RNA–Protein interactions for RNA: ENST00000552187.1

TMEM106C-218, Transcript of transmembrane protein 106C, humanhuman

TSL 2

Gene TMEM106C, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-218ENST00000552187 NISCHQ9Y2I1 1504 aa20.85■□□□□ 0.93
TMEM106C-218ENST00000552187 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
TMEM106C-218ENST00000552187 CHIC1Q5VXU3 224 aa20.28■□□□□ 0.84
TMEM106C-218ENST00000552187 ABCC9O60706 1549 aa19.99■□□□□ 0.79
TMEM106C-218ENST00000552187 DNAJC5BQ9UF47 199 aa19.53■□□□□ 0.72
TMEM106C-218ENST00000552187 CCDC180Q9P1Z9 1646 aa19.03■□□□□ 0.64
TMEM106C-218ENST00000552187 RB1CC1Q8TDY2 1594 aa18.57■□□□□ 0.56
TMEM106C-218ENST00000552187 DNAJC5Q9H3Z4 198 aa18.54■□□□□ 0.56
TMEM106C-218ENST00000552187 PABPN1Q86U42 306 aaKnown RBP eCLIP18.5■□□□□ 0.55
TMEM106C-218ENST00000552187 NACADO15069 1562 aa18.22■□□□□ 0.51
TMEM106C-218ENST00000552187 UNC13AQ9UPW8 1703 aa18.12■□□□□ 0.49
TMEM106C-218ENST00000552187 CECR2Q9BXF3 1484 aa18.08■□□□□ 0.49
TMEM106C-218ENST00000552187 BICRAQ9NZM4 1560 aa18.08■□□□□ 0.48
TMEM106C-218ENST00000552187 DCAF8L2P0C7V8 631 aa18.07■□□□□ 0.48
TMEM106C-218ENST00000552187 CC2D2AQ9P2K1 1620 aa17.96■□□□□ 0.47
TMEM106C-218ENST00000552187 PHF23Q9BUL5 403 aaPredicted RBP17.82■□□□□ 0.44
TMEM106C-218ENST00000552187 EIF4G1Q04637 1599 aaKnown RBP17.71■□□□□ 0.43
TMEM106C-218ENST00000552187 SHROOM4Q9ULL8 1493 aa17.71■□□□□ 0.43
TMEM106C-218ENST00000552187 MYO15BQ96JP2 1530 aa17.67■□□□□ 0.42
TMEM106C-218ENST00000552187 SENP3Q9H4L4 574 aaPredicted RBP17.6■□□□□ 0.41
TMEM106C-218ENST00000552187 CUX2O14529 1486 aa17.53■□□□□ 0.4
TMEM106C-218ENST00000552187 TRIM41Q8WV44 630 aa17.43■□□□□ 0.38
TMEM106C-218ENST00000552187 SCRIBQ14160 1630 aa17.38■□□□□ 0.37
TMEM106C-218ENST00000552187 ERCC6Q03468 1493 aa17.32■□□□□ 0.36
TMEM106C-218ENST00000552187 DCAF1Q9Y4B6 1507 aa17.12■□□□□ 0.33
TMEM106C-218ENST00000552187 ZCCHC6Q5VYS8 1495 aaKnown RBP17.11■□□□□ 0.33
TMEM106C-218ENST00000552187 NESP48681 1621 aa16.92■□□□□ 0.3
TMEM106C-218ENST00000552187 THOC2Q8NI27 1593 aaKnown RBP16.87■□□□□ 0.29
TMEM106C-218ENST00000552187 NCAPD3P42695 1498 aa16.86■□□□□ 0.29
TMEM106C-218ENST00000552187 SMARCA2P51531 1590 aa16.77■□□□□ 0.27
TMEM106C-218ENST00000552187 ATAD2BQ9ULI0 1458 aa16.7■□□□□ 0.26
TMEM106C-218ENST00000552187 HMGXB3Q12766 1538 aa16.64■□□□□ 0.25
TMEM106C-218ENST00000552187 OSCARQ8IYS5 282 aa16.62■□□□□ 0.25
TMEM106C-218ENST00000552187 BAZ1AQ9NRL2 1556 aaPredicted RBP16.61■□□□□ 0.25
TMEM106C-218ENST00000552187 KIF21AQ7Z4S6 1674 aa16.61■□□□□ 0.25
TMEM106C-218ENST00000552187 LAMC3Q9Y6N6 1575 aa16.6■□□□□ 0.25
TMEM106C-218ENST00000552187 PDS5BQ9NTI5 1447 aa16.56■□□□□ 0.24
TMEM106C-218ENST00000552187 BAZ1BQ9UIG0 1483 aaKnown RBP16.5■□□□□ 0.23
TMEM106C-218ENST00000552187 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
TMEM106C-218ENST00000552187 MRC2Q9UBG0 1479 aa16.48■□□□□ 0.23
TMEM106C-218ENST00000552187 RIMBP3CA6NJZ7 1639 aa16.48■□□□□ 0.23
TMEM106C-218ENST00000552187 RIMBP3BA6NNM3 1639 aa16.48■□□□□ 0.23
TMEM106C-218ENST00000552187 RIMBP3Q9UFD9 1639 aa16.48■□□□□ 0.23
TMEM106C-218ENST00000552187 SMARCA4P51532 1647 aa16.45■□□□□ 0.22
TMEM106C-218ENST00000552187 WDR62O43379 1518 aa16.45■□□□□ 0.22
TMEM106C-218ENST00000552187 TRHP20396 242 aaPredicted RBP16.43■□□□□ 0.22
TMEM106C-218ENST00000552187 ARHGEF11O15085 1522 aa16.35■□□□□ 0.21
TMEM106C-218ENST00000552187 CADPSQ9ULU8 1353 aa16.33■□□□□ 0.2
TMEM106C-218ENST00000552187 CYB5RLQ6IPT4 315 aa16.32■□□□□ 0.2
TMEM106C-218ENST00000552187 FOXD1Q16676 465 aa16.3■□□□□ 0.2
TMEM106C-218ENST00000552187 PEG3Q9GZU2 1588 aa16.26■□□□□ 0.19
TMEM106C-218ENST00000552187 CEP164Q9UPV0 1460 aa16.24■□□□□ 0.19
TMEM106C-218ENST00000552187 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
TMEM106C-218ENST00000552187 ARAP1Q96P48 1450 aa16.15■□□□□ 0.18
TMEM106C-218ENST00000552187 MROH2BQ7Z745 1585 aa16.09■□□□□ 0.17
TMEM106C-218ENST00000552187 URB2Q14146 1524 aaKnown RBP16.08■□□□□ 0.16
TMEM106C-218ENST00000552187 ZNF608Q9ULD9 1512 aaPredicted RBP16.04■□□□□ 0.16
TMEM106C-218ENST00000552187 ILDR1Q86SU0 546 aaPredicted RBP16.03■□□□□ 0.16
TMEM106C-218ENST00000552187 RSF1Q96T23 1441 aaPredicted RBP15.96■□□□□ 0.15
TMEM106C-218ENST00000552187 IFT140Q96RY7 1462 aa15.96■□□□□ 0.14
TMEM106C-218ENST00000552187 CFTRP13569 1480 aa15.94■□□□□ 0.14
TMEM106C-218ENST00000552187 CHD1O14646 1710 aa15.89■□□□□ 0.13
TMEM106C-218ENST00000552187 FBLN2P98095 1184 aa15.89■□□□□ 0.13
TMEM106C-218ENST00000552187 EIF4G3O43432 1585 aaKnown RBP15.87■□□□□ 0.13
TMEM106C-218ENST00000552187 WIZO95785 1651 aa15.83■□□□□ 0.12
TMEM106C-218ENST00000552187 AQRO60306 1485 aaKnown RBP eCLIP15.78■□□□□ 0.12
TMEM106C-218ENST00000552187 TOPBP1Q92547 1522 aa15.74■□□□□ 0.11
TMEM106C-218ENST00000552187 PPP6R1Q9UPN7 881 aa15.71■□□□□ 0.11
TMEM106C-218ENST00000552187 CLASP1Q7Z460 1538 aa15.71■□□□□ 0.11
TMEM106C-218ENST00000552187 ADRA2BP18089 450 aa15.68■□□□□ 0.1
TMEM106C-218ENST00000552187 TARBP1Q13395 1621 aaKnown RBP15.64■□□□□ 0.09
TMEM106C-218ENST00000552187 GAPVD1Q14C86 1478 aa15.64■□□□□ 0.09
TMEM106C-218ENST00000552187 PRDM2Q13029 1718 aa15.63■□□□□ 0.09
TMEM106C-218ENST00000552187 SYNJ1O43426 1573 aa15.62■□□□□ 0.09
TMEM106C-218ENST00000552187 ABCC8Q09428 1581 aa15.61■□□□□ 0.09
TMEM106C-218ENST00000552187 KDM4FA0A1W2PPD8 638 aa15.6■□□□□ 0.09
TMEM106C-218ENST00000552187 CHMP7Q8WUX9 453 aaPredicted RBP15.6■□□□□ 0.09
TMEM106C-218ENST00000552187 SNAPC4Q5SXM2 1469 aa15.59■□□□□ 0.09
TMEM106C-218ENST00000552187 DNMBPQ6XZF7 1577 aa15.58■□□□□ 0.09
TMEM106C-218ENST00000552187 TOP2AP11388 1531 aaKnown RBP15.58■□□□□ 0.08
TMEM106C-218ENST00000552187 TDRD9Q8NDG6 1382 aaKnown RBP15.56■□□□□ 0.08
TMEM106C-218ENST00000552187 POLA1P09884 1462 aaPredicted RBP15.53■□□□□ 0.08
TMEM106C-218ENST00000552187 RAD54L2Q9Y4B4 1467 aa15.52■□□□□ 0.07
TMEM106C-218ENST00000552187 MAGI1Q96QZ7 1491 aaPredicted RBP15.48■□□□□ 0.07
TMEM106C-218ENST00000552187 KIF13AQ9H1H9 1805 aa15.46■□□□□ 0.07
TMEM106C-218ENST00000552187 SYNJ2O15056 1496 aa15.46■□□□□ 0.06
TMEM106C-218ENST00000552187 SOGA1O94964 1423 aa15.45■□□□□ 0.06
TMEM106C-218ENST00000552187 ERCC6L2Q5T890 1561 aa15.44■□□□□ 0.06
TMEM106C-218ENST00000552187 CCDC88BA6NC98 1476 aa15.42■□□□□ 0.06
TMEM106C-218ENST00000552187 GRIN2BQ13224 1484 aa15.4■□□□□ 0.06
TMEM106C-218ENST00000552187 PIAS4Q8N2W9 510 aaPredicted RBP15.39■□□□□ 0.05
TMEM106C-218ENST00000552187 WDR97A6NE52 1622 aa15.38■□□□□ 0.05
TMEM106C-218ENST00000552187 FAM69CQ0P6D2 419 aa15.37■□□□□ 0.05
TMEM106C-218ENST00000552187 KDM6BO15054 1643 aa15.33■□□□□ 0.04
TMEM106C-218ENST00000552187 HECW2Q9P2P5 1572 aa15.32■□□□□ 0.04
TMEM106C-218ENST00000552187 FBXO41Q8TF61 875 aa15.32■□□□□ 0.04
TMEM106C-218ENST00000552187 FGD5Q6ZNL6 1462 aa15.32■□□□□ 0.04
TMEM106C-218ENST00000552187 ABCC10Q5T3U5 1492 aa15.31■□□□□ 0.04
TMEM106C-218ENST00000552187 CEP170Q5SW79 1584 aa15.3■□□□□ 0.04
TMEM106C-218ENST00000552187 ADGRL1O94910 1474 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms