RNA–Protein interactions for RNA: ENST00000551922.5

LINC02396-203, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 5 BASIC

Gene LINC02396, Length 525 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-203ENST00000551922 NISCHQ9Y2I1 1504 aa23.99■■□□□ 1.43
LINC02396-203ENST00000551922 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
LINC02396-203ENST00000551922 ABCC9O60706 1549 aa21.25■□□□□ 0.99
LINC02396-203ENST00000551922 DCAF8L2P0C7V8 631 aa20.24■□□□□ 0.83
LINC02396-203ENST00000551922 RB1CC1Q8TDY2 1594 aa20.21■□□□□ 0.83
LINC02396-203ENST00000551922 NACADO15069 1562 aa20.15■□□□□ 0.82
LINC02396-203ENST00000551922 DNAJC5BQ9UF47 199 aa20.09■□□□□ 0.81
LINC02396-203ENST00000551922 MYO15BQ96JP2 1530 aa19.98■□□□□ 0.79
LINC02396-203ENST00000551922 ZCCHC6Q5VYS8 1495 aaKnown RBP19.9■□□□□ 0.78
LINC02396-203ENST00000551922 UNC13AQ9UPW8 1703 aa19.85■□□□□ 0.77
LINC02396-203ENST00000551922 PABPN1Q86U42 306 aaKnown RBP eCLIP19.82■□□□□ 0.76
LINC02396-203ENST00000551922 DCAF1Q9Y4B6 1507 aa19.81■□□□□ 0.76
LINC02396-203ENST00000551922 BICRAQ9NZM4 1560 aa19.63■□□□□ 0.73
LINC02396-203ENST00000551922 SCRIBQ14160 1630 aa19.44■□□□□ 0.7
LINC02396-203ENST00000551922 SHROOM4Q9ULL8 1493 aa19.37■□□□□ 0.69
LINC02396-203ENST00000551922 CC2D2AQ9P2K1 1620 aa19.25■□□□□ 0.67
LINC02396-203ENST00000551922 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
LINC02396-203ENST00000551922 EIF4G1Q04637 1599 aaKnown RBP19.15■□□□□ 0.66
LINC02396-203ENST00000551922 NCAPD3P42695 1498 aa18.66■□□□□ 0.58
LINC02396-203ENST00000551922 ATAD2BQ9ULI0 1458 aa18.63■□□□□ 0.57
LINC02396-203ENST00000551922 DNAJC5Q9H3Z4 198 aa18.62■□□□□ 0.57
LINC02396-203ENST00000551922 SMARCA4P51532 1647 aa18.59■□□□□ 0.57
LINC02396-203ENST00000551922 BAZ1AQ9NRL2 1556 aaPredicted RBP18.56■□□□□ 0.56
LINC02396-203ENST00000551922 SMARCA2P51531 1590 aa18.53■□□□□ 0.56
LINC02396-203ENST00000551922 MROH2BQ7Z745 1585 aa18.48■□□□□ 0.55
LINC02396-203ENST00000551922 HMGXB3Q12766 1538 aa18.46■□□□□ 0.55
LINC02396-203ENST00000551922 CUX2O14529 1486 aa18.46■□□□□ 0.54
LINC02396-203ENST00000551922 PEG3Q9GZU2 1588 aa18.43■□□□□ 0.54
LINC02396-203ENST00000551922 BAZ1BQ9UIG0 1483 aaKnown RBP18.41■□□□□ 0.54
LINC02396-203ENST00000551922 ERCC6Q03468 1493 aa18.37■□□□□ 0.53
LINC02396-203ENST00000551922 RSF1Q96T23 1441 aaPredicted RBP18.24■□□□□ 0.51
LINC02396-203ENST00000551922 NESP48681 1621 aa18.24■□□□□ 0.51
LINC02396-203ENST00000551922 WIZO95785 1651 aa18.22■□□□□ 0.51
LINC02396-203ENST00000551922 THOC2Q8NI27 1593 aaKnown RBP18.15■□□□□ 0.5
LINC02396-203ENST00000551922 CADPSQ9ULU8 1353 aa18.13■□□□□ 0.49
LINC02396-203ENST00000551922 LAMC3Q9Y6N6 1575 aa18.13■□□□□ 0.49
LINC02396-203ENST00000551922 PDS5BQ9NTI5 1447 aa18.07■□□□□ 0.48
LINC02396-203ENST00000551922 KIF21AQ7Z4S6 1674 aa18.06■□□□□ 0.48
LINC02396-203ENST00000551922 TOP2AP11388 1531 aaKnown RBP18.02■□□□□ 0.47
LINC02396-203ENST00000551922 CFTRP13569 1480 aa17.94■□□□□ 0.46
LINC02396-203ENST00000551922 CCDC88BA6NC98 1476 aa17.88■□□□□ 0.45
LINC02396-203ENST00000551922 FANCD2Q9BXW9 1451 aa17.87■□□□□ 0.45
LINC02396-203ENST00000551922 MRC2Q9UBG0 1479 aa17.85■□□□□ 0.45
LINC02396-203ENST00000551922 CEP164Q9UPV0 1460 aa17.83■□□□□ 0.45
LINC02396-203ENST00000551922 WDR62O43379 1518 aa17.82■□□□□ 0.44
LINC02396-203ENST00000551922 URB2Q14146 1524 aaKnown RBP17.69■□□□□ 0.42
LINC02396-203ENST00000551922 SUPT5HO00267 1087 aaKnown RBP17.68■□□□□ 0.42
LINC02396-203ENST00000551922 TRIM41Q8WV44 630 aa17.67■□□□□ 0.42
LINC02396-203ENST00000551922 PRDM2Q13029 1718 aa17.6■□□□□ 0.41
LINC02396-203ENST00000551922 ABCC8Q09428 1581 aa17.55■□□□□ 0.4
LINC02396-203ENST00000551922 TOPBP1Q92547 1522 aa17.54■□□□□ 0.4
LINC02396-203ENST00000551922 IFT140Q96RY7 1462 aa17.49■□□□□ 0.39
LINC02396-203ENST00000551922 OSCARQ8IYS5 282 aa17.47■□□□□ 0.39
LINC02396-203ENST00000551922 DNMBPQ6XZF7 1577 aa17.47■□□□□ 0.39
LINC02396-203ENST00000551922 ZNF608Q9ULD9 1512 aaPredicted RBP17.44■□□□□ 0.38
LINC02396-203ENST00000551922 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.38
LINC02396-203ENST00000551922 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.38
LINC02396-203ENST00000551922 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.38
LINC02396-203ENST00000551922 POLA1P09884 1462 aaPredicted RBP17.38■□□□□ 0.37
LINC02396-203ENST00000551922 SOGA1O94964 1423 aa17.37■□□□□ 0.37
LINC02396-203ENST00000551922 AQRO60306 1485 aaKnown RBP eCLIP17.35■□□□□ 0.37
LINC02396-203ENST00000551922 TARBP1Q13395 1621 aaKnown RBP17.34■□□□□ 0.37
LINC02396-203ENST00000551922 RAD54L2Q9Y4B4 1467 aa17.34■□□□□ 0.37
LINC02396-203ENST00000551922 CUX1P39880 1505 aa17.33■□□□□ 0.37
LINC02396-203ENST00000551922 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
LINC02396-203ENST00000551922 TDRD9Q8NDG6 1382 aaKnown RBP17.3■□□□□ 0.36
LINC02396-203ENST00000551922 EIF4G3O43432 1585 aaKnown RBP17.3■□□□□ 0.36
LINC02396-203ENST00000551922 ARHGEF11O15085 1522 aa17.29■□□□□ 0.36
LINC02396-203ENST00000551922 CHD1O14646 1710 aa17.25■□□□□ 0.35
LINC02396-203ENST00000551922 FBLN2P98095 1184 aa17.22■□□□□ 0.35
LINC02396-203ENST00000551922 WRNQ14191 1432 aaPredicted RBP eCLIP17.17■□□□□ 0.34
LINC02396-203ENST00000551922 WDR97A6NE52 1622 aa17.16■□□□□ 0.34
LINC02396-203ENST00000551922 CHMP7Q8WUX9 453 aaPredicted RBP17.15■□□□□ 0.34
LINC02396-203ENST00000551922 GRIN2BQ13224 1484 aa17.14■□□□□ 0.33
LINC02396-203ENST00000551922 ABCA10Q8WWZ4 1543 aa17.14■□□□□ 0.33
LINC02396-203ENST00000551922 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
LINC02396-203ENST00000551922 SNAPC4Q5SXM2 1469 aa17.12■□□□□ 0.33
LINC02396-203ENST00000551922 TOP2BQ02880 1626 aa17.1■□□□□ 0.33
LINC02396-203ENST00000551922 ARAP1Q96P48 1450 aa17.1■□□□□ 0.33
LINC02396-203ENST00000551922 MAGI1Q96QZ7 1491 aaPredicted RBP17.1■□□□□ 0.33
LINC02396-203ENST00000551922 SYNJ1O43426 1573 aa17.08■□□□□ 0.32
LINC02396-203ENST00000551922 CYB5RLQ6IPT4 315 aa17.08■□□□□ 0.32
LINC02396-203ENST00000551922 BIVM-ERCC5R4GMW8 1640 aa17.07■□□□□ 0.32
LINC02396-203ENST00000551922 SYNJ2O15056 1496 aa17.05■□□□□ 0.32
LINC02396-203ENST00000551922 ABCA5Q8WWZ7 1642 aa17.02■□□□□ 0.31
LINC02396-203ENST00000551922 CLASP1Q7Z460 1538 aa17.01■□□□□ 0.31
LINC02396-203ENST00000551922 PBRM1Q86U86 1689 aa16.97■□□□□ 0.31
LINC02396-203ENST00000551922 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
LINC02396-203ENST00000551922 FHAD1B1AJZ9 1412 aa16.93■□□□□ 0.3
LINC02396-203ENST00000551922 ERICH3Q5RHP9 1530 aa16.91■□□□□ 0.3
LINC02396-203ENST00000551922 GRIN2AQ12879 1464 aa16.9■□□□□ 0.3
LINC02396-203ENST00000551922 IGF1RP08069 1367 aa16.87■□□□□ 0.29
LINC02396-203ENST00000551922 ADAMTS12P58397 1594 aa16.86■□□□□ 0.29
LINC02396-203ENST00000551922 NUP160Q12769 1436 aa16.86■□□□□ 0.29
LINC02396-203ENST00000551922 KIF27Q86VH2 1401 aa16.84■□□□□ 0.29
LINC02396-203ENST00000551922 CEP170Q5SW79 1584 aa16.8■□□□□ 0.28
LINC02396-203ENST00000551922 JPH4Q96JJ6 628 aa16.79■□□□□ 0.28
LINC02396-203ENST00000551922 CARMIL1Q5VZK9 1371 aa16.74■□□□□ 0.27
LINC02396-203ENST00000551922 ERCC6L2Q5T890 1561 aa16.71■□□□□ 0.27
LINC02396-203ENST00000551922 PRG4Q92954 1404 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms