RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 NISCHQ9Y2I1 1504 aa27.92■■■□□ 2.06
CACNB3-213ENST00000550064 CCDC180Q9P1Z9 1646 aa24.43■■□□□ 1.5
CACNB3-213ENST00000550064 ZCCHC6Q5VYS8 1495 aaKnown RBP23.4■■□□□ 1.34
CACNB3-213ENST00000550064 ABCC9O60706 1549 aa23.28■■□□□ 1.32
CACNB3-213ENST00000550064 DCAF8L2P0C7V8 631 aa23.12■■□□□ 1.29
CACNB3-213ENST00000550064 DCAF1Q9Y4B6 1507 aa23.08■■□□□ 1.28
CACNB3-213ENST00000550064 MYO15BQ96JP2 1530 aa22.87■■□□□ 1.25
CACNB3-213ENST00000550064 NACADO15069 1562 aa22.8■■□□□ 1.24
CACNB3-213ENST00000550064 RB1CC1Q8TDY2 1594 aa22.65■■□□□ 1.22
CACNB3-213ENST00000550064 SHROOM4Q9ULL8 1493 aa22.63■■□□□ 1.21
CACNB3-213ENST00000550064 SCRIBQ14160 1630 aa22.43■■□□□ 1.18
CACNB3-213ENST00000550064 UNC13AQ9UPW8 1703 aa22.21■■□□□ 1.15
CACNB3-213ENST00000550064 BICRAQ9NZM4 1560 aa21.99■■□□□ 1.11
CACNB3-213ENST00000550064 PABPN1Q86U42 306 aaKnown RBP eCLIP21.93■■□□□ 1.1
CACNB3-213ENST00000550064 CECR2Q9BXF3 1484 aa21.71■■□□□ 1.07
CACNB3-213ENST00000550064 SUPT5HO00267 1087 aaKnown RBP21.68■■□□□ 1.06
CACNB3-213ENST00000550064 RSF1Q96T23 1441 aaPredicted RBP21.59■■□□□ 1.05
CACNB3-213ENST00000550064 MROH2BQ7Z745 1585 aa21.57■■□□□ 1.04
CACNB3-213ENST00000550064 BAZ1AQ9NRL2 1556 aaPredicted RBP21.56■■□□□ 1.04
CACNB3-213ENST00000550064 SMARCA4P51532 1647 aa21.5■■□□□ 1.03
CACNB3-213ENST00000550064 WIZO95785 1651 aa21.38■■□□□ 1.01
CACNB3-213ENST00000550064 EIF4G1Q04637 1599 aaKnown RBP21.32■■□□□ 1
CACNB3-213ENST00000550064 PEG3Q9GZU2 1588 aa21.24■□□□□ 0.99
CACNB3-213ENST00000550064 ATAD2BQ9ULI0 1458 aa21.2■□□□□ 0.98
CACNB3-213ENST00000550064 SMARCA2P51531 1590 aa21.17■□□□□ 0.98
CACNB3-213ENST00000550064 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.98
CACNB3-213ENST00000550064 CC2D2AQ9P2K1 1620 aa21.07■□□□□ 0.96
CACNB3-213ENST00000550064 BAZ1BQ9UIG0 1483 aaKnown RBP21.06■□□□□ 0.96
CACNB3-213ENST00000550064 NCAPD3P42695 1498 aa21.05■□□□□ 0.96
CACNB3-213ENST00000550064 HMGXB3Q12766 1538 aa20.99■□□□□ 0.95
CACNB3-213ENST00000550064 CCDC88BA6NC98 1476 aa20.94■□□□□ 0.94
CACNB3-213ENST00000550064 DNAJC5BQ9UF47 199 aa20.73■□□□□ 0.91
CACNB3-213ENST00000550064 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
CACNB3-213ENST00000550064 CFTRP13569 1480 aa20.52■□□□□ 0.88
CACNB3-213ENST00000550064 CADPSQ9ULU8 1353 aa20.49■□□□□ 0.87
CACNB3-213ENST00000550064 ABCC8Q09428 1581 aa20.42■□□□□ 0.86
CACNB3-213ENST00000550064 PRDM2Q13029 1718 aa20.42■□□□□ 0.86
CACNB3-213ENST00000550064 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
CACNB3-213ENST00000550064 NESP48681 1621 aa20.38■□□□□ 0.85
CACNB3-213ENST00000550064 LAMC3Q9Y6N6 1575 aa20.36■□□□□ 0.85
CACNB3-213ENST00000550064 WRNQ14191 1432 aaPredicted RBP eCLIP20.31■□□□□ 0.84
CACNB3-213ENST00000550064 FANCD2Q9BXW9 1451 aa20.26■□□□□ 0.83
CACNB3-213ENST00000550064 SYNJ1O43426 1573 aa20.25■□□□□ 0.83
CACNB3-213ENST00000550064 PDS5BQ9NTI5 1447 aa20.2■□□□□ 0.82
CACNB3-213ENST00000550064 CUX1P39880 1505 aa20.17■□□□□ 0.82
CACNB3-213ENST00000550064 TOP2BQ02880 1626 aa20.17■□□□□ 0.82
CACNB3-213ENST00000550064 BIVM-ERCC5R4GMW8 1640 aa20.16■□□□□ 0.82
CACNB3-213ENST00000550064 AEBP2Q6ZN18 517 aaPredicted RBP20.16■□□□□ 0.82
CACNB3-213ENST00000550064 CEP164Q9UPV0 1460 aa20.15■□□□□ 0.82
CACNB3-213ENST00000550064 KIF21AQ7Z4S6 1674 aa20.14■□□□□ 0.81
CACNB3-213ENST00000550064 DNMBPQ6XZF7 1577 aa20.05■□□□□ 0.8
CACNB3-213ENST00000550064 URB2Q14146 1524 aaKnown RBP20.03■□□□□ 0.8
CACNB3-213ENST00000550064 FAM9AQ8IZU1 332 aaPredicted RBP20.03■□□□□ 0.8
CACNB3-213ENST00000550064 TOPBP1Q92547 1522 aa20.02■□□□□ 0.8
CACNB3-213ENST00000550064 SOGA1O94964 1423 aa20.01■□□□□ 0.79
CACNB3-213ENST00000550064 FGD5Q6ZNL6 1462 aa19.98■□□□□ 0.79
CACNB3-213ENST00000550064 MRC2Q9UBG0 1479 aa19.97■□□□□ 0.79
CACNB3-213ENST00000550064 ERCC6Q03468 1493 aa19.96■□□□□ 0.79
CACNB3-213ENST00000550064 RUSC2Q8N2Y8 1516 aa19.96■□□□□ 0.79
CACNB3-213ENST00000550064 EEA1Q15075 1411 aa19.92■□□□□ 0.78
CACNB3-213ENST00000550064 POLA1P09884 1462 aaPredicted RBP19.91■□□□□ 0.78
CACNB3-213ENST00000550064 LOC105371045A0A1W2PR82 267 aa19.87■□□□□ 0.77
CACNB3-213ENST00000550064 WDR62O43379 1518 aa19.86■□□□□ 0.77
CACNB3-213ENST00000550064 RAD54L2Q9Y4B4 1467 aa19.86■□□□□ 0.77
CACNB3-213ENST00000550064 CSRNP3Q8WYN3 585 aa19.85■□□□□ 0.77
CACNB3-213ENST00000550064 THOC2Q8NI27 1593 aaKnown RBP19.85■□□□□ 0.77
CACNB3-213ENST00000550064 KIF27Q86VH2 1401 aa19.82■□□□□ 0.76
CACNB3-213ENST00000550064 CUX2O14529 1486 aa19.81■□□□□ 0.76
CACNB3-213ENST00000550064 ABCA10Q8WWZ4 1543 aa19.79■□□□□ 0.76
CACNB3-213ENST00000550064 WDR97A6NE52 1622 aa19.76■□□□□ 0.75
CACNB3-213ENST00000550064 EHMT2Q96KQ7 1210 aa19.75■□□□□ 0.75
CACNB3-213ENST00000550064 TARBP1Q13395 1621 aaKnown RBP19.75■□□□□ 0.75
CACNB3-213ENST00000550064 IFT140Q96RY7 1462 aa19.69■□□□□ 0.74
CACNB3-213ENST00000550064 KIF21BO75037 1637 aa19.68■□□□□ 0.74
CACNB3-213ENST00000550064 IGF1RP08069 1367 aa19.68■□□□□ 0.74
CACNB3-213ENST00000550064 TDRD9Q8NDG6 1382 aaKnown RBP19.68■□□□□ 0.74
CACNB3-213ENST00000550064 ABCA5Q8WWZ7 1642 aa19.65■□□□□ 0.74
CACNB3-213ENST00000550064 GOLGA3Q08378 1498 aa19.64■□□□□ 0.73
CACNB3-213ENST00000550064 PRXQ9BXM0 1461 aa19.64■□□□□ 0.73
CACNB3-213ENST00000550064 GAPVD1Q14C86 1478 aa19.63■□□□□ 0.73
CACNB3-213ENST00000550064 RAPGEF2Q9Y4G8 1499 aa19.6■□□□□ 0.73
CACNB3-213ENST00000550064 ZNF608Q9ULD9 1512 aaPredicted RBP19.59■□□□□ 0.73
CACNB3-213ENST00000550064 AQRO60306 1485 aaKnown RBP eCLIP19.59■□□□□ 0.73
CACNB3-213ENST00000550064 ERICH3Q5RHP9 1530 aa19.57■□□□□ 0.72
CACNB3-213ENST00000550064 UBTFP17480 764 aaKnown RBP19.57■□□□□ 0.72
CACNB3-213ENST00000550064 CARMIL1Q5VZK9 1371 aa19.57■□□□□ 0.72
CACNB3-213ENST00000550064 TNIKQ9UKE5 1360 aa19.55■□□□□ 0.72
CACNB3-213ENST00000550064 PBRM1Q86U86 1689 aa19.53■□□□□ 0.72
CACNB3-213ENST00000550064 CUL7Q14999 1698 aa19.52■□□□□ 0.72
CACNB3-213ENST00000550064 EIF4G3O43432 1585 aaKnown RBP19.51■□□□□ 0.71
CACNB3-213ENST00000550064 GRIN2BQ13224 1484 aa19.5■□□□□ 0.71
CACNB3-213ENST00000550064 CEP162Q5TB80 1403 aa19.42■□□□□ 0.7
CACNB3-213ENST00000550064 ADAMTS12P58397 1594 aa19.41■□□□□ 0.7
CACNB3-213ENST00000550064 FHAD1B1AJZ9 1412 aa19.41■□□□□ 0.7
CACNB3-213ENST00000550064 SNAPC4Q5SXM2 1469 aa19.39■□□□□ 0.69
CACNB3-213ENST00000550064 MAGI1Q96QZ7 1491 aaPredicted RBP19.35■□□□□ 0.69
CACNB3-213ENST00000550064 CLIP1P30622 1438 aa19.32■□□□□ 0.68
CACNB3-213ENST00000550064 RANGAP1P46060 587 aaPredicted RBP19.31■□□□□ 0.68
CACNB3-213ENST00000550064 CTTNBP2Q8WZ74 1663 aa19.29■□□□□ 0.68
CACNB3-213ENST00000550064 SYNJ2O15056 1496 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms