RNA–Protein interactions for RNA: ENST00000551564.1

ITGA5-207, Transcript of integrin subunit alpha 5, humanhuman

TSL 3

Gene ITGA5, Length 354 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-207ENST00000551564 NISCHQ9Y2I1 1504 aa48.88■■■■■ 5.41
ITGA5-207ENST00000551564 CCDC180Q9P1Z9 1646 aa43.35■■■■■ 4.53
ITGA5-207ENST00000551564 ABCC9O60706 1549 aa42.42■■■■■ 4.38
ITGA5-207ENST00000551564 DCAF8L2P0C7V8 631 aa40.94■■■■■ 4.14
ITGA5-207ENST00000551564 RB1CC1Q8TDY2 1594 aa40.79■■■■■ 4.12
ITGA5-207ENST00000551564 NACADO15069 1562 aa40.76■■■■■ 4.12
ITGA5-207ENST00000551564 ZCCHC6Q5VYS8 1495 aaKnown RBP40.72■■■■■ 4.11
ITGA5-207ENST00000551564 MYO15BQ96JP2 1530 aa40.51■■■■■ 4.08
ITGA5-207ENST00000551564 DCAF1Q9Y4B6 1507 aa40.39■■■■■ 4.06
ITGA5-207ENST00000551564 UNC13AQ9UPW8 1703 aa39.85■■■■□ 3.97
ITGA5-207ENST00000551564 PABPN1Q86U42 306 aaKnown RBP eCLIP39.7■■■■□ 3.95
ITGA5-207ENST00000551564 SCRIBQ14160 1630 aa39.65■■■■□ 3.94
ITGA5-207ENST00000551564 BICRAQ9NZM4 1560 aa39.55■■■■□ 3.92
ITGA5-207ENST00000551564 SHROOM4Q9ULL8 1493 aa39.09■■■■□ 3.85
ITGA5-207ENST00000551564 DNAJC5BQ9UF47 199 aa38.84■■■■□ 3.81
ITGA5-207ENST00000551564 EIF4G1Q04637 1599 aaKnown RBP38.51■■■■□ 3.76
ITGA5-207ENST00000551564 CC2D2AQ9P2K1 1620 aa38.33■■■■□ 3.73
ITGA5-207ENST00000551564 CECR2Q9BXF3 1484 aa38.1■■■■□ 3.69
ITGA5-207ENST00000551564 SMARCA4P51532 1647 aa37.9■■■■□ 3.66
ITGA5-207ENST00000551564 BAZ1AQ9NRL2 1556 aaPredicted RBP37.87■■■■□ 3.65
ITGA5-207ENST00000551564 MROH2BQ7Z745 1585 aa37.7■■■■□ 3.63
ITGA5-207ENST00000551564 ATAD2BQ9ULI0 1458 aa37.67■■■■□ 3.62
ITGA5-207ENST00000551564 NCAPD3P42695 1498 aa37.62■■■■□ 3.61
ITGA5-207ENST00000551564 SMARCA2P51531 1590 aa37.62■■■■□ 3.61
ITGA5-207ENST00000551564 PEG3Q9GZU2 1588 aa37.48■■■■□ 3.59
ITGA5-207ENST00000551564 HMGXB3Q12766 1538 aa37.42■■■■□ 3.58
ITGA5-207ENST00000551564 BAZ1BQ9UIG0 1483 aaKnown RBP37.39■■■■□ 3.58
ITGA5-207ENST00000551564 RSF1Q96T23 1441 aaPredicted RBP37.31■■■■□ 3.56
ITGA5-207ENST00000551564 WIZO95785 1651 aa37.3■■■■□ 3.56
ITGA5-207ENST00000551564 TOP2AP11388 1531 aaKnown RBP36.88■■■■□ 3.49
ITGA5-207ENST00000551564 NESP48681 1621 aa36.74■■■■□ 3.47
ITGA5-207ENST00000551564 LAMC3Q9Y6N6 1575 aa36.6■■■■□ 3.45
ITGA5-207ENST00000551564 ERCC6Q03468 1493 aa36.56■■■■□ 3.44
ITGA5-207ENST00000551564 CADPSQ9ULU8 1353 aa36.55■■■■□ 3.44
ITGA5-207ENST00000551564 SUPT5HO00267 1087 aaKnown RBP36.55■■■■□ 3.44
ITGA5-207ENST00000551564 CCDC88BA6NC98 1476 aa36.48■■■■□ 3.43
ITGA5-207ENST00000551564 PDS5BQ9NTI5 1447 aa36.38■■■■□ 3.41
ITGA5-207ENST00000551564 CFTRP13569 1480 aa36.34■■■■□ 3.41
ITGA5-207ENST00000551564 KIF21AQ7Z4S6 1674 aa36.26■■■■□ 3.4
ITGA5-207ENST00000551564 FANCD2Q9BXW9 1451 aa36.14■■■■□ 3.38
ITGA5-207ENST00000551564 THOC2Q8NI27 1593 aaKnown RBP36.09■■■■□ 3.37
ITGA5-207ENST00000551564 CEP164Q9UPV0 1460 aa36.08■■■■□ 3.37
ITGA5-207ENST00000551564 CUX2O14529 1486 aa36.06■■■■□ 3.36
ITGA5-207ENST00000551564 PRDM2Q13029 1718 aa36.03■■■■□ 3.36
ITGA5-207ENST00000551564 MRC2Q9UBG0 1479 aa36■■■■□ 3.35
ITGA5-207ENST00000551564 WDR62O43379 1518 aa35.85■■■■□ 3.33
ITGA5-207ENST00000551564 URB2Q14146 1524 aaKnown RBP35.77■■■■□ 3.32
ITGA5-207ENST00000551564 TOPBP1Q92547 1522 aa35.57■■■■□ 3.29
ITGA5-207ENST00000551564 ABCC8Q09428 1581 aa35.55■■■■□ 3.28
ITGA5-207ENST00000551564 DNMBPQ6XZF7 1577 aa35.52■■■■□ 3.28
ITGA5-207ENST00000551564 CUX1P39880 1505 aa35.36■■■■□ 3.25
ITGA5-207ENST00000551564 IFT140Q96RY7 1462 aa35.31■■■■□ 3.24
ITGA5-207ENST00000551564 POLA1P09884 1462 aaPredicted RBP35.28■■■■□ 3.24
ITGA5-207ENST00000551564 FGD5Q6ZNL6 1462 aa35.22■■■■□ 3.23
ITGA5-207ENST00000551564 WRNQ14191 1432 aaPredicted RBP eCLIP35.18■■■■□ 3.22
ITGA5-207ENST00000551564 ZNF608Q9ULD9 1512 aaPredicted RBP35.17■■■■□ 3.22
ITGA5-207ENST00000551564 SOGA1O94964 1423 aa35.16■■■■□ 3.22
ITGA5-207ENST00000551564 RAD54L2Q9Y4B4 1467 aa35.16■■■■□ 3.22
ITGA5-207ENST00000551564 TARBP1Q13395 1621 aaKnown RBP35.15■■■■□ 3.22
ITGA5-207ENST00000551564 SYNJ1O43426 1573 aa35.08■■■■□ 3.21
ITGA5-207ENST00000551564 TOP2BQ02880 1626 aa35.05■■■■□ 3.2
ITGA5-207ENST00000551564 BIVM-ERCC5R4GMW8 1640 aa35.03■■■■□ 3.2
ITGA5-207ENST00000551564 EIF4G3O43432 1585 aaKnown RBP35■■■■□ 3.19
ITGA5-207ENST00000551564 AQRO60306 1485 aaKnown RBP eCLIP35■■■■□ 3.194e-7■■■□□ 15.2
ITGA5-207ENST00000551564 TDRD9Q8NDG6 1382 aaKnown RBP34.98■■■■□ 3.19
ITGA5-207ENST00000551564 DNAJC5Q9H3Z4 198 aa34.87■■■■□ 3.17
ITGA5-207ENST00000551564 WDR97A6NE52 1622 aa34.87■■■■□ 3.17
ITGA5-207ENST00000551564 ABCA10Q8WWZ4 1543 aa34.86■■■■□ 3.17
ITGA5-207ENST00000551564 GAPVD1Q14C86 1478 aa34.74■■■■□ 3.15
ITGA5-207ENST00000551564 GRIN2BQ13224 1484 aa34.71■■■■□ 3.15
ITGA5-207ENST00000551564 ABCA5Q8WWZ7 1642 aa34.7■■■■□ 3.14
ITGA5-207ENST00000551564 SNAPC4Q5SXM2 1469 aa34.66■■■■□ 3.14
ITGA5-207ENST00000551564 OSCARQ8IYS5 282 aa34.66■■■■□ 3.14
ITGA5-207ENST00000551564 PBRM1Q86U86 1689 aa34.63■■■■□ 3.13
ITGA5-207ENST00000551564 FBLN2P98095 1184 aa34.62■■■■□ 3.13
ITGA5-207ENST00000551564 MAGI1Q96QZ7 1491 aaPredicted RBP34.59■■■■□ 3.13
ITGA5-207ENST00000551564 CHD1O14646 1710 aa34.55■■■■□ 3.12
ITGA5-207ENST00000551564 CHMP7Q8WUX9 453 aaPredicted RBP34.51■■■■□ 3.12
ITGA5-207ENST00000551564 TRIM41Q8WV44 630 aa34.49■■■■□ 3.11
ITGA5-207ENST00000551564 SYNJ2O15056 1496 aa34.47■■■■□ 3.11
ITGA5-207ENST00000551564 KIF27Q86VH2 1401 aa34.44■■■■□ 3.1
ITGA5-207ENST00000551564 ERICH3Q5RHP9 1530 aa34.44■■■■□ 3.1
ITGA5-207ENST00000551564 ADAMTS12P58397 1594 aa34.37■■■■□ 3.09
ITGA5-207ENST00000551564 FHAD1B1AJZ9 1412 aa34.34■■■■□ 3.09
ITGA5-207ENST00000551564 IGF1RP08069 1367 aa34.29■■■■□ 3.08
ITGA5-207ENST00000551564 GRIN2AQ12879 1464 aa34.27■■■■□ 3.08
ITGA5-207ENST00000551564 RUSC2Q8N2Y8 1516 aa34.19■■■■□ 3.06
ITGA5-207ENST00000551564 CLASP1Q7Z460 1538 aa34.16■■■■□ 3.06
ITGA5-207ENST00000551564 CUL7Q14999 1698 aa34.14■■■■□ 3.06
ITGA5-207ENST00000551564 CHIC1Q5VXU3 224 aa34.13■■■■□ 3.05
ITGA5-207ENST00000551564 CARMIL1Q5VZK9 1371 aa34.1■■■■□ 3.05
ITGA5-207ENST00000551564 NUP160Q12769 1436 aa34.09■■■■□ 3.05
ITGA5-207ENST00000551564 CEP170Q5SW79 1584 aa34.09■■■■□ 3.05
ITGA5-207ENST00000551564 ARHGEF11O15085 1522 aa34.05■■■■□ 3.04
ITGA5-207ENST00000551564 RIMBP3CA6NJZ7 1639 aa34.04■■■■□ 3.04
ITGA5-207ENST00000551564 RIMBP3BA6NNM3 1639 aa34.04■■■■□ 3.04
ITGA5-207ENST00000551564 RIMBP3Q9UFD9 1639 aa34.04■■■■□ 3.04
ITGA5-207ENST00000551564 RAPGEF2Q9Y4G8 1499 aa33.89■■■■□ 3.02
ITGA5-207ENST00000551564 CSRNP3Q8WYN3 585 aa33.83■■■■□ 3.01
ITGA5-207ENST00000551564 EEA1Q15075 1411 aa33.82■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 380.6 ms