RNA–Protein interactions for RNA: ENST00000551681.1

RRN3P1-203, Transcript of RRN3 homolog, RNA polymerase I transcription factor pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene RRN3P1, Length 1,151 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3P1-203ENST00000551681 NISCHQ9Y2I1 1504 aa23.23■■□□□ 1.31
RRN3P1-203ENST00000551681 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
RRN3P1-203ENST00000551681 ABCC9O60706 1549 aa19.98■□□□□ 0.79
RRN3P1-203ENST00000551681 NACADO15069 1562 aa19.42■□□□□ 0.7
RRN3P1-203ENST00000551681 RB1CC1Q8TDY2 1594 aa19.41■□□□□ 0.7
RRN3P1-203ENST00000551681 ZCCHC6Q5VYS8 1495 aaKnown RBP19.39■□□□□ 0.69
RRN3P1-203ENST00000551681 MYO15BQ96JP2 1530 aa19.36■□□□□ 0.69
RRN3P1-203ENST00000551681 DCAF1Q9Y4B6 1507 aa19.31■□□□□ 0.68
RRN3P1-203ENST00000551681 DCAF8L2P0C7V8 631 aa19.3■□□□□ 0.68
RRN3P1-203ENST00000551681 DNAJC5BQ9UF47 199 aa18.88■□□□□ 0.61
RRN3P1-203ENST00000551681 UNC13AQ9UPW8 1703 aa18.87■□□□□ 0.61
RRN3P1-203ENST00000551681 SCRIBQ14160 1630 aa18.78■□□□□ 0.6
RRN3P1-203ENST00000551681 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
RRN3P1-203ENST00000551681 BICRAQ9NZM4 1560 aa18.68■□□□□ 0.58
RRN3P1-203ENST00000551681 PABPN1Q86U42 306 aaKnown RBP eCLIP18.63■□□□□ 0.57
RRN3P1-203ENST00000551681 EIF4G1Q04637 1599 aaKnown RBP18.25■□□□□ 0.51
RRN3P1-203ENST00000551681 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
RRN3P1-203ENST00000551681 BAZ1AQ9NRL2 1556 aaPredicted RBP18.07■□□□□ 0.48
RRN3P1-203ENST00000551681 SMARCA4P51532 1647 aa18.01■□□□□ 0.47
RRN3P1-203ENST00000551681 CECR2Q9BXF3 1484 aa18.01■□□□□ 0.47
RRN3P1-203ENST00000551681 SMARCA2P51531 1590 aa17.94■□□□□ 0.46
RRN3P1-203ENST00000551681 PEG3Q9GZU2 1588 aa17.87■□□□□ 0.45
RRN3P1-203ENST00000551681 NCAPD3P42695 1498 aa17.86■□□□□ 0.45
RRN3P1-203ENST00000551681 ATAD2BQ9ULI0 1458 aa17.86■□□□□ 0.45
RRN3P1-203ENST00000551681 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
RRN3P1-203ENST00000551681 HMGXB3Q12766 1538 aa17.83■□□□□ 0.45
RRN3P1-203ENST00000551681 BAZ1BQ9UIG0 1483 aaKnown RBP17.77■□□□□ 0.44
RRN3P1-203ENST00000551681 RSF1Q96T23 1441 aaPredicted RBP17.7■□□□□ 0.42
RRN3P1-203ENST00000551681 WIZO95785 1651 aa17.67■□□□□ 0.42
RRN3P1-203ENST00000551681 AEBP2Q6ZN18 517 aaPredicted RBP17.59■□□□□ 0.41
RRN3P1-203ENST00000551681 TOP2AP11388 1531 aaKnown RBP17.57■□□□□ 0.4
RRN3P1-203ENST00000551681 DNAJC5Q9H3Z4 198 aa17.45■□□□□ 0.38
RRN3P1-203ENST00000551681 LAMC3Q9Y6N6 1575 aa17.43■□□□□ 0.38
RRN3P1-203ENST00000551681 CADPSQ9ULU8 1353 aa17.34■□□□□ 0.37
RRN3P1-203ENST00000551681 SUPT5HO00267 1087 aaKnown RBP17.32■□□□□ 0.36
RRN3P1-203ENST00000551681 ERCC6Q03468 1493 aa17.31■□□□□ 0.36
RRN3P1-203ENST00000551681 PDS5BQ9NTI5 1447 aa17.3■□□□□ 0.36
RRN3P1-203ENST00000551681 CCDC88BA6NC98 1476 aa17.29■□□□□ 0.36
RRN3P1-203ENST00000551681 CUX2O14529 1486 aa17.29■□□□□ 0.36
RRN3P1-203ENST00000551681 NESP48681 1621 aa17.28■□□□□ 0.36
RRN3P1-203ENST00000551681 CFTRP13569 1480 aa17.26■□□□□ 0.35
RRN3P1-203ENST00000551681 PRDM2Q13029 1718 aa17.24■□□□□ 0.35
RRN3P1-203ENST00000551681 KIF21AQ7Z4S6 1674 aa17.16■□□□□ 0.34
RRN3P1-203ENST00000551681 CEP164Q9UPV0 1460 aa17.15■□□□□ 0.34
RRN3P1-203ENST00000551681 FANCD2Q9BXW9 1451 aa17.14■□□□□ 0.33
RRN3P1-203ENST00000551681 THOC2Q8NI27 1593 aaKnown RBP17.08■□□□□ 0.32
RRN3P1-203ENST00000551681 MRC2Q9UBG0 1479 aa17.08■□□□□ 0.32
RRN3P1-203ENST00000551681 WDR62O43379 1518 aa17.01■□□□□ 0.31
RRN3P1-203ENST00000551681 ABCC8Q09428 1581 aa17■□□□□ 0.31
RRN3P1-203ENST00000551681 URB2Q14146 1524 aaKnown RBP16.91■□□□□ 0.3
RRN3P1-203ENST00000551681 DNMBPQ6XZF7 1577 aa16.9■□□□□ 0.3
RRN3P1-203ENST00000551681 TOPBP1Q92547 1522 aa16.87■□□□□ 0.29
RRN3P1-203ENST00000551681 IFT140Q96RY7 1462 aa16.79■□□□□ 0.28
RRN3P1-203ENST00000551681 WRNQ14191 1432 aaPredicted RBP eCLIP16.75■□□□□ 0.27
RRN3P1-203ENST00000551681 CUX1P39880 1505 aa16.75■□□□□ 0.27
RRN3P1-203ENST00000551681 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
RRN3P1-203ENST00000551681 TOP2BQ02880 1626 aa16.71■□□□□ 0.27
RRN3P1-203ENST00000551681 BIVM-ERCC5R4GMW8 1640 aa16.71■□□□□ 0.27
RRN3P1-203ENST00000551681 FGD5Q6ZNL6 1462 aa16.71■□□□□ 0.27
RRN3P1-203ENST00000551681 WDR97A6NE52 1622 aa16.7■□□□□ 0.26
RRN3P1-203ENST00000551681 SOGA1O94964 1423 aa16.67■□□□□ 0.26
RRN3P1-203ENST00000551681 TARBP1Q13395 1621 aaKnown RBP16.67■□□□□ 0.26
RRN3P1-203ENST00000551681 SYNJ1O43426 1573 aa16.64■□□□□ 0.25
RRN3P1-203ENST00000551681 TRIM41Q8WV44 630 aa16.62■□□□□ 0.25
RRN3P1-203ENST00000551681 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
RRN3P1-203ENST00000551681 RAD54L2Q9Y4B4 1467 aa16.59■□□□□ 0.25
RRN3P1-203ENST00000551681 ABCA10Q8WWZ4 1543 aa16.59■□□□□ 0.25
RRN3P1-203ENST00000551681 ZNF608Q9ULD9 1512 aaPredicted RBP16.57■□□□□ 0.24
RRN3P1-203ENST00000551681 AQRO60306 1485 aaKnown RBP eCLIP16.51■□□□□ 0.23
RRN3P1-203ENST00000551681 GRIN2BQ13224 1484 aa16.5■□□□□ 0.23
RRN3P1-203ENST00000551681 GAPVD1Q14C86 1478 aa16.5■□□□□ 0.23
RRN3P1-203ENST00000551681 ABCA5Q8WWZ7 1642 aa16.5■□□□□ 0.23
RRN3P1-203ENST00000551681 TDRD9Q8NDG6 1382 aaKnown RBP16.5■□□□□ 0.23
RRN3P1-203ENST00000551681 PBRM1Q86U86 1689 aa16.48■□□□□ 0.23
RRN3P1-203ENST00000551681 MAGI1Q96QZ7 1491 aaPredicted RBP16.48■□□□□ 0.23
RRN3P1-203ENST00000551681 OSCARQ8IYS5 282 aa16.46■□□□□ 0.23
RRN3P1-203ENST00000551681 KIF27Q86VH2 1401 aa16.44■□□□□ 0.22
RRN3P1-203ENST00000551681 ERICH3Q5RHP9 1530 aa16.43■□□□□ 0.22
RRN3P1-203ENST00000551681 CHIC1Q5VXU3 224 aa16.42■□□□□ 0.22
RRN3P1-203ENST00000551681 SNAPC4Q5SXM2 1469 aa16.42■□□□□ 0.22
RRN3P1-203ENST00000551681 SYNJ2O15056 1496 aa16.38■□□□□ 0.21
RRN3P1-203ENST00000551681 CHD1O14646 1710 aa16.36■□□□□ 0.21
RRN3P1-203ENST00000551681 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
RRN3P1-203ENST00000551681 ADAMTS12P58397 1594 aa16.34■□□□□ 0.21
RRN3P1-203ENST00000551681 FHAD1B1AJZ9 1412 aa16.34■□□□□ 0.21
RRN3P1-203ENST00000551681 CUL7Q14999 1698 aa16.34■□□□□ 0.21
RRN3P1-203ENST00000551681 FBLN2P98095 1184 aa16.33■□□□□ 0.2
RRN3P1-203ENST00000551681 RIMBP3CA6NJZ7 1639 aa16.32■□□□□ 0.2
RRN3P1-203ENST00000551681 RIMBP3BA6NNM3 1639 aa16.32■□□□□ 0.2
RRN3P1-203ENST00000551681 RIMBP3Q9UFD9 1639 aa16.32■□□□□ 0.2
RRN3P1-203ENST00000551681 GRIN2AQ12879 1464 aa16.28■□□□□ 0.2
RRN3P1-203ENST00000551681 EEA1Q15075 1411 aa16.27■□□□□ 0.19
RRN3P1-203ENST00000551681 IGF1RP08069 1367 aa16.25■□□□□ 0.19
RRN3P1-203ENST00000551681 ARHGEF11O15085 1522 aa16.21■□□□□ 0.19
RRN3P1-203ENST00000551681 CARMIL1Q5VZK9 1371 aa16.2■□□□□ 0.18
RRN3P1-203ENST00000551681 CLASP1Q7Z460 1538 aa16.19■□□□□ 0.18
RRN3P1-203ENST00000551681 NUP160Q12769 1436 aa16.18■□□□□ 0.18
RRN3P1-203ENST00000551681 RAPGEF2Q9Y4G8 1499 aa16.15■□□□□ 0.18
RRN3P1-203ENST00000551681 CEP170Q5SW79 1584 aa16.14■□□□□ 0.17
RRN3P1-203ENST00000551681 RUSC2Q8N2Y8 1516 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms