RNA–Protein interactions for RNA: ENST00000550028.1

PAN2-215, Transcript of poly(A) specific ribonuclease subunit PAN2, humanhuman

TSL 2

Gene PAN2, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAN2-215ENST00000550028 NISCHQ9Y2I1 1504 aa28.28■■■□□ 2.12
PAN2-215ENST00000550028 CCDC180Q9P1Z9 1646 aa25.01■■□□□ 1.59
PAN2-215ENST00000550028 ABCC9O60706 1549 aa24.44■■□□□ 1.5
PAN2-215ENST00000550028 ZCCHC6Q5VYS8 1495 aaKnown RBP23.59■■□□□ 1.37
PAN2-215ENST00000550028 NACADO15069 1562 aa23.53■■□□□ 1.36
PAN2-215ENST00000550028 RB1CC1Q8TDY2 1594 aa23.51■■□□□ 1.35
PAN2-215ENST00000550028 DCAF8L2P0C7V8 631 aa23.49■■□□□ 1.35
PAN2-215ENST00000550028 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
PAN2-215ENST00000550028 DCAF1Q9Y4B6 1507 aa23.41■■□□□ 1.34
PAN2-215ENST00000550028 UNC13AQ9UPW8 1703 aa22.92■■□□□ 1.26
PAN2-215ENST00000550028 PABPN1Q86U42 306 aaKnown RBP eCLIP22.88■■□□□ 1.25
PAN2-215ENST00000550028 BICRAQ9NZM4 1560 aa22.87■■□□□ 1.25
PAN2-215ENST00000550028 SCRIBQ14160 1630 aa22.85■■□□□ 1.25
PAN2-215ENST00000550028 SHROOM4Q9ULL8 1493 aa22.62■■□□□ 1.21
PAN2-215ENST00000550028 DNAJC5BQ9UF47 199 aa22.44■■□□□ 1.18
PAN2-215ENST00000550028 EIF4G1Q04637 1599 aaKnown RBP22.22■■□□□ 1.15
PAN2-215ENST00000550028 CC2D2AQ9P2K1 1620 aa22.09■■□□□ 1.13
PAN2-215ENST00000550028 CECR2Q9BXF3 1484 aa22.05■■□□□ 1.12
PAN2-215ENST00000550028 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
PAN2-215ENST00000550028 BAZ1AQ9NRL2 1556 aaPredicted RBP21.87■■□□□ 1.09
PAN2-215ENST00000550028 MROH2BQ7Z745 1585 aa21.8■■□□□ 1.08
PAN2-215ENST00000550028 ATAD2BQ9ULI0 1458 aa21.8■■□□□ 1.08
PAN2-215ENST00000550028 NCAPD3P42695 1498 aa21.77■■□□□ 1.08
PAN2-215ENST00000550028 PEG3Q9GZU2 1588 aa21.71■■□□□ 1.07
PAN2-215ENST00000550028 SMARCA2P51531 1590 aa21.7■■□□□ 1.06
PAN2-215ENST00000550028 HMGXB3Q12766 1538 aa21.64■■□□□ 1.05
PAN2-215ENST00000550028 RSF1Q96T23 1441 aaPredicted RBP21.61■■□□□ 1.05
PAN2-215ENST00000550028 BAZ1BQ9UIG0 1483 aaKnown RBP21.57■■□□□ 1.04
PAN2-215ENST00000550028 WIZO95785 1651 aa21.51■■□□□ 1.03
PAN2-215ENST00000550028 TOP2AP11388 1531 aaKnown RBP21.32■■□□□ 1
PAN2-215ENST00000550028 NESP48681 1621 aa21.2■□□□□ 0.98
PAN2-215ENST00000550028 CADPSQ9ULU8 1353 aa21.13■□□□□ 0.97
PAN2-215ENST00000550028 LAMC3Q9Y6N6 1575 aa21.11■□□□□ 0.97
PAN2-215ENST00000550028 CCDC88BA6NC98 1476 aa21.09■□□□□ 0.97
PAN2-215ENST00000550028 SUPT5HO00267 1087 aaKnown RBP21.04■□□□□ 0.96
PAN2-215ENST00000550028 CFTRP13569 1480 aa21.03■□□□□ 0.96
PAN2-215ENST00000550028 ERCC6Q03468 1493 aa21.01■□□□□ 0.95
PAN2-215ENST00000550028 PDS5BQ9NTI5 1447 aa20.99■□□□□ 0.95
PAN2-215ENST00000550028 FANCD2Q9BXW9 1451 aa20.87■□□□□ 0.93
PAN2-215ENST00000550028 KIF21AQ7Z4S6 1674 aa20.86■□□□□ 0.93
PAN2-215ENST00000550028 THOC2Q8NI27 1593 aaKnown RBP20.84■□□□□ 0.93
PAN2-215ENST00000550028 CUX2O14529 1486 aa20.81■□□□□ 0.92
PAN2-215ENST00000550028 CEP164Q9UPV0 1460 aa20.8■□□□□ 0.92
PAN2-215ENST00000550028 MRC2Q9UBG0 1479 aa20.78■□□□□ 0.92
PAN2-215ENST00000550028 PRDM2Q13029 1718 aa20.72■□□□□ 0.91
PAN2-215ENST00000550028 WDR62O43379 1518 aa20.72■□□□□ 0.91
PAN2-215ENST00000550028 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
PAN2-215ENST00000550028 TOPBP1Q92547 1522 aa20.55■□□□□ 0.88
PAN2-215ENST00000550028 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
PAN2-215ENST00000550028 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
PAN2-215ENST00000550028 CUX1P39880 1505 aa20.44■□□□□ 0.86
PAN2-215ENST00000550028 POLA1P09884 1462 aaPredicted RBP20.39■□□□□ 0.85
PAN2-215ENST00000550028 IFT140Q96RY7 1462 aa20.39■□□□□ 0.85
PAN2-215ENST00000550028 FGD5Q6ZNL6 1462 aa20.34■□□□□ 0.85
PAN2-215ENST00000550028 WRNQ14191 1432 aaPredicted RBP eCLIP20.33■□□□□ 0.84
PAN2-215ENST00000550028 ZNF608Q9ULD9 1512 aaPredicted RBP20.32■□□□□ 0.84
PAN2-215ENST00000550028 TARBP1Q13395 1621 aaKnown RBP20.31■□□□□ 0.84
PAN2-215ENST00000550028 RAD54L2Q9Y4B4 1467 aa20.3■□□□□ 0.84
PAN2-215ENST00000550028 SOGA1O94964 1423 aa20.29■□□□□ 0.84
PAN2-215ENST00000550028 SYNJ1O43426 1573 aa20.27■□□□□ 0.84
PAN2-215ENST00000550028 TOP2BQ02880 1626 aa20.25■□□□□ 0.83
PAN2-215ENST00000550028 BIVM-ERCC5R4GMW8 1640 aa20.23■□□□□ 0.83
PAN2-215ENST00000550028 AQRO60306 1485 aaKnown RBP eCLIP20.2■□□□□ 0.82
PAN2-215ENST00000550028 TDRD9Q8NDG6 1382 aaKnown RBP20.18■□□□□ 0.82
PAN2-215ENST00000550028 EIF4G3O43432 1585 aaKnown RBP20.17■□□□□ 0.82
PAN2-215ENST00000550028 ABCA10Q8WWZ4 1543 aa20.17■□□□□ 0.82
PAN2-215ENST00000550028 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
PAN2-215ENST00000550028 DNAJC5Q9H3Z4 198 aa20.09■□□□□ 0.81
PAN2-215ENST00000550028 ABCA5Q8WWZ7 1642 aa20.05■□□□□ 0.8
PAN2-215ENST00000550028 GAPVD1Q14C86 1478 aa20.05■□□□□ 0.8
PAN2-215ENST00000550028 GRIN2BQ13224 1484 aa20.04■□□□□ 0.8
PAN2-215ENST00000550028 SNAPC4Q5SXM2 1469 aa20■□□□□ 0.79
PAN2-215ENST00000550028 MAGI1Q96QZ7 1491 aaPredicted RBP19.97■□□□□ 0.79
PAN2-215ENST00000550028 OSCARQ8IYS5 282 aa19.95■□□□□ 0.78
PAN2-215ENST00000550028 PBRM1Q86U86 1689 aa19.91■□□□□ 0.78
PAN2-215ENST00000550028 SYNJ2O15056 1496 aa19.9■□□□□ 0.78
PAN2-215ENST00000550028 ERICH3Q5RHP9 1530 aa19.9■□□□□ 0.78
PAN2-215ENST00000550028 KIF27Q86VH2 1401 aa19.88■□□□□ 0.77
PAN2-215ENST00000550028 TRIM41Q8WV44 630 aa19.87■□□□□ 0.77
PAN2-215ENST00000550028 FBLN2P98095 1184 aa19.86■□□□□ 0.77
PAN2-215ENST00000550028 IGF1RP08069 1367 aa19.85■□□□□ 0.77
PAN2-215ENST00000550028 CHMP7Q8WUX9 453 aaPredicted RBP19.85■□□□□ 0.77
PAN2-215ENST00000550028 ADAMTS12P58397 1594 aa19.85■□□□□ 0.77
PAN2-215ENST00000550028 CHD1O14646 1710 aa19.85■□□□□ 0.77
PAN2-215ENST00000550028 FHAD1B1AJZ9 1412 aa19.84■□□□□ 0.77
PAN2-215ENST00000550028 GRIN2AQ12879 1464 aa19.78■□□□□ 0.76
PAN2-215ENST00000550028 RUSC2Q8N2Y8 1516 aa19.77■□□□□ 0.76
PAN2-215ENST00000550028 CHIC1Q5VXU3 224 aa19.77■□□□□ 0.76
PAN2-215ENST00000550028 CLASP1Q7Z460 1538 aa19.75■□□□□ 0.75
PAN2-215ENST00000550028 NUP160Q12769 1436 aa19.74■□□□□ 0.75
PAN2-215ENST00000550028 CARMIL1Q5VZK9 1371 aa19.7■□□□□ 0.74
PAN2-215ENST00000550028 CEP170Q5SW79 1584 aa19.68■□□□□ 0.74
PAN2-215ENST00000550028 CUL7Q14999 1698 aa19.68■□□□□ 0.74
PAN2-215ENST00000550028 ARHGEF11O15085 1522 aa19.63■□□□□ 0.73
PAN2-215ENST00000550028 RIMBP3CA6NJZ7 1639 aa19.59■□□□□ 0.73
PAN2-215ENST00000550028 RIMBP3BA6NNM3 1639 aa19.59■□□□□ 0.73
PAN2-215ENST00000550028 RIMBP3Q9UFD9 1639 aa19.59■□□□□ 0.73
PAN2-215ENST00000550028 PRXQ9BXM0 1461 aa19.58■□□□□ 0.72
PAN2-215ENST00000550028 RAPGEF2Q9Y4G8 1499 aa19.57■□□□□ 0.72
PAN2-215ENST00000550028 EEA1Q15075 1411 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 184.5 ms