 aa18.48■□□□□ 0.55
CCDC59-207ENST00000552606 UNC13AQ9UPW8 1703 aa18.28■□□□□ 0.52
CCDC59-207ENST00000552606 DCAF8L2P0C7V8 631 aa18.21■□□□□ 0.51
CCDC59-207ENST00000552606 FOXD1Q16676 465 aa18.14■□□□□ 0.49
CCDC59-207ENST00000552606 SCRIBQ14160 1630 aa18.04■□□□□ 0.48
CCDC59-207ENST00000552606 BICRAQ9NZM4 1560 aa18■□□□□ 0.47
CCDC59-207ENST00000552606 SHROOM4Q9ULL8 1493 aa17.8■□□□□ 0.44
CCDC59-207ENST00000552606 PABPN1Q86U42 306 aaKnown RBP eCLIP17.73■□□□□ 0.43
CCDC59-207ENST00000552606 POTEDQ86YR6 584 aa17.71■□□□□ 0.43
CCDC59-207ENST00000552606 EIF4G1Q04637 1599 aaKnown RBP17.46■□□□□ 0.39
CCDC59-207ENST00000552606 CC2D2AQ9P2K1 1620 aa17.36■□□□□ 0.37
CCDC59-207ENST00000552606 SMARCA4P51532 1647 aa17.3■□□□□ 0.36
CCDC59-207ENST00000552606 CECR2Q9BXF3 1484 aa17.29■□□□□ 0.36
CCDC59-207ENST00000552606 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
CCDC59-207ENST00000552606 BAZ1AQ9NRL2 1556 aaPredicted RBP17.25■□□□□ 0.35
CCDC59-207ENST00000552606 MSH5O43196 834 aa17.21■□□□□ 0.35
CCDC59-207ENST00000552606 MROH2BQ7Z745 1585 aa17.15■□□□□ 0.34
CCDC59-207ENST00000552606 PEG3Q9GZU2 1588 aa17.15■□□□□ 0.34
CCDC59-207ENST00000552606 SMARCA2P51531 1590 aa17.1■□□□□ 0.33
CCDC59-207ENST00000552606 ATAD2BQ9ULI0 1458 aa17.07■□□□□ 0.32
CCDC59-207ENST00000552606 HMGXB3Q12766 1538 aa17.06■□□□□ 0.32
CCDC59-207ENST00000552606 NCAPD3P42695 1498 aa17.03■□□□□ 0.32
CCDC59-207ENST00000552606 WIZO95785 1651 aa17.03■□□□□ 0.32
CCDC59-207ENST00000552606 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.31
CCDC59-207ENST00000552606 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
CCDC59-207ENST00000552606 PIAS4Q8N2W9 510 aaPredicted RBP16.87■□□□□ 0.29
CCDC59-207ENST00000552606 TOP2AP11388 1531 aaKnown RBP16.85■□□□□ 0.29
CCDC59-207ENST00000552606 LAMC3Q9Y6N6 1575 aa16.63■□□□□ 0.25
CCDC59-207ENST00000552606 PRDM2Q13029 1718 aa16.62■□□□□ 0.25
CCDC59-207ENST00000552606 NESP48681 1621 aa16.59■□□□□ 0.25
CCDC59-207ENST00000552606 CCDC88BA6NC98 1476 aa16.56■□□□□ 0.24
CCDC59-207ENST00000552606 KIF21AQ7Z4S6 1674 aa16.53■□□□□ 0.24
CCDC59-207ENST00000552606 PLPPR3Q6T4P5 718 aa16.53■□□□□ 0.24
CCDC59-207ENST00000552606 PPP6R1Q9UPN7 881 aa16.52■□□□□ 0.24
CCDC59-207ENST00000552606 CFTRP13569 1480 aa16.49■□□□□ 0.23
CCDC59-207ENST00000552606 CADPSQ9ULU8 1353 aa16.49■□□□□ 0.23
CCDC59-207ENST00000552606 SUPT5HO00267 1087 aaKnown RBP16.47■□□□□ 0.23
CCDC59-207ENST00000552606 ADRA2BP18089 450 aa16.47■□□□□ 0.23
CCDC59-207ENST00000552606 THOC2Q8NI27 1593 aaKnown RBP16.43■□□□□ 0.22
CCDC59-207ENST00000552606 ERCC6Q03468 1493 aa16.39■□□□□ 0.21
CCDC59-207ENST00000552606 PDS5BQ9NTI5 1447 aa16.38■□□□□ 0.21
CCDC59-207ENST00000552606 FANCD2Q9BXW9 1451 aa16.35■□□□□ 0.21
CCDC59-207ENST00000552606 CEP164Q9UPV0 1460 aa16.33■□□□□ 0.2
CCDC59-207ENST00000552606 WDR62O43379 1518 aa16.29■□□□□ 0.2
CCDC59-207ENST00000552606 MRC2Q9UBG0 1479 aa16.28■□□□□ 0.2
CCDC59-207ENST00000552606 CUX2O14529 1486 aa16.24■□□□□ 0.19
CCDC59-207ENST00000552606 URB2Q14146 1524 aaKnown RBP16.22■□□□□ 0.19
CCDC59-207ENST00000552606 DNMBPQ6XZF7 1577 aa16.17■□□□□ 0.18
CCDC59-207ENST00000552606 TOPBP1Q92547 1522 aa16.14■□□□□ 0.18
CCDC59-207ENST00000552606 CUX1P39880 1505 aa16.1■□□□□ 0.17
CCDC59-207ENST00000552606 ABCC8Q09428 1581 aa16.1■□□□□ 0.17
CCDC59-207ENST00000552606 BIVM-ERCC5R4GMW8 1640 aa16.09■□□□□ 0.17
CCDC59-207ENST00000552606 SYNJ1O43426 1573 aa16.05■□□□□ 0.16
CCDC59-207ENST00000552606 WDR97A6NE52 1622 aa16.04■□□□□ 0.16
CCDC59-207ENST00000552606 TOP2BQ02880 1626 aa16.04■□□□□ 0.16
CCDC59-207ENST00000552606 TARBP1Q13395 1621 aaKnown RBP16.03■□□□□ 0.16
CCDC59-207ENST00000552606 POLA1P09884 1462 aaPredicted RBP16.01■□□□□ 0.15
CCDC59-207ENST00000552606 FGD5Q6ZNL6 1462 aa15.99■□□□□ 0.15
CCDC59-207ENST00000552606 WRNQ14191 1432 aaPredicted RBP eCLIP15.98■□□□□ 0.15
CCDC59-207ENST00000552606 IFT140Q96RY7 1462 aa15.97■□□□□ 0.15
CCDC59-207ENST00000552606 EIF4G3O43432 1585 aaKnown RBP15.94■□□□□ 0.14
CCDC59-207ENST00000552606 RAD54L2Q9Y4B4 1467 aa15.9■□□□□ 0.14
CCDC59-207ENST00000552606 ZNF608Q9ULD9 1512 aaPredicted RBP15.89■□□□□ 0.13
CCDC59-207ENST00000552606 ABCA5Q8WWZ7 1642 aa15.87■□□□□ 0.13
CCDC59-207ENST00000552606 PBRM1Q86U86 1689 aa15.86■□□□□ 0.13
CCDC59-207ENST00000552606 ABCA10Q8WWZ4 1543 aa15.86■□□□□ 0.13
CCDC59-207ENST00000552606 SOGA1O94964 1423 aa15.85■□□□□ 0.13
CCDC59-207ENST00000552606 AQRO60306 1485 aaKnown RBP eCLIP15.76■□□□□ 0.11
CCDC59-207ENST00000552606 CHD1O14646 1710 aa15.75■□□□□ 0.11
CCDC59-207ENST00000552606 GAPVD1Q14C86 1478 aa15.72■□□□□ 0.11
CCDC59-207ENST00000552606 TDRD9Q8NDG6 1382 aaKnown RBP15.72■□□□□ 0.11
CCDC59-207ENST00000552606 GRIN2BQ13224 1484 aa15.7■□□□□ 0.1
CCDC59-207ENST00000552606 ADAMTS12P58397 1594 aa15.7■□□□□ 0.1
CCDC59-207ENST00000552606 SNAPC4Q5SXM2 1469 aa15.69■□□□□ 0.1
CCDC59-207ENST00000552606 ERICH3Q5RHP9 1530 aa15.68■□□□□ 0.1
CCDC59-207ENST00000552606 MAGI1Q96QZ7 1491 aaPredicted RBP15.68■□□□□ 0.1
CCDC59-207ENST00000552606 CUL7Q14999 1698 aa15.63■□□□□ 0.09
CCDC59-207ENST00000552606 KIF27Q86VH2 1401 aa15.6■□□□□ 0.09
CCDC59-207ENST00000552606 SYNJ2O15056 1496 aa15.59■□□□□ 0.09
CCDC59-207ENST00000552606 RUSC2Q8N2Y8 1516 aa15.55■□□□□ 0.08
CCDC59-207ENST00000552606 TRIM41Q8WV44 630 aa15.55■□□□□ 0.08
CCDC59-207ENST00000552606 FHAD1B1AJZ9 1412 aa15.54■□□□□ 0.08
CCDC59-207ENST00000552606 GRIN2AQ12879 1464 aa15.53■□□□□ 0.08
CCDC59-207ENST00000552606 CLASP1Q7Z460 1538 aa15.53■□□□□ 0.08
CCDC59-207ENST00000552606 CEP170Q5SW79 1584 aa15.51■□□□□ 0.07
CCDC59-207ENST00000552606 IGF1RP08069 1367 aa15.49■□□□□ 0.07
CCDC59-207ENST00000552606 NUP160Q12769 1436 aa15.47■□□□□ 0.07
CCDC59-207ENST00000552606 EEA1Q15075 1411 aa15.44■□□□□ 0.06
CCDC59-207ENST00000552606 SHROOM2Q13796 1616 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms