RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 NISCHQ9Y2I1 1504 aa25.69■■□□□ 1.7
RAB5C-208ENST00000551338 CCDC180Q9P1Z9 1646 aa22.39■■□□□ 1.18
RAB5C-208ENST00000551338 ZCCHC6Q5VYS8 1495 aaKnown RBP21.68■■□□□ 1.06
RAB5C-208ENST00000551338 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
RAB5C-208ENST00000551338 SHROOM4Q9ULL8 1493 aa21.11■□□□□ 0.97
RAB5C-208ENST00000551338 DCAF8L2P0C7V8 631 aa20.92■□□□□ 0.94
RAB5C-208ENST00000551338 MYO15BQ96JP2 1530 aa20.87■□□□□ 0.93
RAB5C-208ENST00000551338 ABCC9O60706 1549 aa20.79■□□□□ 0.92
RAB5C-208ENST00000551338 NACADO15069 1562 aa20.68■□□□□ 0.9
RAB5C-208ENST00000551338 SCRIBQ14160 1630 aa20.59■□□□□ 0.89
RAB5C-208ENST00000551338 RB1CC1Q8TDY2 1594 aa20.44■□□□□ 0.86
RAB5C-208ENST00000551338 SUPT5HO00267 1087 aaKnown RBP20.36■□□□□ 0.85
RAB5C-208ENST00000551338 UNC13AQ9UPW8 1703 aa20.27■□□□□ 0.83
RAB5C-208ENST00000551338 RSF1Q96T23 1441 aaPredicted RBP20.01■□□□□ 0.79
RAB5C-208ENST00000551338 CECR2Q9BXF3 1484 aa19.95■□□□□ 0.78
RAB5C-208ENST00000551338 BICRAQ9NZM4 1560 aa19.9■□□□□ 0.78
RAB5C-208ENST00000551338 MROH2BQ7Z745 1585 aa19.89■□□□□ 0.77
RAB5C-208ENST00000551338 BAZ1AQ9NRL2 1556 aaPredicted RBP19.82■□□□□ 0.76
RAB5C-208ENST00000551338 WIZO95785 1651 aa19.81■□□□□ 0.76
RAB5C-208ENST00000551338 SMARCA4P51532 1647 aa19.76■□□□□ 0.75
RAB5C-208ENST00000551338 CHIC1Q5VXU3 224 aa19.68■□□□□ 0.74
RAB5C-208ENST00000551338 PABPN1Q86U42 306 aaKnown RBP eCLIP19.57■□□□□ 0.72
RAB5C-208ENST00000551338 TOP2AP11388 1531 aaKnown RBP19.56■□□□□ 0.72
RAB5C-208ENST00000551338 PEG3Q9GZU2 1588 aa19.48■□□□□ 0.71
RAB5C-208ENST00000551338 EIF4G1Q04637 1599 aaKnown RBP19.46■□□□□ 0.71
RAB5C-208ENST00000551338 SMARCA2P51531 1590 aa19.41■□□□□ 0.7
RAB5C-208ENST00000551338 CCDC88BA6NC98 1476 aa19.3■□□□□ 0.68
RAB5C-208ENST00000551338 ATAD2BQ9ULI0 1458 aa19.27■□□□□ 0.67
RAB5C-208ENST00000551338 BAZ1BQ9UIG0 1483 aaKnown RBP19.18■□□□□ 0.66
RAB5C-208ENST00000551338 HMGXB3Q12766 1538 aa19.11■□□□□ 0.65
RAB5C-208ENST00000551338 TRIM41Q8WV44 630 aa19.09■□□□□ 0.65
RAB5C-208ENST00000551338 ABCC8Q09428 1581 aa19.06■□□□□ 0.64
RAB5C-208ENST00000551338 NCAPD3P42695 1498 aa19.03■□□□□ 0.64
RAB5C-208ENST00000551338 LOC105371045A0A1W2PR82 267 aa18.91■□□□□ 0.62
RAB5C-208ENST00000551338 CC2D2AQ9P2K1 1620 aa18.89■□□□□ 0.61
RAB5C-208ENST00000551338 PRDM2Q13029 1718 aa18.88■□□□□ 0.61
RAB5C-208ENST00000551338 SYNJ1O43426 1573 aa18.84■□□□□ 0.61
RAB5C-208ENST00000551338 WRNQ14191 1432 aaPredicted RBP eCLIP18.81■□□□□ 0.6
RAB5C-208ENST00000551338 FAM9AQ8IZU1 332 aaPredicted RBP18.8■□□□□ 0.6
RAB5C-208ENST00000551338 BIVM-ERCC5R4GMW8 1640 aa18.75■□□□□ 0.59
RAB5C-208ENST00000551338 TOP2BQ02880 1626 aa18.71■□□□□ 0.59
RAB5C-208ENST00000551338 CFTRP13569 1480 aa18.7■□□□□ 0.58
RAB5C-208ENST00000551338 SOGA1O94964 1423 aa18.67■□□□□ 0.58
RAB5C-208ENST00000551338 EEA1Q15075 1411 aa18.67■□□□□ 0.58
RAB5C-208ENST00000551338 RUSC2Q8N2Y8 1516 aa18.64■□□□□ 0.57
RAB5C-208ENST00000551338 CUX1P39880 1505 aa18.59■□□□□ 0.57
RAB5C-208ENST00000551338 KIF21BO75037 1637 aa18.54■□□□□ 0.56
RAB5C-208ENST00000551338 CADPSQ9ULU8 1353 aa18.53■□□□□ 0.56
RAB5C-208ENST00000551338 EHMT2Q96KQ7 1210 aa18.52■□□□□ 0.56
RAB5C-208ENST00000551338 GOLGA3Q08378 1498 aa18.47■□□□□ 0.55
RAB5C-208ENST00000551338 CSRNP3Q8WYN3 585 aa18.47■□□□□ 0.55
RAB5C-208ENST00000551338 CEP164Q9UPV0 1460 aa18.42■□□□□ 0.54
RAB5C-208ENST00000551338 TNIKQ9UKE5 1360 aa18.42■□□□□ 0.54
RAB5C-208ENST00000551338 LAMC3Q9Y6N6 1575 aa18.41■□□□□ 0.54
RAB5C-208ENST00000551338 FANCD2Q9BXW9 1451 aa18.38■□□□□ 0.53
RAB5C-208ENST00000551338 NESP48681 1621 aa18.38■□□□□ 0.53
RAB5C-208ENST00000551338 CEP162Q5TB80 1403 aa18.37■□□□□ 0.53
RAB5C-208ENST00000551338 DNMBPQ6XZF7 1577 aa18.34■□□□□ 0.53
RAB5C-208ENST00000551338 PCGF6Q9BYE7 350 aa18.32■□□□□ 0.52
RAB5C-208ENST00000551338 ERICH3Q5RHP9 1530 aa18.32■□□□□ 0.52
RAB5C-208ENST00000551338 FGD5Q6ZNL6 1462 aa18.32■□□□□ 0.52
RAB5C-208ENST00000551338 RAPGEF2Q9Y4G8 1499 aa18.31■□□□□ 0.52
RAB5C-208ENST00000551338 KIF21AQ7Z4S6 1674 aa18.29■□□□□ 0.52
RAB5C-208ENST00000551338 KIF27Q86VH2 1401 aa18.28■□□□□ 0.52
RAB5C-208ENST00000551338 PRXQ9BXM0 1461 aa18.27■□□□□ 0.52
RAB5C-208ENST00000551338 TOPBP1Q92547 1522 aa18.25■□□□□ 0.51
RAB5C-208ENST00000551338 TRIM26Q12899 539 aaPredicted RBP18.25■□□□□ 0.51
RAB5C-208ENST00000551338 WDR97A6NE52 1622 aa18.24■□□□□ 0.51
RAB5C-208ENST00000551338 UBTFP17480 764 aaKnown RBP18.23■□□□□ 0.51
RAB5C-208ENST00000551338 DNAJC5BQ9UF47 199 aa18.22■□□□□ 0.51
RAB5C-208ENST00000551338 CUX2O14529 1486 aa18.21■□□□□ 0.51
RAB5C-208ENST00000551338 URB2Q14146 1524 aaKnown RBP18.19■□□□□ 0.5
RAB5C-208ENST00000551338 POLA1P09884 1462 aaPredicted RBP18.17■□□□□ 0.5
RAB5C-208ENST00000551338 CLIP1P30622 1438 aa18.15■□□□□ 0.5
RAB5C-208ENST00000551338 PDS5BQ9NTI5 1447 aa18.14■□□□□ 0.49
RAB5C-208ENST00000551338 ABCA10Q8WWZ4 1543 aa18.13■□□□□ 0.49
RAB5C-208ENST00000551338 RAD54L2Q9Y4B4 1467 aa18.11■□□□□ 0.49
RAB5C-208ENST00000551338 HRCP23327 699 aa18.07■□□□□ 0.48
RAB5C-208ENST00000551338 ABCA5Q8WWZ7 1642 aa18.07■□□□□ 0.48
RAB5C-208ENST00000551338 IGF1RP08069 1367 aa18.06■□□□□ 0.48
RAB5C-208ENST00000551338 CUL7Q14999 1698 aa18.06■□□□□ 0.48
RAB5C-208ENST00000551338 VPS8Q8N3P4 1428 aa18.06■□□□□ 0.48
RAB5C-208ENST00000551338 ARAP1Q96P48 1450 aa18.02■□□□□ 0.48
RAB5C-208ENST00000551338 TARBP1Q13395 1621 aaKnown RBP18.01■□□□□ 0.47
RAB5C-208ENST00000551338 PPARGC1BQ86YN6 1023 aaKnown RBP18.01■□□□□ 0.47
RAB5C-208ENST00000551338 CTTNBP2Q8WZ74 1663 aa17.99■□□□□ 0.47
RAB5C-208ENST00000551338 CARMIL1Q5VZK9 1371 aa17.99■□□□□ 0.47
RAB5C-208ENST00000551338 MRC2Q9UBG0 1479 aa17.98■□□□□ 0.47
RAB5C-208ENST00000551338 PBRM1Q86U86 1689 aa17.96■□□□□ 0.47
RAB5C-208ENST00000551338 ARHGAP35Q9NRY4 1499 aa17.94■□□□□ 0.46
RAB5C-208ENST00000551338 WDR62O43379 1518 aa17.92■□□□□ 0.46
RAB5C-208ENST00000551338 GAPVD1Q14C86 1478 aa17.88■□□□□ 0.45
RAB5C-208ENST00000551338 THOC2Q8NI27 1593 aaKnown RBP17.87■□□□□ 0.45
RAB5C-208ENST00000551338 RANGAP1P46060 587 aaPredicted RBP17.87■□□□□ 0.45
RAB5C-208ENST00000551338 TDRD9Q8NDG6 1382 aaKnown RBP17.84■□□□□ 0.45
RAB5C-208ENST00000551338 TTBK1Q5TCY1 1321 aaPredicted RBP17.82■□□□□ 0.44
RAB5C-208ENST00000551338 ADAMTS12P58397 1594 aa17.8■□□□□ 0.44
RAB5C-208ENST00000551338 EFCAB5A4FU69 1503 aa17.79■□□□□ 0.44
RAB5C-208ENST00000551338 IFT140Q96RY7 1462 aa17.77■□□□□ 0.44
RAB5C-208ENST00000551338 CFAP43Q8NDM7 1665 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 260.8 ms