RNA–Protein interactions for RNA: ENST00000550983.1

NPIPB9-202, Transcript of nuclear pore complex interacting protein family member B9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NPIPB9, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9-202ENST00000550983 NISCHQ9Y2I1 1504 aa16.83■□□□□ 0.28
NPIPB9-202ENST00000550983 CCDC180Q9P1Z9 1646 aa15.02□□□□□ -0.01
NPIPB9-202ENST00000550983 ABCC9O60706 1549 aa14.56□□□□□ -0.08
NPIPB9-202ENST00000550983 AEBP2Q6ZN18 517 aaPredicted RBP14.15□□□□□ -0.14
NPIPB9-202ENST00000550983 RB1CC1Q8TDY2 1594 aa14.12□□□□□ -0.15
NPIPB9-202ENST00000550983 NACADO15069 1562 aa14.11□□□□□ -0.15
NPIPB9-202ENST00000550983 CHIC1Q5VXU3 224 aa14.11□□□□□ -0.15
NPIPB9-202ENST00000550983 MYO15BQ96JP2 1530 aa14.07□□□□□ -0.16
NPIPB9-202ENST00000550983 ZCCHC6Q5VYS8 1495 aaKnown RBP14.01□□□□□ -0.17
NPIPB9-202ENST00000550983 DCAF8L2P0C7V8 631 aa14□□□□□ -0.17
NPIPB9-202ENST00000550983 DCAF1Q9Y4B6 1507 aa14□□□□□ -0.17
NPIPB9-202ENST00000550983 UNC13AQ9UPW8 1703 aa13.69□□□□□ -0.22
NPIPB9-202ENST00000550983 SHROOM4Q9ULL8 1493 aa13.62□□□□□ -0.23
NPIPB9-202ENST00000550983 BICRAQ9NZM4 1560 aa13.6□□□□□ -0.23
NPIPB9-202ENST00000550983 SCRIBQ14160 1630 aa13.6□□□□□ -0.23
NPIPB9-202ENST00000550983 PABPN1Q86U42 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
NPIPB9-202ENST00000550983 DNAJC5BQ9UF47 199 aa13.52□□□□□ -0.25
NPIPB9-202ENST00000550983 EIF4G1Q04637 1599 aaKnown RBP13.27□□□□□ -0.29
NPIPB9-202ENST00000550983 CC2D2AQ9P2K1 1620 aa13.2□□□□□ -0.3
NPIPB9-202ENST00000550983 CECR2Q9BXF3 1484 aa13.12□□□□□ -0.31
NPIPB9-202ENST00000550983 BAZ1AQ9NRL2 1556 aaPredicted RBP13.08□□□□□ -0.32
NPIPB9-202ENST00000550983 SMARCA4P51532 1647 aa13.05□□□□□ -0.32
NPIPB9-202ENST00000550983 SMARCA2P51531 1590 aa13.02□□□□□ -0.33
NPIPB9-202ENST00000550983 NCAPD3P42695 1498 aa13□□□□□ -0.33
NPIPB9-202ENST00000550983 ATAD2BQ9ULI0 1458 aa12.97□□□□□ -0.33
NPIPB9-202ENST00000550983 PEG3Q9GZU2 1588 aa12.95□□□□□ -0.34
NPIPB9-202ENST00000550983 HMGXB3Q12766 1538 aa12.95□□□□□ -0.34
NPIPB9-202ENST00000550983 MROH2BQ7Z745 1585 aa12.92□□□□□ -0.34
NPIPB9-202ENST00000550983 BAZ1BQ9UIG0 1483 aaKnown RBP12.89□□□□□ -0.35
NPIPB9-202ENST00000550983 RSF1Q96T23 1441 aaPredicted RBP12.8□□□□□ -0.36
NPIPB9-202ENST00000550983 WIZO95785 1651 aa12.78□□□□□ -0.36
NPIPB9-202ENST00000550983 TOP2AP11388 1531 aaKnown RBP12.71□□□□□ -0.37
NPIPB9-202ENST00000550983 LAMC3Q9Y6N6 1575 aa12.67□□□□□ -0.38
NPIPB9-202ENST00000550983 PHF23Q9BUL5 403 aaPredicted RBP12.65□□□□□ -0.38
NPIPB9-202ENST00000550983 DNAJC5Q9H3Z4 198 aa12.64□□□□□ -0.39
NPIPB9-202ENST00000550983 ERCC6Q03468 1493 aa12.61□□□□□ -0.39
NPIPB9-202ENST00000550983 CADPSQ9ULU8 1353 aa12.61□□□□□ -0.39
NPIPB9-202ENST00000550983 PDS5BQ9NTI5 1447 aa12.59□□□□□ -0.39
NPIPB9-202ENST00000550983 NESP48681 1621 aa12.58□□□□□ -0.4
NPIPB9-202ENST00000550983 PELP1Q8IZL8 1130 aaKnown RBP12.54□□□□□ -0.4
NPIPB9-202ENST00000550983 CFTRP13569 1480 aa12.53□□□□□ -0.4
NPIPB9-202ENST00000550983 CCDC88BA6NC98 1476 aa12.53□□□□□ -0.4
NPIPB9-202ENST00000550983 CUX2O14529 1486 aa12.52□□□□□ -0.41
NPIPB9-202ENST00000550983 KIF21AQ7Z4S6 1674 aa12.46□□□□□ -0.41
NPIPB9-202ENST00000550983 PRDM2Q13029 1718 aa12.46□□□□□ -0.41
NPIPB9-202ENST00000550983 SUPT5HO00267 1087 aaKnown RBP12.46□□□□□ -0.42
NPIPB9-202ENST00000550983 CEP164Q9UPV0 1460 aa12.45□□□□□ -0.42
NPIPB9-202ENST00000550983 FANCD2Q9BXW9 1451 aa12.45□□□□□ -0.42
NPIPB9-202ENST00000550983 THOC2Q8NI27 1593 aaKnown RBP12.44□□□□□ -0.42
NPIPB9-202ENST00000550983 MRC2Q9UBG0 1479 aa12.44□□□□□ -0.42
NPIPB9-202ENST00000550983 WDR62O43379 1518 aa12.38□□□□□ -0.43
NPIPB9-202ENST00000550983 MYT1Q01538 1121 aa12.35□□□□□ -0.43
NPIPB9-202ENST00000550983 ABCC8Q09428 1581 aa12.35□□□□□ -0.43
NPIPB9-202ENST00000550983 URB2Q14146 1524 aaKnown RBP12.29□□□□□ -0.44
NPIPB9-202ENST00000550983 SLC24A1O60721 1099 aa12.29□□□□□ -0.44
NPIPB9-202ENST00000550983 DNMBPQ6XZF7 1577 aa12.26□□□□□ -0.45
NPIPB9-202ENST00000550983 TOPBP1Q92547 1522 aa12.25□□□□□ -0.45
NPIPB9-202ENST00000550983 IFT140Q96RY7 1462 aa12.21□□□□□ -0.45
NPIPB9-202ENST00000550983 EHMT2Q96KQ7 1210 aa12.18□□□□□ -0.46
NPIPB9-202ENST00000550983 CUX1P39880 1505 aa12.13□□□□□ -0.47
NPIPB9-202ENST00000550983 POLA1P09884 1462 aaPredicted RBP12.13□□□□□ -0.47
NPIPB9-202ENST00000550983 WDR97A6NE52 1622 aa12.12□□□□□ -0.47
NPIPB9-202ENST00000550983 SOGA1O94964 1423 aa12.11□□□□□ -0.47
NPIPB9-202ENST00000550983 FGD5Q6ZNL6 1462 aa12.11□□□□□ -0.47
NPIPB9-202ENST00000550983 WRNQ14191 1432 aaPredicted RBP eCLIP12.1□□□□□ -0.47
NPIPB9-202ENST00000550983 TARBP1Q13395 1621 aaKnown RBP12.1□□□□□ -0.47
NPIPB9-202ENST00000550983 BIVM-ERCC5R4GMW8 1640 aa12.08□□□□□ -0.48
NPIPB9-202ENST00000550983 TOP2BQ02880 1626 aa12.08□□□□□ -0.48
NPIPB9-202ENST00000550983 ZNF608Q9ULD9 1512 aaPredicted RBP12.05□□□□□ -0.48
NPIPB9-202ENST00000550983 EIF4G3O43432 1585 aaKnown RBP12.05□□□□□ -0.48
NPIPB9-202ENST00000550983 RAD54L2Q9Y4B4 1467 aa12.04□□□□□ -0.48
NPIPB9-202ENST00000550983 ABCA10Q8WWZ4 1543 aa12.02□□□□□ -0.48
NPIPB9-202ENST00000550983 SYNJ1O43426 1573 aa12.01□□□□□ -0.49
NPIPB9-202ENST00000550983 AQRO60306 1485 aaKnown RBP eCLIP12□□□□□ -0.49
NPIPB9-202ENST00000550983 SENP3Q9H4L4 574 aaPredicted RBP11.99□□□□□ -0.49
NPIPB9-202ENST00000550983 GRIN2BQ13224 1484 aa11.99□□□□□ -0.49
NPIPB9-202ENST00000550983 TDRD9Q8NDG6 1382 aaKnown RBP11.99□□□□□ -0.49
NPIPB9-202ENST00000550983 OSCARQ8IYS5 282 aa11.98□□□□□ -0.49
NPIPB9-202ENST00000550983 GAPVD1Q14C86 1478 aa11.97□□□□□ -0.49
NPIPB9-202ENST00000550983 MAGI1Q96QZ7 1491 aaPredicted RBP11.97□□□□□ -0.49
NPIPB9-202ENST00000550983 ABCA5Q8WWZ7 1642 aa11.95□□□□□ -0.5
NPIPB9-202ENST00000550983 PBRM1Q86U86 1689 aa11.93□□□□□ -0.5
NPIPB9-202ENST00000550983 SNAPC4Q5SXM2 1469 aa11.92□□□□□ -0.5
NPIPB9-202ENST00000550983 SYNJ2O15056 1496 aa11.9□□□□□ -0.5
NPIPB9-202ENST00000550983 ERICH3Q5RHP9 1530 aa11.9□□□□□ -0.5
NPIPB9-202ENST00000550983 TRIM41Q8WV44 630 aa11.9□□□□□ -0.5
NPIPB9-202ENST00000550983 CHMP7Q8WUX9 453 aaPredicted RBP11.89□□□□□ -0.51
NPIPB9-202ENST00000550983 CHD1O14646 1710 aa11.89□□□□□ -0.51
NPIPB9-202ENST00000550983 KIF27Q86VH2 1401 aa11.87□□□□□ -0.51
NPIPB9-202ENST00000550983 FBLN2P98095 1184 aa11.87□□□□□ -0.51
NPIPB9-202ENST00000550983 FHAD1B1AJZ9 1412 aa11.86□□□□□ -0.51
NPIPB9-202ENST00000550983 ADAMTS12P58397 1594 aa11.84□□□□□ -0.51
NPIPB9-202ENST00000550983 TTBK1Q5TCY1 1321 aaPredicted RBP11.82□□□□□ -0.52
NPIPB9-202ENST00000550983 CUL7Q14999 1698 aa11.81□□□□□ -0.52
NPIPB9-202ENST00000550983 GRIN2AQ12879 1464 aa11.8□□□□□ -0.52
NPIPB9-202ENST00000550983 CLASP1Q7Z460 1538 aa11.78□□□□□ -0.52
NPIPB9-202ENST00000550983 IGF1RP08069 1367 aa11.78□□□□□ -0.52
NPIPB9-202ENST00000550983 HRCP23327 699 aa11.77□□□□□ -0.53
NPIPB9-202ENST00000550983 PLPPR3Q6T4P5 718 aa11.77□□□□□ -0.53
NPIPB9-202ENST00000550983 NUP160Q12769 1436 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms