RNA–Protein interactions for RNA: ENST00000550190.1

CACNB3-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 424 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-215ENST00000550190 NISCHQ9Y2I1 1504 aa21.17■□□□□ 0.98
CACNB3-215ENST00000550190 CCDC180Q9P1Z9 1646 aa18.69■□□□□ 0.58
CACNB3-215ENST00000550190 ABCC9O60706 1549 aa18.05■□□□□ 0.48
CACNB3-215ENST00000550190 DCAF8L2P0C7V8 631 aa17.71■□□□□ 0.43
CACNB3-215ENST00000550190 ZCCHC6Q5VYS8 1495 aaKnown RBP17.68■□□□□ 0.42
CACNB3-215ENST00000550190 NACADO15069 1562 aa17.49■□□□□ 0.39
CACNB3-215ENST00000550190 DCAF1Q9Y4B6 1507 aa17.47■□□□□ 0.39
CACNB3-215ENST00000550190 RB1CC1Q8TDY2 1594 aa17.46■□□□□ 0.39
CACNB3-215ENST00000550190 MYO15BQ96JP2 1530 aa17.41■□□□□ 0.38
CACNB3-215ENST00000550190 SCRIBQ14160 1630 aa17.14■□□□□ 0.33
CACNB3-215ENST00000550190 UNC13AQ9UPW8 1703 aa17.13■□□□□ 0.33
CACNB3-215ENST00000550190 SHROOM4Q9ULL8 1493 aa17.02■□□□□ 0.32
CACNB3-215ENST00000550190 PABPN1Q86U42 306 aaKnown RBP eCLIP16.94■□□□□ 0.3
CACNB3-215ENST00000550190 BICRAQ9NZM4 1560 aa16.9■□□□□ 0.3
CACNB3-215ENST00000550190 CECR2Q9BXF3 1484 aa16.48■□□□□ 0.23
CACNB3-215ENST00000550190 EIF4G1Q04637 1599 aaKnown RBP16.44■□□□□ 0.22
CACNB3-215ENST00000550190 BAZ1AQ9NRL2 1556 aaPredicted RBP16.38■□□□□ 0.21
CACNB3-215ENST00000550190 SMARCA4P51532 1647 aa16.38■□□□□ 0.21
CACNB3-215ENST00000550190 MROH2BQ7Z745 1585 aa16.34■□□□□ 0.21
CACNB3-215ENST00000550190 CC2D2AQ9P2K1 1620 aa16.33■□□□□ 0.2
CACNB3-215ENST00000550190 DNAJC5BQ9UF47 199 aa16.27■□□□□ 0.2
CACNB3-215ENST00000550190 RSF1Q96T23 1441 aaPredicted RBP16.24■□□□□ 0.19
CACNB3-215ENST00000550190 WIZO95785 1651 aa16.23■□□□□ 0.19
CACNB3-215ENST00000550190 SMARCA2P51531 1590 aa16.19■□□□□ 0.18
CACNB3-215ENST00000550190 ATAD2BQ9ULI0 1458 aa16.19■□□□□ 0.18
CACNB3-215ENST00000550190 SUPT5HO00267 1087 aaKnown RBP16.19■□□□□ 0.18
CACNB3-215ENST00000550190 PEG3Q9GZU2 1588 aa16.16■□□□□ 0.18
CACNB3-215ENST00000550190 NCAPD3P42695 1498 aa16.11■□□□□ 0.17
CACNB3-215ENST00000550190 BAZ1BQ9UIG0 1483 aaKnown RBP16.1■□□□□ 0.17
CACNB3-215ENST00000550190 HMGXB3Q12766 1538 aa16.06■□□□□ 0.16
CACNB3-215ENST00000550190 TOP2AP11388 1531 aaKnown RBP16.02■□□□□ 0.15
CACNB3-215ENST00000550190 CCDC88BA6NC98 1476 aa15.84■□□□□ 0.13
CACNB3-215ENST00000550190 NESP48681 1621 aa15.7■□□□□ 0.1
CACNB3-215ENST00000550190 CADPSQ9ULU8 1353 aa15.68■□□□□ 0.1
CACNB3-215ENST00000550190 LAMC3Q9Y6N6 1575 aa15.67■□□□□ 0.1
CACNB3-215ENST00000550190 CFTRP13569 1480 aa15.64■□□□□ 0.09
CACNB3-215ENST00000550190 PRDM2Q13029 1718 aa15.63■□□□□ 0.09
CACNB3-215ENST00000550190 KIF21AQ7Z4S6 1674 aa15.56■□□□□ 0.08
CACNB3-215ENST00000550190 PDS5BQ9NTI5 1447 aa15.55■□□□□ 0.08
CACNB3-215ENST00000550190 ERCC6Q03468 1493 aa15.53■□□□□ 0.08
CACNB3-215ENST00000550190 FANCD2Q9BXW9 1451 aa15.52■□□□□ 0.08
CACNB3-215ENST00000550190 CEP164Q9UPV0 1460 aa15.48■□□□□ 0.07
CACNB3-215ENST00000550190 ABCC8Q09428 1581 aa15.4■□□□□ 0.06
CACNB3-215ENST00000550190 MRC2Q9UBG0 1479 aa15.39■□□□□ 0.05
CACNB3-215ENST00000550190 THOC2Q8NI27 1593 aaKnown RBP15.37■□□□□ 0.05
CACNB3-215ENST00000550190 URB2Q14146 1524 aaKnown RBP15.34■□□□□ 0.05
CACNB3-215ENST00000550190 WRNQ14191 1432 aaPredicted RBP eCLIP15.33■□□□□ 0.04
CACNB3-215ENST00000550190 DNMBPQ6XZF7 1577 aa15.32■□□□□ 0.04
CACNB3-215ENST00000550190 CUX1P39880 1505 aa15.31■□□□□ 0.04
CACNB3-215ENST00000550190 TOPBP1Q92547 1522 aa15.31■□□□□ 0.04
CACNB3-215ENST00000550190 WDR62O43379 1518 aa15.3■□□□□ 0.04
CACNB3-215ENST00000550190 SYNJ1O43426 1573 aa15.28■□□□□ 0.04
CACNB3-215ENST00000550190 BIVM-ERCC5R4GMW8 1640 aa15.26■□□□□ 0.03
CACNB3-215ENST00000550190 TOP2BQ02880 1626 aa15.25■□□□□ 0.03
CACNB3-215ENST00000550190 TRIM41Q8WV44 630 aa15.24■□□□□ 0.03
CACNB3-215ENST00000550190 CHIC1Q5VXU3 224 aa15.23■□□□□ 0.03
CACNB3-215ENST00000550190 FGD5Q6ZNL6 1462 aa15.22■□□□□ 0.03
CACNB3-215ENST00000550190 POLA1P09884 1462 aaPredicted RBP15.2■□□□□ 0.02
CACNB3-215ENST00000550190 CUX2O14529 1486 aa15.19■□□□□ 0.02
CACNB3-215ENST00000550190 SOGA1O94964 1423 aa15.17■□□□□ 0.02
CACNB3-215ENST00000550190 RAD54L2Q9Y4B4 1467 aa15.16■□□□□ 0.02
CACNB3-215ENST00000550190 IFT140Q96RY7 1462 aa15.12■□□□□ 0.01
CACNB3-215ENST00000550190 TARBP1Q13395 1621 aaKnown RBP15.11■□□□□ 0.01
CACNB3-215ENST00000550190 WDR97A6NE52 1622 aa15.08■□□□□ 0
CACNB3-215ENST00000550190 TDRD9Q8NDG6 1382 aaKnown RBP15.05■□□□□ -0
CACNB3-215ENST00000550190 ABCA10Q8WWZ4 1543 aa15.05■□□□□ -0
CACNB3-215ENST00000550190 ZNF608Q9ULD9 1512 aaPredicted RBP15.05■□□□□ -0
CACNB3-215ENST00000550190 AQRO60306 1485 aaKnown RBP eCLIP15.02■□□□□ -0
CACNB3-215ENST00000550190 EIF4G3O43432 1585 aaKnown RBP15.01□□□□□ -0.01
CACNB3-215ENST00000550190 KIF27Q86VH2 1401 aa14.99□□□□□ -0.01
CACNB3-215ENST00000550190 RUSC2Q8N2Y8 1516 aa14.98□□□□□ -0.01
CACNB3-215ENST00000550190 PBRM1Q86U86 1689 aa14.98□□□□□ -0.01
CACNB3-215ENST00000550190 GAPVD1Q14C86 1478 aa14.98□□□□□ -0.01
CACNB3-215ENST00000550190 FAM9AQ8IZU1 332 aaPredicted RBP14.98□□□□□ -0.01
CACNB3-215ENST00000550190 ABCA5Q8WWZ7 1642 aa14.98□□□□□ -0.01
CACNB3-215ENST00000550190 GRIN2BQ13224 1484 aa14.93□□□□□ -0.02
CACNB3-215ENST00000550190 ERICH3Q5RHP9 1530 aa14.88□□□□□ -0.03
CACNB3-215ENST00000550190 SNAPC4Q5SXM2 1469 aa14.88□□□□□ -0.03
CACNB3-215ENST00000550190 EEA1Q15075 1411 aa14.87□□□□□ -0.03
CACNB3-215ENST00000550190 IGF1RP08069 1367 aa14.86□□□□□ -0.03
CACNB3-215ENST00000550190 CSRNP3Q8WYN3 585 aa14.86□□□□□ -0.03
CACNB3-215ENST00000550190 FBLN2P98095 1184 aa14.85□□□□□ -0.03
CACNB3-215ENST00000550190 CUL7Q14999 1698 aa14.84□□□□□ -0.03
CACNB3-215ENST00000550190 MAGI1Q96QZ7 1491 aaPredicted RBP14.83□□□□□ -0.03
CACNB3-215ENST00000550190 ADAMTS12P58397 1594 aa14.82□□□□□ -0.04
CACNB3-215ENST00000550190 CHD1O14646 1710 aa14.81□□□□□ -0.04
CACNB3-215ENST00000550190 CHMP7Q8WUX9 453 aaPredicted RBP14.81□□□□□ -0.04
CACNB3-215ENST00000550190 EHMT2Q96KQ7 1210 aa14.81□□□□□ -0.04
CACNB3-215ENST00000550190 CARMIL1Q5VZK9 1371 aa14.81□□□□□ -0.04
CACNB3-215ENST00000550190 FHAD1B1AJZ9 1412 aa14.8□□□□□ -0.04
CACNB3-215ENST00000550190 SYNJ2O15056 1496 aa14.79□□□□□ -0.04
CACNB3-215ENST00000550190 RAPGEF2Q9Y4G8 1499 aa14.75□□□□□ -0.05
CACNB3-215ENST00000550190 PRXQ9BXM0 1461 aa14.74□□□□□ -0.05
CACNB3-215ENST00000550190 GRIN2AQ12879 1464 aa14.73□□□□□ -0.05
CACNB3-215ENST00000550190 KIF21BO75037 1637 aa14.72□□□□□ -0.05
CACNB3-215ENST00000550190 UBTFP17480 764 aaKnown RBP14.68□□□□□ -0.06
CACNB3-215ENST00000550190 GOLGA3Q08378 1498 aa14.68□□□□□ -0.06
CACNB3-215ENST00000550190 OSCARQ8IYS5 282 aa14.67□□□□□ -0.06
CACNB3-215ENST00000550190 CEP170Q5SW79 1584 aa14.67□□□□□ -0.06
CACNB3-215ENST00000550190 LOC105371045A0A1W2PR82 267 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms