RNA–Protein interactions for RNA: ENST00000551147.1

PPFIA2-222, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-222ENST00000551147 NISCHQ9Y2I1 1504 aa29.54■■■□□ 2.32
PPFIA2-222ENST00000551147 CCDC180Q9P1Z9 1646 aa26.21■■□□□ 1.79
PPFIA2-222ENST00000551147 ABCC9O60706 1549 aa25.37■■□□□ 1.65
PPFIA2-222ENST00000551147 ZCCHC6Q5VYS8 1495 aaKnown RBP24.69■■□□□ 1.54
PPFIA2-222ENST00000551147 NACADO15069 1562 aa24.53■■□□□ 1.52
PPFIA2-222ENST00000551147 RB1CC1Q8TDY2 1594 aa24.5■■□□□ 1.51
PPFIA2-222ENST00000551147 MYO15BQ96JP2 1530 aa24.46■■□□□ 1.51
PPFIA2-222ENST00000551147 DCAF1Q9Y4B6 1507 aa24.45■■□□□ 1.51
PPFIA2-222ENST00000551147 DCAF8L2P0C7V8 631 aa24.41■■□□□ 1.5
PPFIA2-222ENST00000551147 UNC13AQ9UPW8 1703 aa24.03■■□□□ 1.44
PPFIA2-222ENST00000551147 SCRIBQ14160 1630 aa23.92■■□□□ 1.42
PPFIA2-222ENST00000551147 BICRAQ9NZM4 1560 aa23.83■■□□□ 1.41
PPFIA2-222ENST00000551147 DNAJC5BQ9UF47 199 aa23.7■■□□□ 1.38
PPFIA2-222ENST00000551147 PABPN1Q86U42 306 aaKnown RBP eCLIP23.69■■□□□ 1.38
PPFIA2-222ENST00000551147 SHROOM4Q9ULL8 1493 aa23.54■■□□□ 1.36
PPFIA2-222ENST00000551147 EIF4G1Q04637 1599 aaKnown RBP23.14■■□□□ 1.29
PPFIA2-222ENST00000551147 CECR2Q9BXF3 1484 aa23■■□□□ 1.27
PPFIA2-222ENST00000551147 CC2D2AQ9P2K1 1620 aa22.98■■□□□ 1.27
PPFIA2-222ENST00000551147 SMARCA4P51532 1647 aa22.9■■□□□ 1.26
PPFIA2-222ENST00000551147 BAZ1AQ9NRL2 1556 aaPredicted RBP22.87■■□□□ 1.25
PPFIA2-222ENST00000551147 MROH2BQ7Z745 1585 aa22.79■■□□□ 1.24
PPFIA2-222ENST00000551147 ATAD2BQ9ULI0 1458 aa22.68■■□□□ 1.22
PPFIA2-222ENST00000551147 PEG3Q9GZU2 1588 aa22.67■■□□□ 1.22
PPFIA2-222ENST00000551147 SMARCA2P51531 1590 aa22.66■■□□□ 1.22
PPFIA2-222ENST00000551147 NCAPD3P42695 1498 aa22.61■■□□□ 1.21
PPFIA2-222ENST00000551147 RSF1Q96T23 1441 aaPredicted RBP22.57■■□□□ 1.2
PPFIA2-222ENST00000551147 HMGXB3Q12766 1538 aa22.57■■□□□ 1.2
PPFIA2-222ENST00000551147 WIZO95785 1651 aa22.56■■□□□ 1.2
PPFIA2-222ENST00000551147 BAZ1BQ9UIG0 1483 aaKnown RBP22.49■■□□□ 1.19
PPFIA2-222ENST00000551147 AEBP2Q6ZN18 517 aaPredicted RBP22.38■■□□□ 1.17
PPFIA2-222ENST00000551147 TOP2AP11388 1531 aaKnown RBP22.33■■□□□ 1.17
PPFIA2-222ENST00000551147 CHIC1Q5VXU3 224 aa22.13■■□□□ 1.13
PPFIA2-222ENST00000551147 SUPT5HO00267 1087 aaKnown RBP22.07■■□□□ 1.12
PPFIA2-222ENST00000551147 NESP48681 1621 aa22.06■■□□□ 1.12
PPFIA2-222ENST00000551147 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
PPFIA2-222ENST00000551147 LAMC3Q9Y6N6 1575 aa22■■□□□ 1.11
PPFIA2-222ENST00000551147 CADPSQ9ULU8 1353 aa21.94■■□□□ 1.1
PPFIA2-222ENST00000551147 CFTRP13569 1480 aa21.9■■□□□ 1.1
PPFIA2-222ENST00000551147 KIF21AQ7Z4S6 1674 aa21.83■■□□□ 1.09
PPFIA2-222ENST00000551147 PRDM2Q13029 1718 aa21.82■■□□□ 1.08
PPFIA2-222ENST00000551147 CUX2O14529 1486 aa21.81■■□□□ 1.08
PPFIA2-222ENST00000551147 ERCC6Q03468 1493 aa21.81■■□□□ 1.08
PPFIA2-222ENST00000551147 PDS5BQ9NTI5 1447 aa21.79■■□□□ 1.08
PPFIA2-222ENST00000551147 DNAJC5Q9H3Z4 198 aa21.78■■□□□ 1.08
PPFIA2-222ENST00000551147 FANCD2Q9BXW9 1451 aa21.72■■□□□ 1.07
PPFIA2-222ENST00000551147 THOC2Q8NI27 1593 aaKnown RBP21.72■■□□□ 1.07
PPFIA2-222ENST00000551147 CEP164Q9UPV0 1460 aa21.68■■□□□ 1.06
PPFIA2-222ENST00000551147 MRC2Q9UBG0 1479 aa21.61■■□□□ 1.05
PPFIA2-222ENST00000551147 WDR62O43379 1518 aa21.56■■□□□ 1.04
PPFIA2-222ENST00000551147 URB2Q14146 1524 aaKnown RBP21.54■■□□□ 1.04
PPFIA2-222ENST00000551147 TOPBP1Q92547 1522 aa21.43■■□□□ 1.02
PPFIA2-222ENST00000551147 DNMBPQ6XZF7 1577 aa21.43■■□□□ 1.02
PPFIA2-222ENST00000551147 CUX1P39880 1505 aa21.38■■□□□ 1.01
PPFIA2-222ENST00000551147 ABCC8Q09428 1581 aa21.36■■□□□ 1.01
PPFIA2-222ENST00000551147 SYNJ1O43426 1573 aa21.27■■□□□ 1
PPFIA2-222ENST00000551147 POLA1P09884 1462 aaPredicted RBP21.26■□□□□ 0.99
PPFIA2-222ENST00000551147 BIVM-ERCC5R4GMW8 1640 aa21.26■□□□□ 0.99
PPFIA2-222ENST00000551147 WRNQ14191 1432 aaPredicted RBP eCLIP21.25■□□□□ 0.99
PPFIA2-222ENST00000551147 FGD5Q6ZNL6 1462 aa21.24■□□□□ 0.99
PPFIA2-222ENST00000551147 TOP2BQ02880 1626 aa21.23■□□□□ 0.99
PPFIA2-222ENST00000551147 TARBP1Q13395 1621 aaKnown RBP21.21■□□□□ 0.99
PPFIA2-222ENST00000551147 IFT140Q96RY7 1462 aa21.2■□□□□ 0.98
PPFIA2-222ENST00000551147 RAD54L2Q9Y4B4 1467 aa21.15■□□□□ 0.98
PPFIA2-222ENST00000551147 WDR97A6NE52 1622 aa21.14■□□□□ 0.97
PPFIA2-222ENST00000551147 ZNF608Q9ULD9 1512 aaPredicted RBP21.14■□□□□ 0.97
PPFIA2-222ENST00000551147 SOGA1O94964 1423 aa21.11■□□□□ 0.97
PPFIA2-222ENST00000551147 EIF4G3O43432 1585 aaKnown RBP21.1■□□□□ 0.97
PPFIA2-222ENST00000551147 ABCA10Q8WWZ4 1543 aa21.04■□□□□ 0.96
PPFIA2-222ENST00000551147 AQRO60306 1485 aaKnown RBP eCLIP21■□□□□ 0.95
PPFIA2-222ENST00000551147 ABCA5Q8WWZ7 1642 aa21■□□□□ 0.95
PPFIA2-222ENST00000551147 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
PPFIA2-222ENST00000551147 PBRM1Q86U86 1689 aa20.92■□□□□ 0.94
PPFIA2-222ENST00000551147 GAPVD1Q14C86 1478 aa20.89■□□□□ 0.94
PPFIA2-222ENST00000551147 GRIN2BQ13224 1484 aa20.87■□□□□ 0.93
PPFIA2-222ENST00000551147 SNAPC4Q5SXM2 1469 aa20.84■□□□□ 0.93
PPFIA2-222ENST00000551147 TRIM41Q8WV44 630 aa20.8■□□□□ 0.92
PPFIA2-222ENST00000551147 MAGI1Q96QZ7 1491 aaPredicted RBP20.8■□□□□ 0.92
PPFIA2-222ENST00000551147 ERICH3Q5RHP9 1530 aa20.78■□□□□ 0.92
PPFIA2-222ENST00000551147 CHD1O14646 1710 aa20.78■□□□□ 0.92
PPFIA2-222ENST00000551147 ADAMTS12P58397 1594 aa20.77■□□□□ 0.92
PPFIA2-222ENST00000551147 KIF27Q86VH2 1401 aa20.77■□□□□ 0.91
PPFIA2-222ENST00000551147 OSCARQ8IYS5 282 aa20.74■□□□□ 0.91
PPFIA2-222ENST00000551147 RUSC2Q8N2Y8 1516 aa20.72■□□□□ 0.91
PPFIA2-222ENST00000551147 SYNJ2O15056 1496 aa20.71■□□□□ 0.91
PPFIA2-222ENST00000551147 IGF1RP08069 1367 aa20.66■□□□□ 0.9
PPFIA2-222ENST00000551147 FHAD1B1AJZ9 1412 aa20.66■□□□□ 0.9
PPFIA2-222ENST00000551147 CUL7Q14999 1698 aa20.66■□□□□ 0.9
PPFIA2-222ENST00000551147 GRIN2AQ12879 1464 aa20.62■□□□□ 0.89
PPFIA2-222ENST00000551147 FBLN2P98095 1184 aa20.61■□□□□ 0.89
PPFIA2-222ENST00000551147 CHMP7Q8WUX9 453 aaPredicted RBP20.58■□□□□ 0.89
PPFIA2-222ENST00000551147 CLASP1Q7Z460 1538 aa20.56■□□□□ 0.88
PPFIA2-222ENST00000551147 CEP170Q5SW79 1584 aa20.55■□□□□ 0.88
PPFIA2-222ENST00000551147 NUP160Q12769 1436 aa20.53■□□□□ 0.88
PPFIA2-222ENST00000551147 CARMIL1Q5VZK9 1371 aa20.53■□□□□ 0.88
PPFIA2-222ENST00000551147 RIMBP3CA6NJZ7 1639 aa20.52■□□□□ 0.88
PPFIA2-222ENST00000551147 RIMBP3BA6NNM3 1639 aa20.52■□□□□ 0.88
PPFIA2-222ENST00000551147 RIMBP3Q9UFD9 1639 aa20.52■□□□□ 0.88
PPFIA2-222ENST00000551147 EEA1Q15075 1411 aa20.52■□□□□ 0.87
PPFIA2-222ENST00000551147 PRXQ9BXM0 1461 aa20.48■□□□□ 0.87
PPFIA2-222ENST00000551147 ARHGEF11O15085 1522 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms