RNA–Protein interactions for RNA: ENST00000550844.2

ATXN2-221, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-221ENST00000550844 NISCHQ9Y2I1 1504 aa20.6■□□□□ 0.89
ATXN2-221ENST00000550844 DCAF8L2P0C7V8 631 aa17.84■□□□□ 0.45
ATXN2-221ENST00000550844 CCDC180Q9P1Z9 1646 aa17.74■□□□□ 0.43
ATXN2-221ENST00000550844 ABCC9O60706 1549 aa17.61■□□□□ 0.41
ATXN2-221ENST00000550844 SHROOM4Q9ULL8 1493 aa17.28■□□□□ 0.36
ATXN2-221ENST00000550844 ZCCHC6Q5VYS8 1495 aaKnown RBP17.19■□□□□ 0.34
ATXN2-221ENST00000550844 PABPN1Q86U42 306 aaKnown RBP eCLIP16.79■□□□□ 0.28
ATXN2-221ENST00000550844 SCRIBQ14160 1630 aa16.76■□□□□ 0.27
ATXN2-221ENST00000550844 DCAF1Q9Y4B6 1507 aa16.73■□□□□ 0.27
ATXN2-221ENST00000550844 NACADO15069 1562 aa16.71■□□□□ 0.27
ATXN2-221ENST00000550844 RB1CC1Q8TDY2 1594 aa16.69■□□□□ 0.26
ATXN2-221ENST00000550844 MYO15BQ96JP2 1530 aa16.55■□□□□ 0.24
ATXN2-221ENST00000550844 SUPT5HO00267 1087 aaKnown RBP16.54■□□□□ 0.24
ATXN2-221ENST00000550844 UNC13AQ9UPW8 1703 aa16.36■□□□□ 0.21
ATXN2-221ENST00000550844 CECR2Q9BXF3 1484 aa16.27■□□□□ 0.19
ATXN2-221ENST00000550844 BICRAQ9NZM4 1560 aa16.27■□□□□ 0.19
ATXN2-221ENST00000550844 MROH2BQ7Z745 1585 aa16.05■□□□□ 0.16
ATXN2-221ENST00000550844 RSF1Q96T23 1441 aaPredicted RBP16.03■□□□□ 0.16
ATXN2-221ENST00000550844 DNAJC5BQ9UF47 199 aa15.92■□□□□ 0.14
ATXN2-221ENST00000550844 WIZO95785 1651 aa15.89■□□□□ 0.13
ATXN2-221ENST00000550844 BAZ1AQ9NRL2 1556 aaPredicted RBP15.86■□□□□ 0.13
ATXN2-221ENST00000550844 SMARCA4P51532 1647 aa15.84■□□□□ 0.13
ATXN2-221ENST00000550844 EIF4G1Q04637 1599 aaKnown RBP15.83■□□□□ 0.12
ATXN2-221ENST00000550844 ATAD2BQ9ULI0 1458 aa15.73■□□□□ 0.11
ATXN2-221ENST00000550844 CC2D2AQ9P2K1 1620 aa15.7■□□□□ 0.1
ATXN2-221ENST00000550844 BAZ1BQ9UIG0 1483 aaKnown RBP15.66■□□□□ 0.1
ATXN2-221ENST00000550844 CCDC88BA6NC98 1476 aa15.57■□□□□ 0.08
ATXN2-221ENST00000550844 SMARCA2P51531 1590 aa15.57■□□□□ 0.08
ATXN2-221ENST00000550844 NCAPD3P42695 1498 aa15.54■□□□□ 0.08
ATXN2-221ENST00000550844 TOP2AP11388 1531 aaKnown RBP15.53■□□□□ 0.08
ATXN2-221ENST00000550844 CHIC1Q5VXU3 224 aa15.47■□□□□ 0.07
ATXN2-221ENST00000550844 PEG3Q9GZU2 1588 aa15.47■□□□□ 0.07
ATXN2-221ENST00000550844 EHMT2Q96KQ7 1210 aa15.42■□□□□ 0.06
ATXN2-221ENST00000550844 FAM9AQ8IZU1 332 aaPredicted RBP15.39■□□□□ 0.05
ATXN2-221ENST00000550844 NESP48681 1621 aa15.38■□□□□ 0.05
ATXN2-221ENST00000550844 HMGXB3Q12766 1538 aa15.37■□□□□ 0.05
ATXN2-221ENST00000550844 TRIM41Q8WV44 630 aa15.37■□□□□ 0.05
ATXN2-221ENST00000550844 ABCC8Q09428 1581 aa15.29■□□□□ 0.04
ATXN2-221ENST00000550844 CADPSQ9ULU8 1353 aa15.26■□□□□ 0.03
ATXN2-221ENST00000550844 CFTRP13569 1480 aa15.17■□□□□ 0.02
ATXN2-221ENST00000550844 LOC105371045A0A1W2PR82 267 aa15.14■□□□□ 0.01
ATXN2-221ENST00000550844 WRNQ14191 1432 aaPredicted RBP eCLIP15.1■□□□□ 0.01
ATXN2-221ENST00000550844 FANCD2Q9BXW9 1451 aa15.1■□□□□ 0.01
ATXN2-221ENST00000550844 ERCC6Q03468 1493 aa15.05■□□□□ -0
ATXN2-221ENST00000550844 PDS5BQ9NTI5 1447 aa15.02□□□□□ -0.01
ATXN2-221ENST00000550844 SYNJ1O43426 1573 aa15□□□□□ -0.01
ATXN2-221ENST00000550844 SOGA1O94964 1423 aa15□□□□□ -0.01
ATXN2-221ENST00000550844 RUSC2Q8N2Y8 1516 aa14.99□□□□□ -0.01
ATXN2-221ENST00000550844 CEP164Q9UPV0 1460 aa14.98□□□□□ -0.01
ATXN2-221ENST00000550844 RANGAP1P46060 587 aaPredicted RBP14.98□□□□□ -0.01
ATXN2-221ENST00000550844 CUX1P39880 1505 aa14.97□□□□□ -0.01
ATXN2-221ENST00000550844 LAMC3Q9Y6N6 1575 aa14.97□□□□□ -0.01
ATXN2-221ENST00000550844 KIF21AQ7Z4S6 1674 aa14.95□□□□□ -0.02
ATXN2-221ENST00000550844 RAD54L2Q9Y4B4 1467 aa14.93□□□□□ -0.02
ATXN2-221ENST00000550844 URB2Q14146 1524 aaKnown RBP14.92□□□□□ -0.02
ATXN2-221ENST00000550844 TDRD9Q8NDG6 1382 aaKnown RBP14.89□□□□□ -0.03
ATXN2-221ENST00000550844 FGD5Q6ZNL6 1462 aa14.88□□□□□ -0.03
ATXN2-221ENST00000550844 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
ATXN2-221ENST00000550844 CSRNP3Q8WYN3 585 aa14.84□□□□□ -0.03
ATXN2-221ENST00000550844 UBTFP17480 764 aaKnown RBP14.83□□□□□ -0.04
ATXN2-221ENST00000550844 POLA1P09884 1462 aaPredicted RBP14.82□□□□□ -0.04
ATXN2-221ENST00000550844 CUX2O14529 1486 aa14.81□□□□□ -0.04
ATXN2-221ENST00000550844 TOP2BQ02880 1626 aa14.81□□□□□ -0.04
ATXN2-221ENST00000550844 MRC2Q9UBG0 1479 aa14.79□□□□□ -0.04
ATXN2-221ENST00000550844 FBLN2P98095 1184 aa14.79□□□□□ -0.04
ATXN2-221ENST00000550844 PRDM2Q13029 1718 aa14.78□□□□□ -0.04
ATXN2-221ENST00000550844 AQRO60306 1485 aaKnown RBP eCLIP14.77□□□□□ -0.047e-7■■■■□ 26.1
ATXN2-221ENST00000550844 DNMBPQ6XZF7 1577 aa14.76□□□□□ -0.05
ATXN2-221ENST00000550844 ZNF608Q9ULD9 1512 aaPredicted RBP14.74□□□□□ -0.05
ATXN2-221ENST00000550844 BIVM-ERCC5R4GMW8 1640 aa14.71□□□□□ -0.05
ATXN2-221ENST00000550844 KIF27Q86VH2 1401 aa14.7□□□□□ -0.06
ATXN2-221ENST00000550844 TTBK1Q5TCY1 1321 aaPredicted RBP14.67□□□□□ -0.06
ATXN2-221ENST00000550844 IGF1RP08069 1367 aa14.67□□□□□ -0.06
ATXN2-221ENST00000550844 THOC2Q8NI27 1593 aaKnown RBP14.65□□□□□ -0.06
ATXN2-221ENST00000550844 PPARGC1BQ86YN6 1023 aaKnown RBP14.65□□□□□ -0.06
ATXN2-221ENST00000550844 P3H3Q8IVL6 736 aa14.63□□□□□ -0.07
ATXN2-221ENST00000550844 WDR62O43379 1518 aa14.63□□□□□ -0.07
ATXN2-221ENST00000550844 RAPGEF2Q9Y4G8 1499 aa14.63□□□□□ -0.07
ATXN2-221ENST00000550844 GAPVD1Q14C86 1478 aa14.61□□□□□ -0.07
ATXN2-221ENST00000550844 CARMIL1Q5VZK9 1371 aa14.61□□□□□ -0.07
ATXN2-221ENST00000550844 ABCA10Q8WWZ4 1543 aa14.59□□□□□ -0.07
ATXN2-221ENST00000550844 CHMP7Q8WUX9 453 aaPredicted RBP14.58□□□□□ -0.08
ATXN2-221ENST00000550844 TARBP1Q13395 1621 aaKnown RBP14.56□□□□□ -0.08
ATXN2-221ENST00000550844 IFT140Q96RY7 1462 aa14.56□□□□□ -0.08
ATXN2-221ENST00000550844 EEA1Q15075 1411 aa14.53□□□□□ -0.08
ATXN2-221ENST00000550844 ATP1B4Q9UN42 357 aaPredicted RBP14.5□□□□□ -0.09
ATXN2-221ENST00000550844 SNAPC4Q5SXM2 1469 aa14.49□□□□□ -0.09
ATXN2-221ENST00000550844 GOLGA3Q08378 1498 aa14.48□□□□□ -0.09
ATXN2-221ENST00000550844 PRXQ9BXM0 1461 aa14.48□□□□□ -0.09
ATXN2-221ENST00000550844 ARID3CA6NKF2 412 aa14.47□□□□□ -0.09
ATXN2-221ENST00000550844 EIF4G3O43432 1585 aaKnown RBP14.47□□□□□ -0.09
ATXN2-221ENST00000550844 GRIN2BQ13224 1484 aa14.46□□□□□ -0.09
ATXN2-221ENST00000550844 ABCA5Q8WWZ7 1642 aa14.43□□□□□ -0.1
ATXN2-221ENST00000550844 CEP162Q5TB80 1403 aa14.43□□□□□ -0.1
ATXN2-221ENST00000550844 WDR97A6NE52 1622 aa14.42□□□□□ -0.1
ATXN2-221ENST00000550844 TNIKQ9UKE5 1360 aa14.41□□□□□ -0.1
ATXN2-221ENST00000550844 CLIP1P30622 1438 aa14.38□□□□□ -0.11
ATXN2-221ENST00000550844 FHAD1B1AJZ9 1412 aa14.37□□□□□ -0.11
ATXN2-221ENST00000550844 ERICH3Q5RHP9 1530 aa14.36□□□□□ -0.11
ATXN2-221ENST00000550844 PBRM1Q86U86 1689 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms