RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 NISCHQ9Y2I1 1504 aa32.87■■■□□ 2.85
CACNB3-221ENST00000552022 ABCC9O60706 1549 aa30.43■■■□□ 2.46
CACNB3-221ENST00000552022 CCDC180Q9P1Z9 1646 aa29.77■■■□□ 2.36
CACNB3-221ENST00000552022 DNAJC5BQ9UF47 199 aa29.22■■■□□ 2.27
CACNB3-221ENST00000552022 RB1CC1Q8TDY2 1594 aa28.65■■■□□ 2.18
CACNB3-221ENST00000552022 NACADO15069 1562 aa28.29■■■□□ 2.12
CACNB3-221ENST00000552022 PABPN1Q86U42 306 aaKnown RBP eCLIP28.25■■■□□ 2.11
CACNB3-221ENST00000552022 UNC13AQ9UPW8 1703 aa28.1■■■□□ 2.09
CACNB3-221ENST00000552022 DCAF8L2P0C7V8 631 aa28.04■■■□□ 2.08
CACNB3-221ENST00000552022 BICRAQ9NZM4 1560 aa27.9■■■□□ 2.06
CACNB3-221ENST00000552022 MYO15BQ96JP2 1530 aa27.67■■■□□ 2.02
CACNB3-221ENST00000552022 CECR2Q9BXF3 1484 aa27.47■■□□□ 1.99
CACNB3-221ENST00000552022 CC2D2AQ9P2K1 1620 aa27.47■■□□□ 1.99
CACNB3-221ENST00000552022 SHROOM4Q9ULL8 1493 aa27.35■■□□□ 1.97
CACNB3-221ENST00000552022 DNAJC5Q9H3Z4 198 aa27.27■■□□□ 1.96
CACNB3-221ENST00000552022 EIF4G1Q04637 1599 aaKnown RBP27.23■■□□□ 1.95
CACNB3-221ENST00000552022 SCRIBQ14160 1630 aa27.08■■□□□ 1.93
CACNB3-221ENST00000552022 DCAF1Q9Y4B6 1507 aa27.08■■□□□ 1.93
CACNB3-221ENST00000552022 ZCCHC6Q5VYS8 1495 aaKnown RBP27.07■■□□□ 1.92
CACNB3-221ENST00000552022 CUX2O14529 1486 aa26.47■■□□□ 1.83
CACNB3-221ENST00000552022 ERCC6Q03468 1493 aa26.28■■□□□ 1.8
CACNB3-221ENST00000552022 NCAPD3P42695 1498 aa26.15■■□□□ 1.78
CACNB3-221ENST00000552022 NESP48681 1621 aa25.98■■□□□ 1.75
CACNB3-221ENST00000552022 ATAD2BQ9ULI0 1458 aa25.98■■□□□ 1.75
CACNB3-221ENST00000552022 HMGXB3Q12766 1538 aa25.87■■□□□ 1.73
CACNB3-221ENST00000552022 SMARCA2P51531 1590 aa25.83■■□□□ 1.73
CACNB3-221ENST00000552022 THOC2Q8NI27 1593 aaKnown RBP25.82■■□□□ 1.72
CACNB3-221ENST00000552022 SMARCA4P51532 1647 aa25.78■■□□□ 1.72
CACNB3-221ENST00000552022 TRIM41Q8WV44 630 aa25.77■■□□□ 1.72
CACNB3-221ENST00000552022 BAZ1BQ9UIG0 1483 aaKnown RBP25.66■■□□□ 1.7
CACNB3-221ENST00000552022 LAMC3Q9Y6N6 1575 aa25.65■■□□□ 1.7
CACNB3-221ENST00000552022 KIF21AQ7Z4S6 1674 aa25.63■■□□□ 1.69
CACNB3-221ENST00000552022 PEG3Q9GZU2 1588 aa25.53■■□□□ 1.68
CACNB3-221ENST00000552022 BAZ1AQ9NRL2 1556 aaPredicted RBP25.52■■□□□ 1.68
CACNB3-221ENST00000552022 PDS5BQ9NTI5 1447 aa25.51■■□□□ 1.67
CACNB3-221ENST00000552022 MROH2BQ7Z745 1585 aa25.34■■□□□ 1.65
CACNB3-221ENST00000552022 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
CACNB3-221ENST00000552022 CADPSQ9ULU8 1353 aa25.31■■□□□ 1.64
CACNB3-221ENST00000552022 WDR62O43379 1518 aa25.31■■□□□ 1.64
CACNB3-221ENST00000552022 OSCARQ8IYS5 282 aa25.18■■□□□ 1.62
CACNB3-221ENST00000552022 CEP164Q9UPV0 1460 aa25.09■■□□□ 1.61
CACNB3-221ENST00000552022 FANCD2Q9BXW9 1451 aa25.02■■□□□ 1.6
CACNB3-221ENST00000552022 WIZO95785 1651 aa25.01■■□□□ 1.59
CACNB3-221ENST00000552022 RIMBP3CA6NJZ7 1639 aa24.94■■□□□ 1.58
CACNB3-221ENST00000552022 RIMBP3BA6NNM3 1639 aa24.94■■□□□ 1.58
CACNB3-221ENST00000552022 RIMBP3Q9UFD9 1639 aa24.94■■□□□ 1.58
CACNB3-221ENST00000552022 CFTRP13569 1480 aa24.89■■□□□ 1.57
CACNB3-221ENST00000552022 URB2Q14146 1524 aaKnown RBP24.88■■□□□ 1.57
CACNB3-221ENST00000552022 ARHGEF11O15085 1522 aa24.77■■□□□ 1.56
CACNB3-221ENST00000552022 ZNF608Q9ULD9 1512 aaPredicted RBP24.7■■□□□ 1.54
CACNB3-221ENST00000552022 CYB5RLQ6IPT4 315 aa24.65■■□□□ 1.54
CACNB3-221ENST00000552022 IFT140Q96RY7 1462 aa24.62■■□□□ 1.53
CACNB3-221ENST00000552022 PRDM2Q13029 1718 aa24.61■■□□□ 1.53
CACNB3-221ENST00000552022 TOP2AP11388 1531 aaKnown RBP24.6■■□□□ 1.53
CACNB3-221ENST00000552022 RSF1Q96T23 1441 aaPredicted RBP24.56■■□□□ 1.52
CACNB3-221ENST00000552022 TRHP20396 242 aaPredicted RBP24.56■■□□□ 1.52
CACNB3-221ENST00000552022 EIF4G3O43432 1585 aaKnown RBP24.5■■□□□ 1.51
CACNB3-221ENST00000552022 ARAP1Q96P48 1450 aa24.49■■□□□ 1.51
CACNB3-221ENST00000552022 CHD1O14646 1710 aa24.48■■□□□ 1.51
CACNB3-221ENST00000552022 TOPBP1Q92547 1522 aa24.48■■□□□ 1.51
CACNB3-221ENST00000552022 AQRO60306 1485 aaKnown RBP eCLIP24.39■■□□□ 1.5
CACNB3-221ENST00000552022 CCDC88BA6NC98 1476 aa24.37■■□□□ 1.49
CACNB3-221ENST00000552022 ABCC8Q09428 1581 aa24.36■■□□□ 1.49
CACNB3-221ENST00000552022 TARBP1Q13395 1621 aaKnown RBP24.35■■□□□ 1.49
CACNB3-221ENST00000552022 FBLN2P98095 1184 aa24.34■■□□□ 1.49
CACNB3-221ENST00000552022 DNMBPQ6XZF7 1577 aa24.33■■□□□ 1.48
CACNB3-221ENST00000552022 AEBP2Q6ZN18 517 aaPredicted RBP24.31■■□□□ 1.48
CACNB3-221ENST00000552022 POLA1P09884 1462 aaPredicted RBP24.19■■□□□ 1.46
CACNB3-221ENST00000552022 CLASP1Q7Z460 1538 aa24.15■■□□□ 1.46
CACNB3-221ENST00000552022 RAD54L2Q9Y4B4 1467 aa24.13■■□□□ 1.45
CACNB3-221ENST00000552022 TDRD9Q8NDG6 1382 aaKnown RBP24.12■■□□□ 1.45
CACNB3-221ENST00000552022 SNAPC4Q5SXM2 1469 aa24.08■■□□□ 1.45
CACNB3-221ENST00000552022 SOGA1O94964 1423 aa24.07■■□□□ 1.44
CACNB3-221ENST00000552022 SYNJ1O43426 1573 aa24.04■■□□□ 1.44
CACNB3-221ENST00000552022 CHMP7Q8WUX9 453 aaPredicted RBP24.04■■□□□ 1.44
CACNB3-221ENST00000552022 WDR97A6NE52 1622 aa23.99■■□□□ 1.43
CACNB3-221ENST00000552022 MAGI1Q96QZ7 1491 aaPredicted RBP23.98■■□□□ 1.43
CACNB3-221ENST00000552022 FGD5Q6ZNL6 1462 aa23.94■■□□□ 1.42
CACNB3-221ENST00000552022 GAPVD1Q14C86 1478 aa23.93■■□□□ 1.42
CACNB3-221ENST00000552022 SYNJ2O15056 1496 aa23.92■■□□□ 1.42
CACNB3-221ENST00000552022 GRIN2BQ13224 1484 aa23.91■■□□□ 1.42
CACNB3-221ENST00000552022 CUX1P39880 1505 aa23.84■■□□□ 1.41
CACNB3-221ENST00000552022 PBRM1Q86U86 1689 aa23.81■■□□□ 1.4
CACNB3-221ENST00000552022 ERCC6L2Q5T890 1561 aa23.77■■□□□ 1.4
CACNB3-221ENST00000552022 KIF13AQ9H1H9 1805 aa23.67■■□□□ 1.38
CACNB3-221ENST00000552022 ABCA5Q8WWZ7 1642 aa23.66■■□□□ 1.38
CACNB3-221ENST00000552022 CEP170Q5SW79 1584 aa23.64■■□□□ 1.37
CACNB3-221ENST00000552022 ABCA10Q8WWZ4 1543 aa23.63■■□□□ 1.37
CACNB3-221ENST00000552022 GRIN2AQ12879 1464 aa23.62■■□□□ 1.37
CACNB3-221ENST00000552022 NUP160Q12769 1436 aa23.57■■□□□ 1.36
CACNB3-221ENST00000552022 SHROOM2Q13796 1616 aa23.56■■□□□ 1.36
CACNB3-221ENST00000552022 ADAMTS12P58397 1594 aa23.52■■□□□ 1.36
CACNB3-221ENST00000552022 FHAD1B1AJZ9 1412 aa23.42■■□□□ 1.34
CACNB3-221ENST00000552022 KDM4FA0A1W2PPD8 638 aa23.41■■□□□ 1.34
CACNB3-221ENST00000552022 FAM69CQ0P6D2 419 aa23.41■■□□□ 1.34
CACNB3-221ENST00000552022 PRG4Q92954 1404 aaPredicted RBP23.4■■□□□ 1.34
CACNB3-221ENST00000552022 ABCC10Q5T3U5 1492 aa23.39■■□□□ 1.34
CACNB3-221ENST00000552022 ILDR1Q86SU0 546 aaPredicted RBP23.38■■□□□ 1.33
CACNB3-221ENST00000552022 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
CACNB3-221ENST00000552022 JPH4Q96JJ6 628 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms