RNA–Protein interactions for RNA: ENST00000549874.1

KIRREL3-209, Transcript of kirre like nephrin family adhesion molecule 3, humanhuman

TSL 1 (best)

Gene KIRREL3, Length 1,507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIRREL3-209ENST00000549874 NISCHQ9Y2I1 1504 aa38.07■■■■□ 3.69
KIRREL3-209ENST00000549874 CCDC180Q9P1Z9 1646 aa33.52■■■□□ 2.96
KIRREL3-209ENST00000549874 ABCC9O60706 1549 aa32.22■■■□□ 2.75
KIRREL3-209ENST00000549874 ZCCHC6Q5VYS8 1495 aaKnown RBP31.85■■■□□ 2.69
KIRREL3-209ENST00000549874 DCAF8L2P0C7V8 631 aa31.64■■■□□ 2.66
KIRREL3-209ENST00000549874 DCAF1Q9Y4B6 1507 aa31.49■■■□□ 2.63
KIRREL3-209ENST00000549874 MYO15BQ96JP2 1530 aa31.36■■■□□ 2.61
KIRREL3-209ENST00000549874 NACADO15069 1562 aa31.36■■■□□ 2.61
KIRREL3-209ENST00000549874 RB1CC1Q8TDY2 1594 aa31.24■■■□□ 2.59
KIRREL3-209ENST00000549874 SCRIBQ14160 1630 aa30.71■■■□□ 2.51
KIRREL3-209ENST00000549874 UNC13AQ9UPW8 1703 aa30.59■■■□□ 2.49
KIRREL3-209ENST00000549874 SHROOM4Q9ULL8 1493 aa30.58■■■□□ 2.49
KIRREL3-209ENST00000549874 BICRAQ9NZM4 1560 aa30.29■■■□□ 2.44
KIRREL3-209ENST00000549874 PABPN1Q86U42 306 aaKnown RBP eCLIP30.26■■■□□ 2.43
KIRREL3-209ENST00000549874 CECR2Q9BXF3 1484 aa29.62■■■□□ 2.33
KIRREL3-209ENST00000549874 BAZ1AQ9NRL2 1556 aaPredicted RBP29.46■■■□□ 2.31
KIRREL3-209ENST00000549874 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
KIRREL3-209ENST00000549874 SMARCA4P51532 1647 aa29.4■■■□□ 2.3
KIRREL3-209ENST00000549874 MROH2BQ7Z745 1585 aa29.38■■■□□ 2.29
KIRREL3-209ENST00000549874 RSF1Q96T23 1441 aaPredicted RBP29.29■■■□□ 2.28
KIRREL3-209ENST00000549874 CC2D2AQ9P2K1 1620 aa29.16■■■□□ 2.26
KIRREL3-209ENST00000549874 SUPT5HO00267 1087 aaKnown RBP29.12■■■□□ 2.25
KIRREL3-209ENST00000549874 WIZO95785 1651 aa29.11■■■□□ 2.25
KIRREL3-209ENST00000549874 PEG3Q9GZU2 1588 aa29.08■■■□□ 2.25
KIRREL3-209ENST00000549874 ATAD2BQ9ULI0 1458 aa29.07■■■□□ 2.24
KIRREL3-209ENST00000549874 SMARCA2P51531 1590 aa29.06■■■□□ 2.24
KIRREL3-209ENST00000549874 DNAJC5BQ9UF47 199 aa28.98■■■□□ 2.23
KIRREL3-209ENST00000549874 NCAPD3P42695 1498 aa28.94■■■□□ 2.22
KIRREL3-209ENST00000549874 BAZ1BQ9UIG0 1483 aaKnown RBP28.88■■■□□ 2.21
KIRREL3-209ENST00000549874 HMGXB3Q12766 1538 aa28.85■■■□□ 2.21
KIRREL3-209ENST00000549874 TOP2AP11388 1531 aaKnown RBP28.8■■■□□ 2.2
KIRREL3-209ENST00000549874 CCDC88BA6NC98 1476 aa28.49■■■□□ 2.15
KIRREL3-209ENST00000549874 CADPSQ9ULU8 1353 aa28.15■■■□□ 2.1
KIRREL3-209ENST00000549874 CFTRP13569 1480 aa28.11■■■□□ 2.09
KIRREL3-209ENST00000549874 NESP48681 1621 aa28.09■■■□□ 2.09
KIRREL3-209ENST00000549874 LAMC3Q9Y6N6 1575 aa28.07■■■□□ 2.08
KIRREL3-209ENST00000549874 PRDM2Q13029 1718 aa27.96■■■□□ 2.07
KIRREL3-209ENST00000549874 PDS5BQ9NTI5 1447 aa27.87■■■□□ 2.05
KIRREL3-209ENST00000549874 FANCD2Q9BXW9 1451 aa27.83■■■□□ 2.05
KIRREL3-209ENST00000549874 KIF21AQ7Z4S6 1674 aa27.77■■■□□ 2.04
KIRREL3-209ENST00000549874 CEP164Q9UPV0 1460 aa27.72■■■□□ 2.03
KIRREL3-209ENST00000549874 ERCC6Q03468 1493 aa27.71■■■□□ 2.03
KIRREL3-209ENST00000549874 ABCC8Q09428 1581 aa27.68■■■□□ 2.02
KIRREL3-209ENST00000549874 WRNQ14191 1432 aaPredicted RBP eCLIP27.59■■■□□ 2.01
KIRREL3-209ENST00000549874 CHIC1Q5VXU3 224 aa27.55■■■□□ 2
KIRREL3-209ENST00000549874 MRC2Q9UBG0 1479 aa27.54■■■□□ 2
KIRREL3-209ENST00000549874 CUX1P39880 1505 aa27.51■■□□□ 1.99
KIRREL3-209ENST00000549874 URB2Q14146 1524 aaKnown RBP27.51■■□□□ 1.99
KIRREL3-209ENST00000549874 SYNJ1O43426 1573 aa27.49■■□□□ 1.99
KIRREL3-209ENST00000549874 DNMBPQ6XZF7 1577 aa27.48■■□□□ 1.99
KIRREL3-209ENST00000549874 THOC2Q8NI27 1593 aaKnown RBP27.47■■□□□ 1.99
KIRREL3-209ENST00000549874 TOPBP1Q92547 1522 aa27.46■■□□□ 1.99
KIRREL3-209ENST00000549874 TRIM41Q8WV44 630 aa27.45■■□□□ 1.98
KIRREL3-209ENST00000549874 TOP2BQ02880 1626 aa27.45■■□□□ 1.98
KIRREL3-209ENST00000549874 BIVM-ERCC5R4GMW8 1640 aa27.43■■□□□ 1.98
KIRREL3-209ENST00000549874 WDR62O43379 1518 aa27.42■■□□□ 1.98
KIRREL3-209ENST00000549874 FGD5Q6ZNL6 1462 aa27.32■■□□□ 1.96
KIRREL3-209ENST00000549874 POLA1P09884 1462 aaPredicted RBP27.27■■□□□ 1.96
KIRREL3-209ENST00000549874 SOGA1O94964 1423 aa27.19■■□□□ 1.94
KIRREL3-209ENST00000549874 CUX2O14529 1486 aa27.18■■□□□ 1.94
KIRREL3-209ENST00000549874 RAD54L2Q9Y4B4 1467 aa27.17■■□□□ 1.94
KIRREL3-209ENST00000549874 IFT140Q96RY7 1462 aa27.11■■□□□ 1.93
KIRREL3-209ENST00000549874 TARBP1Q13395 1621 aaKnown RBP27.11■■□□□ 1.93
KIRREL3-209ENST00000549874 ABCA10Q8WWZ4 1543 aa27.07■■□□□ 1.92
KIRREL3-209ENST00000549874 WDR97A6NE52 1622 aa27.03■■□□□ 1.92
KIRREL3-209ENST00000549874 TDRD9Q8NDG6 1382 aaKnown RBP26.97■■□□□ 1.91
KIRREL3-209ENST00000549874 ZNF608Q9ULD9 1512 aaPredicted RBP26.96■■□□□ 1.91
KIRREL3-209ENST00000549874 RUSC2Q8N2Y8 1516 aa26.95■■□□□ 1.91
KIRREL3-209ENST00000549874 KIF27Q86VH2 1401 aa26.95■■□□□ 1.91
KIRREL3-209ENST00000549874 FAM9AQ8IZU1 332 aaPredicted RBP26.91■■□□□ 1.9
KIRREL3-209ENST00000549874 AQRO60306 1485 aaKnown RBP eCLIP26.91■■□□□ 1.9
KIRREL3-209ENST00000549874 ABCA5Q8WWZ7 1642 aa26.9■■□□□ 1.9
KIRREL3-209ENST00000549874 GAPVD1Q14C86 1478 aa26.88■■□□□ 1.89
KIRREL3-209ENST00000549874 EEA1Q15075 1411 aa26.87■■□□□ 1.89
KIRREL3-209ENST00000549874 EIF4G3O43432 1585 aaKnown RBP26.87■■□□□ 1.89
KIRREL3-209ENST00000549874 PBRM1Q86U86 1689 aa26.78■■□□□ 1.88
KIRREL3-209ENST00000549874 CSRNP3Q8WYN3 585 aa26.78■■□□□ 1.88
KIRREL3-209ENST00000549874 IGF1RP08069 1367 aa26.77■■□□□ 1.88
KIRREL3-209ENST00000549874 GRIN2BQ13224 1484 aa26.77■■□□□ 1.88
KIRREL3-209ENST00000549874 ERICH3Q5RHP9 1530 aa26.75■■□□□ 1.87
KIRREL3-209ENST00000549874 SNAPC4Q5SXM2 1469 aa26.66■■□□□ 1.86
KIRREL3-209ENST00000549874 CUL7Q14999 1698 aa26.64■■□□□ 1.86
KIRREL3-209ENST00000549874 CARMIL1Q5VZK9 1371 aa26.63■■□□□ 1.85
KIRREL3-209ENST00000549874 MAGI1Q96QZ7 1491 aaPredicted RBP26.62■■□□□ 1.85
KIRREL3-209ENST00000549874 PRXQ9BXM0 1461 aa26.6■■□□□ 1.85
KIRREL3-209ENST00000549874 ADAMTS12P58397 1594 aa26.59■■□□□ 1.85
KIRREL3-209ENST00000549874 FHAD1B1AJZ9 1412 aa26.58■■□□□ 1.85
KIRREL3-209ENST00000549874 KIF21BO75037 1637 aa26.55■■□□□ 1.84
KIRREL3-209ENST00000549874 RAPGEF2Q9Y4G8 1499 aa26.54■■□□□ 1.84
KIRREL3-209ENST00000549874 EHMT2Q96KQ7 1210 aa26.54■■□□□ 1.84
KIRREL3-209ENST00000549874 SYNJ2O15056 1496 aa26.52■■□□□ 1.84
KIRREL3-209ENST00000549874 CHMP7Q8WUX9 453 aaPredicted RBP26.49■■□□□ 1.83
KIRREL3-209ENST00000549874 FBLN2P98095 1184 aa26.49■■□□□ 1.83
KIRREL3-209ENST00000549874 GOLGA3Q08378 1498 aa26.47■■□□□ 1.83
KIRREL3-209ENST00000549874 LOC105371045A0A1W2PR82 267 aa26.46■■□□□ 1.83
KIRREL3-209ENST00000549874 GRIN2AQ12879 1464 aa26.43■■□□□ 1.82
KIRREL3-209ENST00000549874 CHD1O14646 1710 aa26.42■■□□□ 1.82
KIRREL3-209ENST00000549874 UBTFP17480 764 aaKnown RBP26.39■■□□□ 1.81
KIRREL3-209ENST00000549874 CEP170Q5SW79 1584 aa26.28■■□□□ 1.8
KIRREL3-209ENST00000549874 NUP160Q12769 1436 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms