RNA–Protein interactions for RNA: ENST00000552214.1

PFKM-226, Transcript of phosphofructokinase, muscle, humanhuman

TSL 2

Gene PFKM, Length 425 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-226ENST00000552214 NISCHQ9Y2I1 1504 aa31.6■■■□□ 2.65
PFKM-226ENST00000552214 CCDC180Q9P1Z9 1646 aa28.07■■■□□ 2.08
PFKM-226ENST00000552214 ABCC9O60706 1549 aa27.32■■□□□ 1.96
PFKM-226ENST00000552214 DCAF8L2P0C7V8 631 aa26.57■■□□□ 1.84
PFKM-226ENST00000552214 RB1CC1Q8TDY2 1594 aa26.37■■□□□ 1.81
PFKM-226ENST00000552214 NACADO15069 1562 aa26.34■■□□□ 1.81
PFKM-226ENST00000552214 ZCCHC6Q5VYS8 1495 aaKnown RBP26.32■■□□□ 1.8
PFKM-226ENST00000552214 MYO15BQ96JP2 1530 aa26.15■■□□□ 1.78
PFKM-226ENST00000552214 DCAF1Q9Y4B6 1507 aa26.12■■□□□ 1.77
PFKM-226ENST00000552214 UNC13AQ9UPW8 1703 aa25.82■■□□□ 1.72
PFKM-226ENST00000552214 SCRIBQ14160 1630 aa25.65■■□□□ 1.7
PFKM-226ENST00000552214 PABPN1Q86U42 306 aaKnown RBP eCLIP25.58■■□□□ 1.69
PFKM-226ENST00000552214 BICRAQ9NZM4 1560 aa25.46■■□□□ 1.67
PFKM-226ENST00000552214 SHROOM4Q9ULL8 1493 aa25.21■■□□□ 1.63
PFKM-226ENST00000552214 DNAJC5BQ9UF47 199 aa24.85■■□□□ 1.57
PFKM-226ENST00000552214 EIF4G1Q04637 1599 aaKnown RBP24.83■■□□□ 1.57
PFKM-226ENST00000552214 CC2D2AQ9P2K1 1620 aa24.72■■□□□ 1.55
PFKM-226ENST00000552214 CECR2Q9BXF3 1484 aa24.59■■□□□ 1.53
PFKM-226ENST00000552214 BAZ1AQ9NRL2 1556 aaPredicted RBP24.52■■□□□ 1.52
PFKM-226ENST00000552214 SMARCA4P51532 1647 aa24.52■■□□□ 1.52
PFKM-226ENST00000552214 MROH2BQ7Z745 1585 aa24.36■■□□□ 1.49
PFKM-226ENST00000552214 SMARCA2P51531 1590 aa24.34■■□□□ 1.49
PFKM-226ENST00000552214 ATAD2BQ9ULI0 1458 aa24.31■■□□□ 1.48
PFKM-226ENST00000552214 NCAPD3P42695 1498 aa24.26■■□□□ 1.47
PFKM-226ENST00000552214 PEG3Q9GZU2 1588 aa24.2■■□□□ 1.47
PFKM-226ENST00000552214 BAZ1BQ9UIG0 1483 aaKnown RBP24.18■■□□□ 1.46
PFKM-226ENST00000552214 HMGXB3Q12766 1538 aa24.17■■□□□ 1.46
PFKM-226ENST00000552214 WIZO95785 1651 aa24.17■■□□□ 1.46
PFKM-226ENST00000552214 RSF1Q96T23 1441 aaPredicted RBP24.12■■□□□ 1.45
PFKM-226ENST00000552214 TOP2AP11388 1531 aaKnown RBP23.87■■□□□ 1.41
PFKM-226ENST00000552214 SUPT5HO00267 1087 aaKnown RBP23.82■■□□□ 1.4
PFKM-226ENST00000552214 AEBP2Q6ZN18 517 aaPredicted RBP23.78■■□□□ 1.4
PFKM-226ENST00000552214 NESP48681 1621 aa23.66■■□□□ 1.38
PFKM-226ENST00000552214 LAMC3Q9Y6N6 1575 aa23.65■■□□□ 1.38
PFKM-226ENST00000552214 CADPSQ9ULU8 1353 aa23.6■■□□□ 1.37
PFKM-226ENST00000552214 CCDC88BA6NC98 1476 aa23.6■■□□□ 1.37
PFKM-226ENST00000552214 ERCC6Q03468 1493 aa23.6■■□□□ 1.37
PFKM-226ENST00000552214 CHIC1Q5VXU3 224 aa23.56■■□□□ 1.36
PFKM-226ENST00000552214 PDS5BQ9NTI5 1447 aa23.5■■□□□ 1.35
PFKM-226ENST00000552214 CFTRP13569 1480 aa23.46■■□□□ 1.35
PFKM-226ENST00000552214 KIF21AQ7Z4S6 1674 aa23.46■■□□□ 1.35
PFKM-226ENST00000552214 PRDM2Q13029 1718 aa23.45■■□□□ 1.34
PFKM-226ENST00000552214 FANCD2Q9BXW9 1451 aa23.35■■□□□ 1.33
PFKM-226ENST00000552214 CEP164Q9UPV0 1460 aa23.31■■□□□ 1.32
PFKM-226ENST00000552214 THOC2Q8NI27 1593 aaKnown RBP23.24■■□□□ 1.31
PFKM-226ENST00000552214 MRC2Q9UBG0 1479 aa23.22■■□□□ 1.31
PFKM-226ENST00000552214 CUX2O14529 1486 aa23.2■■□□□ 1.3
PFKM-226ENST00000552214 WDR62O43379 1518 aa23.1■■□□□ 1.29
PFKM-226ENST00000552214 URB2Q14146 1524 aaKnown RBP23.06■■□□□ 1.28
PFKM-226ENST00000552214 ABCC8Q09428 1581 aa23.04■■□□□ 1.28
PFKM-226ENST00000552214 TOPBP1Q92547 1522 aa22.98■■□□□ 1.27
PFKM-226ENST00000552214 DNMBPQ6XZF7 1577 aa22.97■■□□□ 1.27
PFKM-226ENST00000552214 CUX1P39880 1505 aa22.84■■□□□ 1.25
PFKM-226ENST00000552214 IFT140Q96RY7 1462 aa22.8■■□□□ 1.24
PFKM-226ENST00000552214 WRNQ14191 1432 aaPredicted RBP eCLIP22.8■■□□□ 1.24
PFKM-226ENST00000552214 POLA1P09884 1462 aaPredicted RBP22.78■■□□□ 1.24
PFKM-226ENST00000552214 FGD5Q6ZNL6 1462 aa22.77■■□□□ 1.24
PFKM-226ENST00000552214 SOGA1O94964 1423 aa22.74■■□□□ 1.23
PFKM-226ENST00000552214 BIVM-ERCC5R4GMW8 1640 aa22.73■■□□□ 1.23
PFKM-226ENST00000552214 TOP2BQ02880 1626 aa22.72■■□□□ 1.23
PFKM-226ENST00000552214 RAD54L2Q9Y4B4 1467 aa22.7■■□□□ 1.22
PFKM-226ENST00000552214 SYNJ1O43426 1573 aa22.7■■□□□ 1.22
PFKM-226ENST00000552214 TARBP1Q13395 1621 aaKnown RBP22.7■■□□□ 1.22
PFKM-226ENST00000552214 ZNF608Q9ULD9 1512 aaPredicted RBP22.65■■□□□ 1.22
PFKM-226ENST00000552214 EIF4G3O43432 1585 aaKnown RBP22.6■■□□□ 1.21
PFKM-226ENST00000552214 TDRD9Q8NDG6 1382 aaKnown RBP22.59■■□□□ 1.21
PFKM-226ENST00000552214 AQRO60306 1485 aaKnown RBP eCLIP22.59■■□□□ 1.21
PFKM-226ENST00000552214 WDR97A6NE52 1622 aa22.56■■□□□ 1.2
PFKM-226ENST00000552214 ABCA10Q8WWZ4 1543 aa22.53■■□□□ 1.2
PFKM-226ENST00000552214 TRIM41Q8WV44 630 aa22.48■■□□□ 1.19
PFKM-226ENST00000552214 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
PFKM-226ENST00000552214 PBRM1Q86U86 1689 aa22.47■■□□□ 1.19
PFKM-226ENST00000552214 GRIN2BQ13224 1484 aa22.44■■□□□ 1.18
PFKM-226ENST00000552214 ABCA5Q8WWZ7 1642 aa22.43■■□□□ 1.18
PFKM-226ENST00000552214 FBLN2P98095 1184 aa22.42■■□□□ 1.18
PFKM-226ENST00000552214 SNAPC4Q5SXM2 1469 aa22.37■■□□□ 1.17
PFKM-226ENST00000552214 CHD1O14646 1710 aa22.37■■□□□ 1.17
PFKM-226ENST00000552214 OSCARQ8IYS5 282 aa22.36■■□□□ 1.17
PFKM-226ENST00000552214 MAGI1Q96QZ7 1491 aaPredicted RBP22.34■■□□□ 1.17
PFKM-226ENST00000552214 CHMP7Q8WUX9 453 aaPredicted RBP22.34■■□□□ 1.17
PFKM-226ENST00000552214 KIF27Q86VH2 1401 aa22.33■■□□□ 1.17
PFKM-226ENST00000552214 DNAJC5Q9H3Z4 198 aa22.31■■□□□ 1.16
PFKM-226ENST00000552214 ERICH3Q5RHP9 1530 aa22.29■■□□□ 1.16
PFKM-226ENST00000552214 SYNJ2O15056 1496 aa22.26■■□□□ 1.15
PFKM-226ENST00000552214 FHAD1B1AJZ9 1412 aa22.21■■□□□ 1.15
PFKM-226ENST00000552214 ADAMTS12P58397 1594 aa22.21■■□□□ 1.15
PFKM-226ENST00000552214 IGF1RP08069 1367 aa22.17■■□□□ 1.14
PFKM-226ENST00000552214 CUL7Q14999 1698 aa22.17■■□□□ 1.14
PFKM-226ENST00000552214 GRIN2AQ12879 1464 aa22.13■■□□□ 1.13
PFKM-226ENST00000552214 RUSC2Q8N2Y8 1516 aa22.12■■□□□ 1.13
PFKM-226ENST00000552214 CARMIL1Q5VZK9 1371 aa22.1■■□□□ 1.13
PFKM-226ENST00000552214 FAM9AQ8IZU1 332 aaPredicted RBP22.03■■□□□ 1.12
PFKM-226ENST00000552214 CEP170Q5SW79 1584 aa22■■□□□ 1.11
PFKM-226ENST00000552214 EEA1Q15075 1411 aa22■■□□□ 1.11
PFKM-226ENST00000552214 CLASP1Q7Z460 1538 aa22■■□□□ 1.11
PFKM-226ENST00000552214 CSRNP3Q8WYN3 585 aa21.99■■□□□ 1.11
PFKM-226ENST00000552214 RAPGEF2Q9Y4G8 1499 aa21.98■■□□□ 1.11
PFKM-226ENST00000552214 NUP160Q12769 1436 aa21.97■■□□□ 1.11
PFKM-226ENST00000552214 RIMBP3CA6NJZ7 1639 aa21.94■■□□□ 1.1
PFKM-226ENST00000552214 RIMBP3BA6NNM3 1639 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms