RNA–Protein interactions for RNA: ENST00000550172.1

GPD1-206, Transcript of glycerol-3-phosphate dehydrogenase 1, humanhuman

TSL 3

Gene GPD1, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD1-206ENST00000550172 NISCHQ9Y2I1 1504 aa28.43■■■□□ 2.14
GPD1-206ENST00000550172 ABCC9O60706 1549 aa26.3■■□□□ 1.8
GPD1-206ENST00000550172 CCDC180Q9P1Z9 1646 aa25.78■■□□□ 1.72
GPD1-206ENST00000550172 DNAJC5BQ9UF47 199 aa25.34■■□□□ 1.65
GPD1-206ENST00000550172 RB1CC1Q8TDY2 1594 aa24.78■■□□□ 1.56
GPD1-206ENST00000550172 NACADO15069 1562 aa24.5■■□□□ 1.51
GPD1-206ENST00000550172 PABPN1Q86U42 306 aaKnown RBP eCLIP24.37■■□□□ 1.49
GPD1-206ENST00000550172 UNC13AQ9UPW8 1703 aa24.35■■□□□ 1.49
GPD1-206ENST00000550172 BICRAQ9NZM4 1560 aa24.2■■□□□ 1.47
GPD1-206ENST00000550172 DCAF8L2P0C7V8 631 aa24.06■■□□□ 1.44
GPD1-206ENST00000550172 MYO15BQ96JP2 1530 aa24.01■■□□□ 1.43
GPD1-206ENST00000550172 CC2D2AQ9P2K1 1620 aa23.78■■□□□ 1.4
GPD1-206ENST00000550172 CECR2Q9BXF3 1484 aa23.77■■□□□ 1.4
GPD1-206ENST00000550172 SHROOM4Q9ULL8 1493 aa23.74■■□□□ 1.39
GPD1-206ENST00000550172 DNAJC5Q9H3Z4 198 aa23.66■■□□□ 1.38
GPD1-206ENST00000550172 EIF4G1Q04637 1599 aaKnown RBP23.58■■□□□ 1.37
GPD1-206ENST00000550172 DCAF1Q9Y4B6 1507 aa23.48■■□□□ 1.35
GPD1-206ENST00000550172 ZCCHC6Q5VYS8 1495 aaKnown RBP23.43■■□□□ 1.34
GPD1-206ENST00000550172 SCRIBQ14160 1630 aa23.38■■□□□ 1.33
GPD1-206ENST00000550172 CUX2O14529 1486 aa22.94■■□□□ 1.26
GPD1-206ENST00000550172 ERCC6Q03468 1493 aa22.67■■□□□ 1.22
GPD1-206ENST00000550172 NCAPD3P42695 1498 aa22.66■■□□□ 1.22
GPD1-206ENST00000550172 ATAD2BQ9ULI0 1458 aa22.47■■□□□ 1.19
GPD1-206ENST00000550172 NESP48681 1621 aa22.47■■□□□ 1.19
GPD1-206ENST00000550172 HMGXB3Q12766 1538 aa22.41■■□□□ 1.18
GPD1-206ENST00000550172 THOC2Q8NI27 1593 aaKnown RBP22.4■■□□□ 1.18
GPD1-206ENST00000550172 SMARCA2P51531 1590 aa22.33■■□□□ 1.17
GPD1-206ENST00000550172 SMARCA4P51532 1647 aa22.3■■□□□ 1.16
GPD1-206ENST00000550172 TRIM41Q8WV44 630 aa22.22■■□□□ 1.15
GPD1-206ENST00000550172 LAMC3Q9Y6N6 1575 aa22.21■■□□□ 1.15
GPD1-206ENST00000550172 KIF21AQ7Z4S6 1674 aa22.17■■□□□ 1.14
GPD1-206ENST00000550172 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
GPD1-206ENST00000550172 PEG3Q9GZU2 1588 aa22.14■■□□□ 1.13
GPD1-206ENST00000550172 BAZ1AQ9NRL2 1556 aaPredicted RBP22.06■■□□□ 1.12
GPD1-206ENST00000550172 PDS5BQ9NTI5 1447 aa22.05■■□□□ 1.12
GPD1-206ENST00000550172 WDR62O43379 1518 aa21.93■■□□□ 1.1
GPD1-206ENST00000550172 MRC2Q9UBG0 1479 aa21.91■■□□□ 1.1
GPD1-206ENST00000550172 MROH2BQ7Z745 1585 aa21.9■■□□□ 1.1
GPD1-206ENST00000550172 CADPSQ9ULU8 1353 aa21.89■■□□□ 1.1
GPD1-206ENST00000550172 OSCARQ8IYS5 282 aa21.75■■□□□ 1.07
GPD1-206ENST00000550172 CEP164Q9UPV0 1460 aa21.67■■□□□ 1.06
GPD1-206ENST00000550172 FANCD2Q9BXW9 1451 aa21.62■■□□□ 1.05
GPD1-206ENST00000550172 WIZO95785 1651 aa21.6■■□□□ 1.05
GPD1-206ENST00000550172 RIMBP3CA6NJZ7 1639 aa21.6■■□□□ 1.05
GPD1-206ENST00000550172 RIMBP3BA6NNM3 1639 aa21.6■■□□□ 1.05
GPD1-206ENST00000550172 RIMBP3Q9UFD9 1639 aa21.6■■□□□ 1.05
GPD1-206ENST00000550172 CFTRP13569 1480 aa21.54■■□□□ 1.04
GPD1-206ENST00000550172 URB2Q14146 1524 aaKnown RBP21.54■■□□□ 1.04
GPD1-206ENST00000550172 ARHGEF11O15085 1522 aa21.45■■□□□ 1.02
GPD1-206ENST00000550172 ZNF608Q9ULD9 1512 aaPredicted RBP21.36■■□□□ 1.01
GPD1-206ENST00000550172 PRDM2Q13029 1718 aa21.29■■□□□ 1
GPD1-206ENST00000550172 IFT140Q96RY7 1462 aa21.29■■□□□ 1
GPD1-206ENST00000550172 CYB5RLQ6IPT4 315 aa21.27■■□□□ 1
GPD1-206ENST00000550172 TOP2AP11388 1531 aaKnown RBP21.26■□□□□ 0.99
GPD1-206ENST00000550172 ARAP1Q96P48 1450 aa21.22■□□□□ 0.99
GPD1-206ENST00000550172 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
GPD1-206ENST00000550172 EIF4G3O43432 1585 aaKnown RBP21.19■□□□□ 0.98
GPD1-206ENST00000550172 TOPBP1Q92547 1522 aa21.18■□□□□ 0.98
GPD1-206ENST00000550172 CHD1O14646 1710 aa21.17■□□□□ 0.98
GPD1-206ENST00000550172 TRHP20396 242 aaPredicted RBP21.15■□□□□ 0.98
GPD1-206ENST00000550172 TARBP1Q13395 1621 aaKnown RBP21.08■□□□□ 0.97
GPD1-206ENST00000550172 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.96
GPD1-206ENST00000550172 ABCC8Q09428 1581 aa21.05■□□□□ 0.96
GPD1-206ENST00000550172 CCDC88BA6NC98 1476 aa21.04■□□□□ 0.96
GPD1-206ENST00000550172 DNMBPQ6XZF7 1577 aa21.03■□□□□ 0.96
GPD1-206ENST00000550172 CLASP1Q7Z460 1538 aa20.94■□□□□ 0.94
GPD1-206ENST00000550172 AEBP2Q6ZN18 517 aaPredicted RBP20.94■□□□□ 0.94
GPD1-206ENST00000550172 FBLN2P98095 1184 aa20.92■□□□□ 0.94
GPD1-206ENST00000550172 POLA1P09884 1462 aaPredicted RBP20.92■□□□□ 0.94
GPD1-206ENST00000550172 RAD54L2Q9Y4B4 1467 aa20.85■□□□□ 0.93
GPD1-206ENST00000550172 TDRD9Q8NDG6 1382 aaKnown RBP20.82■□□□□ 0.92
GPD1-206ENST00000550172 SNAPC4Q5SXM2 1469 aa20.81■□□□□ 0.92
GPD1-206ENST00000550172 SYNJ1O43426 1573 aa20.78■□□□□ 0.92
GPD1-206ENST00000550172 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
GPD1-206ENST00000550172 SOGA1O94964 1423 aa20.78■□□□□ 0.92
GPD1-206ENST00000550172 MAGI1Q96QZ7 1491 aaPredicted RBP20.74■□□□□ 0.91
GPD1-206ENST00000550172 CHMP7Q8WUX9 453 aaPredicted RBP20.7■□□□□ 0.9
GPD1-206ENST00000550172 GAPVD1Q14C86 1478 aa20.69■□□□□ 0.9
GPD1-206ENST00000550172 SYNJ2O15056 1496 aa20.69■□□□□ 0.9
GPD1-206ENST00000550172 FGD5Q6ZNL6 1462 aa20.68■□□□□ 0.9
GPD1-206ENST00000550172 GRIN2BQ13224 1484 aa20.66■□□□□ 0.9
GPD1-206ENST00000550172 CUX1P39880 1505 aa20.6■□□□□ 0.89
GPD1-206ENST00000550172 PBRM1Q86U86 1689 aa20.58■□□□□ 0.89
GPD1-206ENST00000550172 ERCC6L2Q5T890 1561 aa20.57■□□□□ 0.88
GPD1-206ENST00000550172 KIF13AQ9H1H9 1805 aa20.51■□□□□ 0.87
GPD1-206ENST00000550172 ABCA5Q8WWZ7 1642 aa20.48■□□□□ 0.87
GPD1-206ENST00000550172 CEP170Q5SW79 1584 aa20.45■□□□□ 0.86
GPD1-206ENST00000550172 ABCA10Q8WWZ4 1543 aa20.43■□□□□ 0.86
GPD1-206ENST00000550172 SHROOM2Q13796 1616 aa20.42■□□□□ 0.86
GPD1-206ENST00000550172 NUP160Q12769 1436 aa20.42■□□□□ 0.86
GPD1-206ENST00000550172 GRIN2AQ12879 1464 aa20.42■□□□□ 0.86
GPD1-206ENST00000550172 ADAMTS12P58397 1594 aa20.34■□□□□ 0.85
GPD1-206ENST00000550172 KDM4FA0A1W2PPD8 638 aa20.27■□□□□ 0.84
GPD1-206ENST00000550172 ABCC10Q5T3U5 1492 aa20.25■□□□□ 0.83
GPD1-206ENST00000550172 FHAD1B1AJZ9 1412 aa20.23■□□□□ 0.83
GPD1-206ENST00000550172 ILDR1Q86SU0 546 aaPredicted RBP20.23■□□□□ 0.83
GPD1-206ENST00000550172 PRG4Q92954 1404 aaPredicted RBP20.2■□□□□ 0.82
GPD1-206ENST00000550172 DIP2BQ9P265 1576 aa20.2■□□□□ 0.82
GPD1-206ENST00000550172 MAPKBP1O60336 1514 aa20.19■□□□□ 0.82
GPD1-206ENST00000550172 FAM69CQ0P6D2 419 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms