RNA–Protein interactions for RNA: ENST00000550533.1

CSRNP2-206, Transcript of cysteine and serine rich nuclear protein 2, humanhuman

TSL 2

Gene CSRNP2, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRNP2-206ENST00000550533 NISCHQ9Y2I1 1504 aa34.98■■■■□ 3.19
CSRNP2-206ENST00000550533 CCDC180Q9P1Z9 1646 aa31■■■□□ 2.55
CSRNP2-206ENST00000550533 ABCC9O60706 1549 aa30.87■■■□□ 2.53
CSRNP2-206ENST00000550533 DCAF8L2P0C7V8 631 aa29.67■■■□□ 2.34
CSRNP2-206ENST00000550533 RB1CC1Q8TDY2 1594 aa29.44■■■□□ 2.3
CSRNP2-206ENST00000550533 NACADO15069 1562 aa29.37■■■□□ 2.29
CSRNP2-206ENST00000550533 MYO15BQ96JP2 1530 aa29.08■■■□□ 2.25
CSRNP2-206ENST00000550533 ZCCHC6Q5VYS8 1495 aaKnown RBP29.01■■■□□ 2.23
CSRNP2-206ENST00000550533 PABPN1Q86U42 306 aaKnown RBP eCLIP28.98■■■□□ 2.23
CSRNP2-206ENST00000550533 DCAF1Q9Y4B6 1507 aa28.86■■■□□ 2.21
CSRNP2-206ENST00000550533 DNAJC5BQ9UF47 199 aa28.76■■■□□ 2.19
CSRNP2-206ENST00000550533 UNC13AQ9UPW8 1703 aa28.6■■■□□ 2.17
CSRNP2-206ENST00000550533 BICRAQ9NZM4 1560 aa28.57■■■□□ 2.16
CSRNP2-206ENST00000550533 SCRIBQ14160 1630 aa28.4■■■□□ 2.14
CSRNP2-206ENST00000550533 SHROOM4Q9ULL8 1493 aa28.18■■■□□ 2.1
CSRNP2-206ENST00000550533 EIF4G1Q04637 1599 aaKnown RBP27.84■■■□□ 2.05
CSRNP2-206ENST00000550533 CC2D2AQ9P2K1 1620 aa27.8■■■□□ 2.04
CSRNP2-206ENST00000550533 CECR2Q9BXF3 1484 aa27.76■■■□□ 2.04
CSRNP2-206ENST00000550533 NCAPD3P42695 1498 aa27.2■■□□□ 1.95
CSRNP2-206ENST00000550533 ATAD2BQ9ULI0 1458 aa27.16■■□□□ 1.94
CSRNP2-206ENST00000550533 SMARCA4P51532 1647 aa27.11■■□□□ 1.93
CSRNP2-206ENST00000550533 BAZ1AQ9NRL2 1556 aaPredicted RBP27.08■■□□□ 1.93
CSRNP2-206ENST00000550533 SMARCA2P51531 1590 aa27.03■■□□□ 1.92
CSRNP2-206ENST00000550533 MROH2BQ7Z745 1585 aa26.97■■□□□ 1.91
CSRNP2-206ENST00000550533 HMGXB3Q12766 1538 aa26.89■■□□□ 1.89
CSRNP2-206ENST00000550533 BAZ1BQ9UIG0 1483 aaKnown RBP26.88■■□□□ 1.89
CSRNP2-206ENST00000550533 PEG3Q9GZU2 1588 aa26.84■■□□□ 1.89
CSRNP2-206ENST00000550533 RSF1Q96T23 1441 aaPredicted RBP26.63■■□□□ 1.85
CSRNP2-206ENST00000550533 NESP48681 1621 aa26.62■■□□□ 1.85
CSRNP2-206ENST00000550533 ERCC6Q03468 1493 aa26.62■■□□□ 1.85
CSRNP2-206ENST00000550533 WIZO95785 1651 aa26.6■■□□□ 1.85
CSRNP2-206ENST00000550533 CADPSQ9ULU8 1353 aa26.45■■□□□ 1.82
CSRNP2-206ENST00000550533 LAMC3Q9Y6N6 1575 aa26.39■■□□□ 1.82
CSRNP2-206ENST00000550533 PDS5BQ9NTI5 1447 aa26.38■■□□□ 1.81
CSRNP2-206ENST00000550533 CUX2O14529 1486 aa26.36■■□□□ 1.81
CSRNP2-206ENST00000550533 TOP2AP11388 1531 aaKnown RBP26.28■■□□□ 1.8
CSRNP2-206ENST00000550533 CFTRP13569 1480 aa26.16■■□□□ 1.78
CSRNP2-206ENST00000550533 CCDC88BA6NC98 1476 aa26.11■■□□□ 1.77
CSRNP2-206ENST00000550533 DNAJC5Q9H3Z4 198 aa26.11■■□□□ 1.77
CSRNP2-206ENST00000550533 KIF21AQ7Z4S6 1674 aa26.1■■□□□ 1.77
CSRNP2-206ENST00000550533 THOC2Q8NI27 1593 aaKnown RBP26.08■■□□□ 1.77
CSRNP2-206ENST00000550533 FANCD2Q9BXW9 1451 aa26.07■■□□□ 1.76
CSRNP2-206ENST00000550533 MRC2Q9UBG0 1479 aa26.04■■□□□ 1.76
CSRNP2-206ENST00000550533 CEP164Q9UPV0 1460 aa26.02■■□□□ 1.76
CSRNP2-206ENST00000550533 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
CSRNP2-206ENST00000550533 WDR62O43379 1518 aa25.9■■□□□ 1.74
CSRNP2-206ENST00000550533 URB2Q14146 1524 aaKnown RBP25.8■■□□□ 1.72
CSRNP2-206ENST00000550533 PRDM2Q13029 1718 aa25.61■■□□□ 1.69
CSRNP2-206ENST00000550533 TOPBP1Q92547 1522 aa25.59■■□□□ 1.69
CSRNP2-206ENST00000550533 ABCC8Q09428 1581 aa25.59■■□□□ 1.69
CSRNP2-206ENST00000550533 IFT140Q96RY7 1462 aa25.52■■□□□ 1.68
CSRNP2-206ENST00000550533 OSCARQ8IYS5 282 aa25.47■■□□□ 1.67
CSRNP2-206ENST00000550533 DNMBPQ6XZF7 1577 aa25.47■■□□□ 1.67
CSRNP2-206ENST00000550533 ZNF608Q9ULD9 1512 aaPredicted RBP25.45■■□□□ 1.66
CSRNP2-206ENST00000550533 SOGA1O94964 1423 aa25.37■■□□□ 1.65
CSRNP2-206ENST00000550533 POLA1P09884 1462 aaPredicted RBP25.36■■□□□ 1.65
CSRNP2-206ENST00000550533 AQRO60306 1485 aaKnown RBP eCLIP25.34■■□□□ 1.65
CSRNP2-206ENST00000550533 RAD54L2Q9Y4B4 1467 aa25.33■■□□□ 1.65
CSRNP2-206ENST00000550533 TDRD9Q8NDG6 1382 aaKnown RBP25.3■■□□□ 1.64
CSRNP2-206ENST00000550533 CUX1P39880 1505 aa25.29■■□□□ 1.64
CSRNP2-206ENST00000550533 TARBP1Q13395 1621 aaKnown RBP25.26■■□□□ 1.63
CSRNP2-206ENST00000550533 FGD5Q6ZNL6 1462 aa25.26■■□□□ 1.63
CSRNP2-206ENST00000550533 FBLN2P98095 1184 aa25.22■■□□□ 1.63
CSRNP2-206ENST00000550533 EIF4G3O43432 1585 aaKnown RBP25.17■■□□□ 1.62
CSRNP2-206ENST00000550533 TRIM41Q8WV44 630 aa25.15■■□□□ 1.62
CSRNP2-206ENST00000550533 WRNQ14191 1432 aaPredicted RBP eCLIP25.09■■□□□ 1.61
CSRNP2-206ENST00000550533 CHMP7Q8WUX9 453 aaPredicted RBP25.08■■□□□ 1.61
CSRNP2-206ENST00000550533 GRIN2BQ13224 1484 aa25.02■■□□□ 1.6
CSRNP2-206ENST00000550533 GAPVD1Q14C86 1478 aa25■■□□□ 1.59
CSRNP2-206ENST00000550533 SNAPC4Q5SXM2 1469 aa24.99■■□□□ 1.59
CSRNP2-206ENST00000550533 ABCA10Q8WWZ4 1543 aa24.99■■□□□ 1.59
CSRNP2-206ENST00000550533 WDR97A6NE52 1622 aa24.97■■□□□ 1.59
CSRNP2-206ENST00000550533 TOP2BQ02880 1626 aa24.94■■□□□ 1.58
CSRNP2-206ENST00000550533 SYNJ1O43426 1573 aa24.93■■□□□ 1.58
CSRNP2-206ENST00000550533 MAGI1Q96QZ7 1491 aaPredicted RBP24.93■■□□□ 1.58
CSRNP2-206ENST00000550533 BIVM-ERCC5R4GMW8 1640 aa24.87■■□□□ 1.57
CSRNP2-206ENST00000550533 CYB5RLQ6IPT4 315 aa24.87■■□□□ 1.57
CSRNP2-206ENST00000550533 SYNJ2O15056 1496 aa24.87■■□□□ 1.57
CSRNP2-206ENST00000550533 CHD1O14646 1710 aa24.86■■□□□ 1.57
CSRNP2-206ENST00000550533 ARHGEF11O15085 1522 aa24.83■■□□□ 1.57
CSRNP2-206ENST00000550533 RIMBP3CA6NJZ7 1639 aa24.8■■□□□ 1.56
CSRNP2-206ENST00000550533 RIMBP3BA6NNM3 1639 aa24.8■■□□□ 1.56
CSRNP2-206ENST00000550533 ABCA5Q8WWZ7 1642 aa24.8■■□□□ 1.56
CSRNP2-206ENST00000550533 RIMBP3Q9UFD9 1639 aa24.8■■□□□ 1.56
CSRNP2-206ENST00000550533 PBRM1Q86U86 1689 aa24.72■■□□□ 1.55
CSRNP2-206ENST00000550533 FHAD1B1AJZ9 1412 aa24.7■■□□□ 1.55
CSRNP2-206ENST00000550533 CLASP1Q7Z460 1538 aa24.67■■□□□ 1.54
CSRNP2-206ENST00000550533 GRIN2AQ12879 1464 aa24.66■■□□□ 1.54
CSRNP2-206ENST00000550533 ERICH3Q5RHP9 1530 aa24.66■■□□□ 1.54
CSRNP2-206ENST00000550533 IGF1RP08069 1367 aa24.64■■□□□ 1.53
CSRNP2-206ENST00000550533 ARAP1Q96P48 1450 aa24.62■■□□□ 1.53
CSRNP2-206ENST00000550533 KIF27Q86VH2 1401 aa24.61■■□□□ 1.53
CSRNP2-206ENST00000550533 ADAMTS12P58397 1594 aa24.59■■□□□ 1.53
CSRNP2-206ENST00000550533 NUP160Q12769 1436 aa24.58■■□□□ 1.53
CSRNP2-206ENST00000550533 JPH4Q96JJ6 628 aa24.52■■□□□ 1.52
CSRNP2-206ENST00000550533 CEP170Q5SW79 1584 aa24.5■■□□□ 1.51
CSRNP2-206ENST00000550533 CARMIL1Q5VZK9 1371 aa24.45■■□□□ 1.5
CSRNP2-206ENST00000550533 TRHP20396 242 aaPredicted RBP24.45■■□□□ 1.5
CSRNP2-206ENST00000550533 PRG4Q92954 1404 aaPredicted RBP24.39■■□□□ 1.5
CSRNP2-206ENST00000550533 ERCC6L2Q5T890 1561 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms