RNA–Protein interactions for RNA: ENST00000552521.5

TWF1-211, Transcript of twinfilin actin binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene TWF1, Length 3,012 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWF1-211ENST00000552521 NISCHQ9Y2I1 1504 aa21.88■■□□□ 1.09
TWF1-211ENST00000552521 CCDC180Q9P1Z9 1646 aa18.82■□□□□ 0.6
TWF1-211ENST00000552521 ZCCHC6Q5VYS8 1495 aaKnown RBP18.41■□□□□ 0.54
TWF1-211ENST00000552521 SHROOM4Q9ULL8 1493 aa18.3■□□□□ 0.52
TWF1-211ENST00000552521 DCAF8L2P0C7V8 631 aa18.29■□□□□ 0.52
TWF1-211ENST00000552521 DCAF1Q9Y4B6 1507 aa17.94■□□□□ 0.46
TWF1-211ENST00000552521 ABCC9O60706 1549 aa17.92■□□□□ 0.46
TWF1-211ENST00000552521 SUPT5HO00267 1087 aaKnown RBP17.68■□□□□ 0.42
TWF1-211ENST00000552521 MYO15BQ96JP2 1530 aa17.61■□□□□ 0.41
TWF1-211ENST00000552521 SCRIBQ14160 1630 aa17.59■□□□□ 0.41
TWF1-211ENST00000552521 NACADO15069 1562 aa17.53■□□□□ 0.4
TWF1-211ENST00000552521 RB1CC1Q8TDY2 1594 aa17.36■□□□□ 0.37
TWF1-211ENST00000552521 CECR2Q9BXF3 1484 aa17.13■□□□□ 0.33
TWF1-211ENST00000552521 RSF1Q96T23 1441 aaPredicted RBP17.13■□□□□ 0.33
TWF1-211ENST00000552521 UNC13AQ9UPW8 1703 aa17.09■□□□□ 0.33
TWF1-211ENST00000552521 PABPN1Q86U42 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
TWF1-211ENST00000552521 MROH2BQ7Z745 1585 aa17■□□□□ 0.31
TWF1-211ENST00000552521 BICRAQ9NZM4 1560 aa16.93■□□□□ 0.3
TWF1-211ENST00000552521 CHIC1Q5VXU3 224 aa16.92■□□□□ 0.3
TWF1-211ENST00000552521 WIZO95785 1651 aa16.87■□□□□ 0.29
TWF1-211ENST00000552521 BAZ1AQ9NRL2 1556 aaPredicted RBP16.84■□□□□ 0.29
TWF1-211ENST00000552521 SMARCA4P51532 1647 aa16.77■□□□□ 0.28
TWF1-211ENST00000552521 TOP2AP11388 1531 aaKnown RBP16.59■□□□□ 0.25
TWF1-211ENST00000552521 CCDC88BA6NC98 1476 aa16.52■□□□□ 0.23
TWF1-211ENST00000552521 SMARCA2P51531 1590 aa16.49■□□□□ 0.23
TWF1-211ENST00000552521 TRIM41Q8WV44 630 aa16.49■□□□□ 0.23
TWF1-211ENST00000552521 ATAD2BQ9ULI0 1458 aa16.48■□□□□ 0.23
TWF1-211ENST00000552521 PEG3Q9GZU2 1588 aa16.47■□□□□ 0.23
TWF1-211ENST00000552521 LOC105371045A0A1W2PR82 267 aa16.43■□□□□ 0.22
TWF1-211ENST00000552521 EIF4G1Q04637 1599 aaKnown RBP16.42■□□□□ 0.22
TWF1-211ENST00000552521 BAZ1BQ9UIG0 1483 aaKnown RBP16.4■□□□□ 0.22
TWF1-211ENST00000552521 FAM9AQ8IZU1 332 aaPredicted RBP16.36■□□□□ 0.21
TWF1-211ENST00000552521 ABCC8Q09428 1581 aa16.32■□□□□ 0.2
TWF1-211ENST00000552521 EHMT2Q96KQ7 1210 aa16.26■□□□□ 0.19
TWF1-211ENST00000552521 NCAPD3P42695 1498 aa16.23■□□□□ 0.19
TWF1-211ENST00000552521 HMGXB3Q12766 1538 aa16.19■□□□□ 0.18
TWF1-211ENST00000552521 CC2D2AQ9P2K1 1620 aa16.13■□□□□ 0.17
TWF1-211ENST00000552521 WRNQ14191 1432 aaPredicted RBP eCLIP16.09■□□□□ 0.17
TWF1-211ENST00000552521 SOGA1O94964 1423 aa16.07■□□□□ 0.16
TWF1-211ENST00000552521 SYNJ1O43426 1573 aa16.05■□□□□ 0.16
TWF1-211ENST00000552521 RUSC2Q8N2Y8 1516 aa16.02■□□□□ 0.16
TWF1-211ENST00000552521 CFTRP13569 1480 aa15.97■□□□□ 0.15
TWF1-211ENST00000552521 DNAJC5BQ9UF47 199 aa15.94■□□□□ 0.14
TWF1-211ENST00000552521 CADPSQ9ULU8 1353 aa15.89■□□□□ 0.13
TWF1-211ENST00000552521 CSRNP3Q8WYN3 585 aa15.89■□□□□ 0.13
TWF1-211ENST00000552521 TOP2BQ02880 1626 aa15.87■□□□□ 0.13
TWF1-211ENST00000552521 PCGF6Q9BYE7 350 aa15.87■□□□□ 0.13
TWF1-211ENST00000552521 CUX1P39880 1505 aa15.86■□□□□ 0.13
TWF1-211ENST00000552521 EEA1Q15075 1411 aa15.83■□□□□ 0.12
TWF1-211ENST00000552521 NESP48681 1621 aa15.82■□□□□ 0.12
TWF1-211ENST00000552521 BIVM-ERCC5R4GMW8 1640 aa15.81■□□□□ 0.12
TWF1-211ENST00000552521 UBTFP17480 764 aaKnown RBP15.78■□□□□ 0.12
TWF1-211ENST00000552521 PRDM2Q13029 1718 aa15.76■□□□□ 0.11
TWF1-211ENST00000552521 FANCD2Q9BXW9 1451 aa15.74■□□□□ 0.11
TWF1-211ENST00000552521 PPARGC1BQ86YN6 1023 aaKnown RBP15.73■□□□□ 0.11
TWF1-211ENST00000552521 CEP162Q5TB80 1403 aa15.72■□□□□ 0.11
TWF1-211ENST00000552521 GOLGA3Q08378 1498 aa15.72■□□□□ 0.11
TWF1-211ENST00000552521 TNIKQ9UKE5 1360 aa15.71■□□□□ 0.11
TWF1-211ENST00000552521 RAPGEF2Q9Y4G8 1499 aa15.7■□□□□ 0.1
TWF1-211ENST00000552521 CEP164Q9UPV0 1460 aa15.69■□□□□ 0.1
TWF1-211ENST00000552521 KIF21BO75037 1637 aa15.66■□□□□ 0.1
TWF1-211ENST00000552521 FGD5Q6ZNL6 1462 aa15.65■□□□□ 0.1
TWF1-211ENST00000552521 RANGAP1P46060 587 aaPredicted RBP15.65■□□□□ 0.1
TWF1-211ENST00000552521 TRIM26Q12899 539 aaPredicted RBP15.65■□□□□ 0.1
TWF1-211ENST00000552521 KIF27Q86VH2 1401 aa15.63■□□□□ 0.09
TWF1-211ENST00000552521 LAMC3Q9Y6N6 1575 aa15.61■□□□□ 0.09
TWF1-211ENST00000552521 CUX2O14529 1486 aa15.61■□□□□ 0.09
TWF1-211ENST00000552521 PRXQ9BXM0 1461 aa15.59■□□□□ 0.09
TWF1-211ENST00000552521 TTBK1Q5TCY1 1321 aaPredicted RBP15.58■□□□□ 0.09
TWF1-211ENST00000552521 TOPBP1Q92547 1522 aa15.58■□□□□ 0.08
TWF1-211ENST00000552521 RAD54L2Q9Y4B4 1467 aa15.57■□□□□ 0.08
TWF1-211ENST00000552521 DNMBPQ6XZF7 1577 aa15.56■□□□□ 0.08
TWF1-211ENST00000552521 URB2Q14146 1524 aaKnown RBP15.55■□□□□ 0.08
TWF1-211ENST00000552521 POLA1P09884 1462 aaPredicted RBP15.55■□□□□ 0.08
TWF1-211ENST00000552521 CLIP1P30622 1438 aa15.53■□□□□ 0.08
TWF1-211ENST00000552521 PDS5BQ9NTI5 1447 aa15.53■□□□□ 0.08
TWF1-211ENST00000552521 IGF1RP08069 1367 aa15.53■□□□□ 0.08
TWF1-211ENST00000552521 KIF21AQ7Z4S6 1674 aa15.52■□□□□ 0.07
TWF1-211ENST00000552521 ERICH3Q5RHP9 1530 aa15.5■□□□□ 0.07
TWF1-211ENST00000552521 HRCP23327 699 aa15.46■□□□□ 0.07
TWF1-211ENST00000552521 ABCA10Q8WWZ4 1543 aa15.45■□□□□ 0.06
TWF1-211ENST00000552521 CARMIL1Q5VZK9 1371 aa15.44■□□□□ 0.06
TWF1-211ENST00000552521 TDRD9Q8NDG6 1382 aaKnown RBP15.42■□□□□ 0.06
TWF1-211ENST00000552521 VPS8Q8N3P4 1428 aa15.39■□□□□ 0.05
TWF1-211ENST00000552521 ARAP1Q96P48 1450 aa15.36■□□□□ 0.05
TWF1-211ENST00000552521 WDR97A6NE52 1622 aa15.34■□□□□ 0.05
TWF1-211ENST00000552521 MRC2Q9UBG0 1479 aa15.33■□□□□ 0.04
TWF1-211ENST00000552521 ARHGAP35Q9NRY4 1499 aa15.32■□□□□ 0.04
TWF1-211ENST00000552521 GAPVD1Q14C86 1478 aa15.31■□□□□ 0.04
TWF1-211ENST00000552521 TARBP1Q13395 1621 aaKnown RBP15.3■□□□□ 0.04
TWF1-211ENST00000552521 ABCA5Q8WWZ7 1642 aa15.3■□□□□ 0.04
TWF1-211ENST00000552521 ERCC6Q03468 1493 aa15.28■□□□□ 0.04
TWF1-211ENST00000552521 AQRO60306 1485 aaKnown RBP eCLIP15.28■□□□□ 0.046e-7■■■□□ 17.2
TWF1-211ENST00000552521 P3H3Q8IVL6 736 aa15.27■□□□□ 0.04
TWF1-211ENST00000552521 APLP2Q06481 763 aa15.27■□□□□ 0.03
TWF1-211ENST00000552521 CUL7Q14999 1698 aa15.25■□□□□ 0.03
TWF1-211ENST00000552521 ZNF608Q9ULD9 1512 aaPredicted RBP15.23■□□□□ 0.03
TWF1-211ENST00000552521 KANK4Q5T7N3 995 aaPredicted RBP15.23■□□□□ 0.03
TWF1-211ENST00000552521 WDR62O43379 1518 aa15.23■□□□□ 0.03
TWF1-211ENST00000552521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms