RNA–Protein interactions for RNA: ENST00000551223.5

PFDN5-215, Transcript of prefoldin subunit 5, humanhuman

TSL 4

Gene PFDN5, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-215ENST00000551223 NISCHQ9Y2I1 1504 aa22.91■■□□□ 1.26
PFDN5-215ENST00000551223 CCDC180Q9P1Z9 1646 aa20.29■□□□□ 0.84
PFDN5-215ENST00000551223 ABCC9O60706 1549 aa19.84■□□□□ 0.77
PFDN5-215ENST00000551223 DCAF8L2P0C7V8 631 aa19.16■□□□□ 0.66
PFDN5-215ENST00000551223 NACADO15069 1562 aa19.09■□□□□ 0.65
PFDN5-215ENST00000551223 ZCCHC6Q5VYS8 1495 aaKnown RBP19.09■□□□□ 0.65
PFDN5-215ENST00000551223 RB1CC1Q8TDY2 1594 aa19.08■□□□□ 0.65
PFDN5-215ENST00000551223 MYO15BQ96JP2 1530 aa19■□□□□ 0.63
PFDN5-215ENST00000551223 DCAF1Q9Y4B6 1507 aa18.94■□□□□ 0.62
PFDN5-215ENST00000551223 UNC13AQ9UPW8 1703 aa18.65■□□□□ 0.58
PFDN5-215ENST00000551223 PABPN1Q86U42 306 aaKnown RBP eCLIP18.59■□□□□ 0.57
PFDN5-215ENST00000551223 SCRIBQ14160 1630 aa18.55■□□□□ 0.56
PFDN5-215ENST00000551223 BICRAQ9NZM4 1560 aa18.52■□□□□ 0.56
PFDN5-215ENST00000551223 SHROOM4Q9ULL8 1493 aa18.3■□□□□ 0.52
PFDN5-215ENST00000551223 DNAJC5BQ9UF47 199 aa18.2■□□□□ 0.5
PFDN5-215ENST00000551223 EIF4G1Q04637 1599 aaKnown RBP18.02■□□□□ 0.48
PFDN5-215ENST00000551223 CC2D2AQ9P2K1 1620 aa17.93■□□□□ 0.46
PFDN5-215ENST00000551223 CECR2Q9BXF3 1484 aa17.87■□□□□ 0.45
PFDN5-215ENST00000551223 SMARCA4P51532 1647 aa17.74■□□□□ 0.43
PFDN5-215ENST00000551223 BAZ1AQ9NRL2 1556 aaPredicted RBP17.74■□□□□ 0.43
PFDN5-215ENST00000551223 MROH2BQ7Z745 1585 aa17.66■□□□□ 0.42
PFDN5-215ENST00000551223 ATAD2BQ9ULI0 1458 aa17.65■□□□□ 0.42
PFDN5-215ENST00000551223 NCAPD3P42695 1498 aa17.63■□□□□ 0.41
PFDN5-215ENST00000551223 SMARCA2P51531 1590 aa17.61■□□□□ 0.41
PFDN5-215ENST00000551223 PEG3Q9GZU2 1588 aa17.57■□□□□ 0.4
PFDN5-215ENST00000551223 HMGXB3Q12766 1538 aa17.52■□□□□ 0.39
PFDN5-215ENST00000551223 BAZ1BQ9UIG0 1483 aaKnown RBP17.5■□□□□ 0.39
PFDN5-215ENST00000551223 RSF1Q96T23 1441 aaPredicted RBP17.49■□□□□ 0.39
PFDN5-215ENST00000551223 WIZO95785 1651 aa17.46■□□□□ 0.39
PFDN5-215ENST00000551223 TOP2AP11388 1531 aaKnown RBP17.27■□□□□ 0.36
PFDN5-215ENST00000551223 NESP48681 1621 aa17.19■□□□□ 0.34
PFDN5-215ENST00000551223 SUPT5HO00267 1087 aaKnown RBP17.13■□□□□ 0.33
PFDN5-215ENST00000551223 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
PFDN5-215ENST00000551223 LAMC3Q9Y6N6 1575 aa17.12■□□□□ 0.33
PFDN5-215ENST00000551223 CCDC88BA6NC98 1476 aa17.1■□□□□ 0.33
PFDN5-215ENST00000551223 ERCC6Q03468 1493 aa17.08■□□□□ 0.32
PFDN5-215ENST00000551223 CFTRP13569 1480 aa17.03■□□□□ 0.32
PFDN5-215ENST00000551223 PDS5BQ9NTI5 1447 aa17.03■□□□□ 0.32
PFDN5-215ENST00000551223 KIF21AQ7Z4S6 1674 aa16.95■□□□□ 0.3
PFDN5-215ENST00000551223 FANCD2Q9BXW9 1451 aa16.92■□□□□ 0.3
PFDN5-215ENST00000551223 CEP164Q9UPV0 1460 aa16.88■□□□□ 0.29
PFDN5-215ENST00000551223 THOC2Q8NI27 1593 aaKnown RBP16.88■□□□□ 0.29
PFDN5-215ENST00000551223 CUX2O14529 1486 aa16.86■□□□□ 0.29
PFDN5-215ENST00000551223 PRDM2Q13029 1718 aa16.85■□□□□ 0.29
PFDN5-215ENST00000551223 MRC2Q9UBG0 1479 aa16.85■□□□□ 0.29
PFDN5-215ENST00000551223 WDR62O43379 1518 aa16.78■□□□□ 0.28
PFDN5-215ENST00000551223 URB2Q14146 1524 aaKnown RBP16.75■□□□□ 0.27
PFDN5-215ENST00000551223 TOPBP1Q92547 1522 aa16.65■□□□□ 0.26
PFDN5-215ENST00000551223 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
PFDN5-215ENST00000551223 DNMBPQ6XZF7 1577 aa16.63■□□□□ 0.25
PFDN5-215ENST00000551223 CUX1P39880 1505 aa16.55■□□□□ 0.24
PFDN5-215ENST00000551223 IFT140Q96RY7 1462 aa16.54■□□□□ 0.24
PFDN5-215ENST00000551223 POLA1P09884 1462 aaPredicted RBP16.52■□□□□ 0.23
PFDN5-215ENST00000551223 FGD5Q6ZNL6 1462 aa16.49■□□□□ 0.23
PFDN5-215ENST00000551223 WRNQ14191 1432 aaPredicted RBP eCLIP16.48■□□□□ 0.23
PFDN5-215ENST00000551223 SOGA1O94964 1423 aa16.47■□□□□ 0.23
PFDN5-215ENST00000551223 ZNF608Q9ULD9 1512 aaPredicted RBP16.47■□□□□ 0.23
PFDN5-215ENST00000551223 RAD54L2Q9Y4B4 1467 aa16.47■□□□□ 0.23
PFDN5-215ENST00000551223 TARBP1Q13395 1621 aaKnown RBP16.46■□□□□ 0.23
PFDN5-215ENST00000551223 SYNJ1O43426 1573 aa16.43■□□□□ 0.22
PFDN5-215ENST00000551223 TOP2BQ02880 1626 aa16.42■□□□□ 0.22
PFDN5-215ENST00000551223 BIVM-ERCC5R4GMW8 1640 aa16.41■□□□□ 0.22
PFDN5-215ENST00000551223 AQRO60306 1485 aaKnown RBP eCLIP16.39■□□□□ 0.216e-7■■■■■ 36.8
PFDN5-215ENST00000551223 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
PFDN5-215ENST00000551223 EIF4G3O43432 1585 aaKnown RBP16.37■□□□□ 0.21
PFDN5-215ENST00000551223 ABCA10Q8WWZ4 1543 aa16.33■□□□□ 0.2
PFDN5-215ENST00000551223 WDR97A6NE52 1622 aa16.32■□□□□ 0.2
PFDN5-215ENST00000551223 DNAJC5Q9H3Z4 198 aa16.32■□□□□ 0.2
PFDN5-215ENST00000551223 GAPVD1Q14C86 1478 aa16.27■□□□□ 0.19
PFDN5-215ENST00000551223 GRIN2BQ13224 1484 aa16.25■□□□□ 0.19
PFDN5-215ENST00000551223 ABCA5Q8WWZ7 1642 aa16.25■□□□□ 0.19
PFDN5-215ENST00000551223 OSCARQ8IYS5 282 aa16.22■□□□□ 0.19
PFDN5-215ENST00000551223 SNAPC4Q5SXM2 1469 aa16.22■□□□□ 0.19
PFDN5-215ENST00000551223 PBRM1Q86U86 1689 aa16.19■□□□□ 0.18
PFDN5-215ENST00000551223 MAGI1Q96QZ7 1491 aaPredicted RBP16.19■□□□□ 0.18
PFDN5-215ENST00000551223 FBLN2P98095 1184 aa16.19■□□□□ 0.18
PFDN5-215ENST00000551223 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
PFDN5-215ENST00000551223 CHD1O14646 1710 aa16.15■□□□□ 0.18
PFDN5-215ENST00000551223 CHMP7Q8WUX9 453 aaPredicted RBP16.15■□□□□ 0.18
PFDN5-215ENST00000551223 SYNJ2O15056 1496 aa16.14■□□□□ 0.17
PFDN5-215ENST00000551223 KIF27Q86VH2 1401 aa16.13■□□□□ 0.17
PFDN5-215ENST00000551223 ERICH3Q5RHP9 1530 aa16.12■□□□□ 0.17
PFDN5-215ENST00000551223 FHAD1B1AJZ9 1412 aa16.09■□□□□ 0.17
PFDN5-215ENST00000551223 ADAMTS12P58397 1594 aa16.09■□□□□ 0.17
PFDN5-215ENST00000551223 IGF1RP08069 1367 aa16.08■□□□□ 0.16
PFDN5-215ENST00000551223 GRIN2AQ12879 1464 aa16.04■□□□□ 0.16
PFDN5-215ENST00000551223 RUSC2Q8N2Y8 1516 aa16.04■□□□□ 0.16
PFDN5-215ENST00000551223 CHIC1Q5VXU3 224 aa16.03■□□□□ 0.16
PFDN5-215ENST00000551223 CLASP1Q7Z460 1538 aa15.99■□□□□ 0.15
PFDN5-215ENST00000551223 CUL7Q14999 1698 aa15.98■□□□□ 0.15
PFDN5-215ENST00000551223 CARMIL1Q5VZK9 1371 aa15.98■□□□□ 0.15
PFDN5-215ENST00000551223 NUP160Q12769 1436 aa15.97■□□□□ 0.15
PFDN5-215ENST00000551223 CEP170Q5SW79 1584 aa15.96■□□□□ 0.14
PFDN5-215ENST00000551223 ARHGEF11O15085 1522 aa15.93■□□□□ 0.14
PFDN5-215ENST00000551223 RIMBP3CA6NJZ7 1639 aa15.91■□□□□ 0.14
PFDN5-215ENST00000551223 RIMBP3BA6NNM3 1639 aa15.91■□□□□ 0.14
PFDN5-215ENST00000551223 RIMBP3Q9UFD9 1639 aa15.91■□□□□ 0.14
PFDN5-215ENST00000551223 RAPGEF2Q9Y4G8 1499 aa15.87■□□□□ 0.13
PFDN5-215ENST00000551223 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
PFDN5-215ENST00000551223 EEA1Q15075 1411 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms