RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 NISCHQ9Y2I1 1504 aa26.33■■□□□ 1.81
BEST3-210ENST00000551160 ABCC9O60706 1549 aa24.35■■□□□ 1.49
BEST3-210ENST00000551160 CCDC180Q9P1Z9 1646 aa23.73■■□□□ 1.39
BEST3-210ENST00000551160 DNAJC5BQ9UF47 199 aa23.31■■□□□ 1.32
BEST3-210ENST00000551160 RB1CC1Q8TDY2 1594 aa22.87■■□□□ 1.25
BEST3-210ENST00000551160 PABPN1Q86U42 306 aaKnown RBP eCLIP22.63■■□□□ 1.21
BEST3-210ENST00000551160 NACADO15069 1562 aa22.6■■□□□ 1.21
BEST3-210ENST00000551160 DCAF8L2P0C7V8 631 aa22.48■■□□□ 1.19
BEST3-210ENST00000551160 UNC13AQ9UPW8 1703 aa22.26■■□□□ 1.15
BEST3-210ENST00000551160 BICRAQ9NZM4 1560 aa22.26■■□□□ 1.15
BEST3-210ENST00000551160 MYO15BQ96JP2 1530 aa22.13■■□□□ 1.13
BEST3-210ENST00000551160 CECR2Q9BXF3 1484 aa21.96■■□□□ 1.11
BEST3-210ENST00000551160 CC2D2AQ9P2K1 1620 aa21.91■■□□□ 1.1
BEST3-210ENST00000551160 SHROOM4Q9ULL8 1493 aa21.88■■□□□ 1.09
BEST3-210ENST00000551160 EIF4G1Q04637 1599 aaKnown RBP21.75■■□□□ 1.07
BEST3-210ENST00000551160 ZCCHC6Q5VYS8 1495 aaKnown RBP21.74■■□□□ 1.07
BEST3-210ENST00000551160 SCRIBQ14160 1630 aa21.7■■□□□ 1.06
BEST3-210ENST00000551160 DNAJC5Q9H3Z4 198 aa21.69■■□□□ 1.06
BEST3-210ENST00000551160 DCAF1Q9Y4B6 1507 aa21.68■■□□□ 1.06
BEST3-210ENST00000551160 CUX2O14529 1486 aa21.13■□□□□ 0.97
BEST3-210ENST00000551160 ERCC6Q03468 1493 aa21.03■□□□□ 0.96
BEST3-210ENST00000551160 NCAPD3P42695 1498 aa20.92■□□□□ 0.94
BEST3-210ENST00000551160 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
BEST3-210ENST00000551160 NESP48681 1621 aa20.78■□□□□ 0.92
BEST3-210ENST00000551160 HMGXB3Q12766 1538 aa20.69■□□□□ 0.9
BEST3-210ENST00000551160 SMARCA2P51531 1590 aa20.67■□□□□ 0.9
BEST3-210ENST00000551160 SMARCA4P51532 1647 aa20.62■□□□□ 0.89
BEST3-210ENST00000551160 THOC2Q8NI27 1593 aaKnown RBP20.61■□□□□ 0.89
BEST3-210ENST00000551160 TRIM41Q8WV44 630 aa20.58■□□□□ 0.89
BEST3-210ENST00000551160 BAZ1BQ9UIG0 1483 aaKnown RBP20.56■□□□□ 0.88
BEST3-210ENST00000551160 LAMC3Q9Y6N6 1575 aa20.46■□□□□ 0.87
BEST3-210ENST00000551160 BAZ1AQ9NRL2 1556 aaPredicted RBP20.44■□□□□ 0.86
BEST3-210ENST00000551160 PDS5BQ9NTI5 1447 aa20.41■□□□□ 0.86
BEST3-210ENST00000551160 PEG3Q9GZU2 1588 aa20.41■□□□□ 0.86
BEST3-210ENST00000551160 KIF21AQ7Z4S6 1674 aa20.38■□□□□ 0.85
BEST3-210ENST00000551160 MROH2BQ7Z745 1585 aa20.31■□□□□ 0.84
BEST3-210ENST00000551160 MRC2Q9UBG0 1479 aa20.29■□□□□ 0.84
BEST3-210ENST00000551160 CADPSQ9ULU8 1353 aa20.28■□□□□ 0.84
BEST3-210ENST00000551160 WDR62O43379 1518 aa20.24■□□□□ 0.83
BEST3-210ENST00000551160 CEP164Q9UPV0 1460 aa20.1■□□□□ 0.81
BEST3-210ENST00000551160 OSCARQ8IYS5 282 aa20.09■□□□□ 0.81
BEST3-210ENST00000551160 FANCD2Q9BXW9 1451 aa20.05■□□□□ 0.8
BEST3-210ENST00000551160 WIZO95785 1651 aa19.99■□□□□ 0.79
BEST3-210ENST00000551160 CFTRP13569 1480 aa19.94■□□□□ 0.78
BEST3-210ENST00000551160 URB2Q14146 1524 aaKnown RBP19.92■□□□□ 0.78
BEST3-210ENST00000551160 RIMBP3CA6NJZ7 1639 aa19.86■□□□□ 0.77
BEST3-210ENST00000551160 RIMBP3BA6NNM3 1639 aa19.86■□□□□ 0.77
BEST3-210ENST00000551160 RIMBP3Q9UFD9 1639 aa19.86■□□□□ 0.77
BEST3-210ENST00000551160 ARHGEF11O15085 1522 aa19.79■□□□□ 0.76
BEST3-210ENST00000551160 ZNF608Q9ULD9 1512 aaPredicted RBP19.78■□□□□ 0.76
BEST3-210ENST00000551160 TOP2AP11388 1531 aaKnown RBP19.73■□□□□ 0.75
BEST3-210ENST00000551160 RSF1Q96T23 1441 aaPredicted RBP19.73■□□□□ 0.75
BEST3-210ENST00000551160 IFT140Q96RY7 1462 aa19.72■□□□□ 0.75
BEST3-210ENST00000551160 CYB5RLQ6IPT4 315 aa19.69■□□□□ 0.74
BEST3-210ENST00000551160 TOPBP1Q92547 1522 aa19.61■□□□□ 0.73
BEST3-210ENST00000551160 TRHP20396 242 aaPredicted RBP19.61■□□□□ 0.73
BEST3-210ENST00000551160 ARAP1Q96P48 1450 aa19.6■□□□□ 0.73
BEST3-210ENST00000551160 EIF4G3O43432 1585 aaKnown RBP19.57■□□□□ 0.72
BEST3-210ENST00000551160 CCDC88BA6NC98 1476 aa19.54■□□□□ 0.72
BEST3-210ENST00000551160 AQRO60306 1485 aaKnown RBP eCLIP19.53■□□□□ 0.72
BEST3-210ENST00000551160 PRDM2Q13029 1718 aa19.51■□□□□ 0.71
BEST3-210ENST00000551160 FBLN2P98095 1184 aa19.49■□□□□ 0.71
BEST3-210ENST00000551160 CHD1O14646 1710 aa19.46■□□□□ 0.71
BEST3-210ENST00000551160 ABCC8Q09428 1581 aa19.46■□□□□ 0.71
BEST3-210ENST00000551160 DNMBPQ6XZF7 1577 aa19.46■□□□□ 0.71
BEST3-210ENST00000551160 TARBP1Q13395 1621 aaKnown RBP19.43■□□□□ 0.7
BEST3-210ENST00000551160 POLA1P09884 1462 aaPredicted RBP19.39■□□□□ 0.69
BEST3-210ENST00000551160 AEBP2Q6ZN18 517 aaPredicted RBP19.37■□□□□ 0.69
BEST3-210ENST00000551160 RAD54L2Q9Y4B4 1467 aa19.35■□□□□ 0.69
BEST3-210ENST00000551160 TDRD9Q8NDG6 1382 aaKnown RBP19.35■□□□□ 0.69
BEST3-210ENST00000551160 SNAPC4Q5SXM2 1469 aa19.32■□□□□ 0.68
BEST3-210ENST00000551160 CLASP1Q7Z460 1538 aa19.3■□□□□ 0.68
BEST3-210ENST00000551160 SOGA1O94964 1423 aa19.28■□□□□ 0.68
BEST3-210ENST00000551160 CHMP7Q8WUX9 453 aaPredicted RBP19.25■□□□□ 0.67
BEST3-210ENST00000551160 SYNJ1O43426 1573 aa19.21■□□□□ 0.67
BEST3-210ENST00000551160 FGD5Q6ZNL6 1462 aa19.2■□□□□ 0.66
BEST3-210ENST00000551160 MAGI1Q96QZ7 1491 aaPredicted RBP19.2■□□□□ 0.66
BEST3-210ENST00000551160 GRIN2BQ13224 1484 aa19.16■□□□□ 0.66
BEST3-210ENST00000551160 SYNJ2O15056 1496 aa19.16■□□□□ 0.66
BEST3-210ENST00000551160 GAPVD1Q14C86 1478 aa19.16■□□□□ 0.66
BEST3-210ENST00000551160 WDR97A6NE52 1622 aa19.14■□□□□ 0.66
BEST3-210ENST00000551160 CUX1P39880 1505 aa19.11■□□□□ 0.65
BEST3-210ENST00000551160 ERCC6L2Q5T890 1561 aa19.01■□□□□ 0.63
BEST3-210ENST00000551160 PBRM1Q86U86 1689 aa18.96■□□□□ 0.63
BEST3-210ENST00000551160 ABCA10Q8WWZ4 1543 aa18.94■□□□□ 0.62
BEST3-210ENST00000551160 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
BEST3-210ENST00000551160 GRIN2AQ12879 1464 aa18.92■□□□□ 0.62
BEST3-210ENST00000551160 NUP160Q12769 1436 aa18.9■□□□□ 0.62
BEST3-210ENST00000551160 CEP170Q5SW79 1584 aa18.89■□□□□ 0.62
BEST3-210ENST00000551160 ADAMTS12P58397 1594 aa18.85■□□□□ 0.61
BEST3-210ENST00000551160 SHROOM2Q13796 1616 aa18.79■□□□□ 0.6
BEST3-210ENST00000551160 FHAD1B1AJZ9 1412 aa18.78■□□□□ 0.6
BEST3-210ENST00000551160 WRNQ14191 1432 aaPredicted RBP eCLIP18.77■□□□□ 0.6
BEST3-210ENST00000551160 PRG4Q92954 1404 aaPredicted RBP18.74■□□□□ 0.59
BEST3-210ENST00000551160 KIF13AQ9H1H9 1805 aa18.74■□□□□ 0.59
BEST3-210ENST00000551160 FAM69CQ0P6D2 419 aa18.73■□□□□ 0.59
BEST3-210ENST00000551160 ABCC10Q5T3U5 1492 aa18.71■□□□□ 0.59
BEST3-210ENST00000551160 KDM4FA0A1W2PPD8 638 aa18.68■□□□□ 0.58
BEST3-210ENST00000551160 JPH4Q96JJ6 628 aa18.68■□□□□ 0.58
BEST3-210ENST00000551160 ERICH3Q5RHP9 1530 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms