RNA–Protein interactions for RNA: ENST00000550333.5

C12orf29-207, Transcript of chromosome 12 open reading frame 29, humanhuman

TSL 1 (best)

Gene C12orf29, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf29-207ENST00000550333 NISCHQ9Y2I1 1504 aa25.97■■□□□ 1.75
C12orf29-207ENST00000550333 CCDC180Q9P1Z9 1646 aa22.58■■□□□ 1.2
C12orf29-207ENST00000550333 ZCCHC6Q5VYS8 1495 aaKnown RBP21.77■■□□□ 1.08
C12orf29-207ENST00000550333 DCAF8L2P0C7V8 631 aa21.73■■□□□ 1.07
C12orf29-207ENST00000550333 ABCC9O60706 1549 aa21.64■■□□□ 1.06
C12orf29-207ENST00000550333 DCAF1Q9Y4B6 1507 aa21.39■■□□□ 1.01
C12orf29-207ENST00000550333 SHROOM4Q9ULL8 1493 aa21.3■■□□□ 1
C12orf29-207ENST00000550333 MYO15BQ96JP2 1530 aa21.16■□□□□ 0.98
C12orf29-207ENST00000550333 NACADO15069 1562 aa21.11■□□□□ 0.97
C12orf29-207ENST00000550333 RB1CC1Q8TDY2 1594 aa20.97■□□□□ 0.95
C12orf29-207ENST00000550333 SCRIBQ14160 1630 aa20.89■□□□□ 0.93
C12orf29-207ENST00000550333 UNC13AQ9UPW8 1703 aa20.54■□□□□ 0.88
C12orf29-207ENST00000550333 PABPN1Q86U42 306 aaKnown RBP eCLIP20.48■□□□□ 0.87
C12orf29-207ENST00000550333 SUPT5HO00267 1087 aaKnown RBP20.47■□□□□ 0.87
C12orf29-207ENST00000550333 BICRAQ9NZM4 1560 aa20.37■□□□□ 0.85
C12orf29-207ENST00000550333 CECR2Q9BXF3 1484 aa20.26■□□□□ 0.83
C12orf29-207ENST00000550333 RSF1Q96T23 1441 aaPredicted RBP20.16■□□□□ 0.82
C12orf29-207ENST00000550333 MROH2BQ7Z745 1585 aa20.1■□□□□ 0.81
C12orf29-207ENST00000550333 BAZ1AQ9NRL2 1556 aaPredicted RBP20.04■□□□□ 0.8
C12orf29-207ENST00000550333 SMARCA4P51532 1647 aa19.96■□□□□ 0.79
C12orf29-207ENST00000550333 WIZO95785 1651 aa19.93■□□□□ 0.78
C12orf29-207ENST00000550333 EIF4G1Q04637 1599 aaKnown RBP19.77■□□□□ 0.76
C12orf29-207ENST00000550333 ATAD2BQ9ULI0 1458 aa19.7■□□□□ 0.74
C12orf29-207ENST00000550333 PEG3Q9GZU2 1588 aa19.68■□□□□ 0.74
C12orf29-207ENST00000550333 TOP2AP11388 1531 aaKnown RBP19.65■□□□□ 0.74
C12orf29-207ENST00000550333 SMARCA2P51531 1590 aa19.64■□□□□ 0.73
C12orf29-207ENST00000550333 BAZ1BQ9UIG0 1483 aaKnown RBP19.58■□□□□ 0.73
C12orf29-207ENST00000550333 NCAPD3P42695 1498 aa19.53■□□□□ 0.72
C12orf29-207ENST00000550333 CCDC88BA6NC98 1476 aa19.53■□□□□ 0.72
C12orf29-207ENST00000550333 CC2D2AQ9P2K1 1620 aa19.52■□□□□ 0.71
C12orf29-207ENST00000550333 CHIC1Q5VXU3 224 aa19.47■□□□□ 0.71
C12orf29-207ENST00000550333 HMGXB3Q12766 1538 aa19.43■□□□□ 0.7
C12orf29-207ENST00000550333 DNAJC5BQ9UF47 199 aa19.27■□□□□ 0.67
C12orf29-207ENST00000550333 TRIM41Q8WV44 630 aa19.2■□□□□ 0.66
C12orf29-207ENST00000550333 ABCC8Q09428 1581 aa19.1■□□□□ 0.65
C12orf29-207ENST00000550333 CFTRP13569 1480 aa19.08■□□□□ 0.64
C12orf29-207ENST00000550333 CADPSQ9ULU8 1353 aa19.06■□□□□ 0.64
C12orf29-207ENST00000550333 NESP48681 1621 aa18.97■□□□□ 0.63
C12orf29-207ENST00000550333 WRNQ14191 1432 aaPredicted RBP eCLIP18.97■□□□□ 0.63
C12orf29-207ENST00000550333 FAM9AQ8IZU1 332 aaPredicted RBP18.93■□□□□ 0.62
C12orf29-207ENST00000550333 SYNJ1O43426 1573 aa18.87■□□□□ 0.61
C12orf29-207ENST00000550333 PRDM2Q13029 1718 aa18.86■□□□□ 0.61
C12orf29-207ENST00000550333 LAMC3Q9Y6N6 1575 aa18.85■□□□□ 0.61
C12orf29-207ENST00000550333 FANCD2Q9BXW9 1451 aa18.85■□□□□ 0.61
C12orf29-207ENST00000550333 LOC105371045A0A1W2PR82 267 aa18.81■□□□□ 0.6
C12orf29-207ENST00000550333 CUX1P39880 1505 aa18.78■□□□□ 0.6
C12orf29-207ENST00000550333 TOP2BQ02880 1626 aa18.77■□□□□ 0.59
C12orf29-207ENST00000550333 PDS5BQ9NTI5 1447 aa18.76■□□□□ 0.59
C12orf29-207ENST00000550333 SOGA1O94964 1423 aa18.75■□□□□ 0.59
C12orf29-207ENST00000550333 EHMT2Q96KQ7 1210 aa18.73■□□□□ 0.59
C12orf29-207ENST00000550333 CEP164Q9UPV0 1460 aa18.72■□□□□ 0.59
C12orf29-207ENST00000550333 BIVM-ERCC5R4GMW8 1640 aa18.72■□□□□ 0.59
C12orf29-207ENST00000550333 RUSC2Q8N2Y8 1516 aa18.7■□□□□ 0.58
C12orf29-207ENST00000550333 KIF21AQ7Z4S6 1674 aa18.66■□□□□ 0.58
C12orf29-207ENST00000550333 CSRNP3Q8WYN3 585 aa18.62■□□□□ 0.57
C12orf29-207ENST00000550333 TOPBP1Q92547 1522 aa18.61■□□□□ 0.57
C12orf29-207ENST00000550333 URB2Q14146 1524 aaKnown RBP18.61■□□□□ 0.57
C12orf29-207ENST00000550333 FGD5Q6ZNL6 1462 aa18.6■□□□□ 0.57
C12orf29-207ENST00000550333 DNMBPQ6XZF7 1577 aa18.6■□□□□ 0.57
C12orf29-207ENST00000550333 EEA1Q15075 1411 aa18.58■□□□□ 0.56
C12orf29-207ENST00000550333 ERCC6Q03468 1493 aa18.55■□□□□ 0.56
C12orf29-207ENST00000550333 POLA1P09884 1462 aaPredicted RBP18.53■□□□□ 0.56
C12orf29-207ENST00000550333 RAD54L2Q9Y4B4 1467 aa18.52■□□□□ 0.56
C12orf29-207ENST00000550333 MRC2Q9UBG0 1479 aa18.5■□□□□ 0.55
C12orf29-207ENST00000550333 CUX2O14529 1486 aa18.49■□□□□ 0.55
C12orf29-207ENST00000550333 KIF27Q86VH2 1401 aa18.49■□□□□ 0.55
C12orf29-207ENST00000550333 UBTFP17480 764 aaKnown RBP18.43■□□□□ 0.54
C12orf29-207ENST00000550333 ABCA10Q8WWZ4 1543 aa18.4■□□□□ 0.54
C12orf29-207ENST00000550333 TDRD9Q8NDG6 1382 aaKnown RBP18.38■□□□□ 0.53
C12orf29-207ENST00000550333 IGF1RP08069 1367 aa18.38■□□□□ 0.53
C12orf29-207ENST00000550333 WDR62O43379 1518 aa18.38■□□□□ 0.53
C12orf29-207ENST00000550333 GOLGA3Q08378 1498 aa18.35■□□□□ 0.53
C12orf29-207ENST00000550333 RAPGEF2Q9Y4G8 1499 aa18.35■□□□□ 0.53
C12orf29-207ENST00000550333 THOC2Q8NI27 1593 aaKnown RBP18.34■□□□□ 0.53
C12orf29-207ENST00000550333 KIF21BO75037 1637 aa18.32■□□□□ 0.52
C12orf29-207ENST00000550333 PRXQ9BXM0 1461 aa18.32■□□□□ 0.52
C12orf29-207ENST00000550333 TARBP1Q13395 1621 aaKnown RBP18.32■□□□□ 0.52
C12orf29-207ENST00000550333 TNIKQ9UKE5 1360 aa18.3■□□□□ 0.52
C12orf29-207ENST00000550333 WDR97A6NE52 1622 aa18.29■□□□□ 0.52
C12orf29-207ENST00000550333 CARMIL1Q5VZK9 1371 aa18.28■□□□□ 0.52
C12orf29-207ENST00000550333 GAPVD1Q14C86 1478 aa18.27■□□□□ 0.52
C12orf29-207ENST00000550333 AQRO60306 1485 aaKnown RBP eCLIP18.26■□□□□ 0.51
C12orf29-207ENST00000550333 IFT140Q96RY7 1462 aa18.26■□□□□ 0.51
C12orf29-207ENST00000550333 RANGAP1P46060 587 aaPredicted RBP18.24■□□□□ 0.51
C12orf29-207ENST00000550333 ZNF608Q9ULD9 1512 aaPredicted RBP18.24■□□□□ 0.51
C12orf29-207ENST00000550333 ABCA5Q8WWZ7 1642 aa18.23■□□□□ 0.51
C12orf29-207ENST00000550333 ERICH3Q5RHP9 1530 aa18.22■□□□□ 0.51
C12orf29-207ENST00000550333 CEP162Q5TB80 1403 aa18.22■□□□□ 0.51
C12orf29-207ENST00000550333 GRIN2BQ13224 1484 aa18.12■□□□□ 0.49
C12orf29-207ENST00000550333 CUL7Q14999 1698 aa18.12■□□□□ 0.49
C12orf29-207ENST00000550333 PBRM1Q86U86 1689 aa18.1■□□□□ 0.49
C12orf29-207ENST00000550333 CLIP1P30622 1438 aa18.1■□□□□ 0.49
C12orf29-207ENST00000550333 EIF4G3O43432 1585 aaKnown RBP18.09■□□□□ 0.49
C12orf29-207ENST00000550333 FHAD1B1AJZ9 1412 aa18.05■□□□□ 0.48
C12orf29-207ENST00000550333 SNAPC4Q5SXM2 1469 aa18.03■□□□□ 0.48
C12orf29-207ENST00000550333 FBLN2P98095 1184 aa18■□□□□ 0.47
C12orf29-207ENST00000550333 ADAMTS12P58397 1594 aa18■□□□□ 0.47
C12orf29-207ENST00000550333 PPARGC1BQ86YN6 1023 aaKnown RBP17.99■□□□□ 0.47
C12orf29-207ENST00000550333 CHMP7Q8WUX9 453 aaPredicted RBP17.98■□□□□ 0.47
C12orf29-207ENST00000550333 P3H3Q8IVL6 736 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms