RNA–Protein interactions for RNA: ENST00000549840.1

ATP2A2-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

TSL 5

Gene ATP2A2, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-208ENST00000549840 NISCHQ9Y2I1 1504 aa19.08■□□□□ 0.64
ATP2A2-208ENST00000549840 CCDC180Q9P1Z9 1646 aa16.79■□□□□ 0.28
ATP2A2-208ENST00000549840 ABCC9O60706 1549 aa16.18■□□□□ 0.18
ATP2A2-208ENST00000549840 ZCCHC6Q5VYS8 1495 aaKnown RBP15.97■□□□□ 0.15
ATP2A2-208ENST00000549840 DCAF8L2P0C7V8 631 aa15.84■□□□□ 0.13
ATP2A2-208ENST00000549840 DCAF1Q9Y4B6 1507 aa15.79■□□□□ 0.12
ATP2A2-208ENST00000549840 MYO15BQ96JP2 1530 aa15.75■□□□□ 0.11
ATP2A2-208ENST00000549840 NACADO15069 1562 aa15.73■□□□□ 0.11
ATP2A2-208ENST00000549840 RB1CC1Q8TDY2 1594 aa15.67■□□□□ 0.1
ATP2A2-208ENST00000549840 SCRIBQ14160 1630 aa15.38■□□□□ 0.05
ATP2A2-208ENST00000549840 SHROOM4Q9ULL8 1493 aa15.29■□□□□ 0.04
ATP2A2-208ENST00000549840 UNC13AQ9UPW8 1703 aa15.27■□□□□ 0.04
ATP2A2-208ENST00000549840 BICRAQ9NZM4 1560 aa15.19■□□□□ 0.02
ATP2A2-208ENST00000549840 PABPN1Q86U42 306 aaKnown RBP eCLIP15.18■□□□□ 0.02
ATP2A2-208ENST00000549840 CECR2Q9BXF3 1484 aa14.84□□□□□ -0.03
ATP2A2-208ENST00000549840 EIF4G1Q04637 1599 aaKnown RBP14.77□□□□□ -0.04
ATP2A2-208ENST00000549840 BAZ1AQ9NRL2 1556 aaPredicted RBP14.77□□□□□ -0.05
ATP2A2-208ENST00000549840 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
ATP2A2-208ENST00000549840 MROH2BQ7Z745 1585 aa14.72□□□□□ -0.05
ATP2A2-208ENST00000549840 RSF1Q96T23 1441 aaPredicted RBP14.67□□□□□ -0.06
ATP2A2-208ENST00000549840 CC2D2AQ9P2K1 1620 aa14.63□□□□□ -0.07
ATP2A2-208ENST00000549840 ATAD2BQ9ULI0 1458 aa14.59□□□□□ -0.07
ATP2A2-208ENST00000549840 PEG3Q9GZU2 1588 aa14.58□□□□□ -0.08
ATP2A2-208ENST00000549840 SMARCA2P51531 1590 aa14.57□□□□□ -0.08
ATP2A2-208ENST00000549840 DNAJC5BQ9UF47 199 aa14.57□□□□□ -0.08
ATP2A2-208ENST00000549840 WIZO95785 1651 aa14.55□□□□□ -0.08
ATP2A2-208ENST00000549840 SUPT5HO00267 1087 aaKnown RBP14.55□□□□□ -0.08
ATP2A2-208ENST00000549840 NCAPD3P42695 1498 aa14.53□□□□□ -0.08
ATP2A2-208ENST00000549840 BAZ1BQ9UIG0 1483 aaKnown RBP14.49□□□□□ -0.09
ATP2A2-208ENST00000549840 HMGXB3Q12766 1538 aa14.48□□□□□ -0.09
ATP2A2-208ENST00000549840 TOP2AP11388 1531 aaKnown RBP14.43□□□□□ -0.1
ATP2A2-208ENST00000549840 CCDC88BA6NC98 1476 aa14.27□□□□□ -0.12
ATP2A2-208ENST00000549840 CADPSQ9ULU8 1353 aa14.13□□□□□ -0.15
ATP2A2-208ENST00000549840 CFTRP13569 1480 aa14.11□□□□□ -0.15
ATP2A2-208ENST00000549840 NESP48681 1621 aa14.09□□□□□ -0.15
ATP2A2-208ENST00000549840 LAMC3Q9Y6N6 1575 aa14.08□□□□□ -0.16
ATP2A2-208ENST00000549840 PDS5BQ9NTI5 1447 aa13.99□□□□□ -0.17
ATP2A2-208ENST00000549840 FANCD2Q9BXW9 1451 aa13.97□□□□□ -0.17
ATP2A2-208ENST00000549840 PRDM2Q13029 1718 aa13.95□□□□□ -0.18
ATP2A2-208ENST00000549840 ERCC6Q03468 1493 aa13.92□□□□□ -0.18
ATP2A2-208ENST00000549840 CEP164Q9UPV0 1460 aa13.92□□□□□ -0.18
ATP2A2-208ENST00000549840 KIF21AQ7Z4S6 1674 aa13.89□□□□□ -0.19
ATP2A2-208ENST00000549840 ABCC8Q09428 1581 aa13.84□□□□□ -0.19
ATP2A2-208ENST00000549840 MRC2Q9UBG0 1479 aa13.83□□□□□ -0.2
ATP2A2-208ENST00000549840 WRNQ14191 1432 aaPredicted RBP eCLIP13.82□□□□□ -0.2
ATP2A2-208ENST00000549840 URB2Q14146 1524 aaKnown RBP13.8□□□□□ -0.2
ATP2A2-208ENST00000549840 CUX1P39880 1505 aa13.79□□□□□ -0.2
ATP2A2-208ENST00000549840 THOC2Q8NI27 1593 aaKnown RBP13.79□□□□□ -0.2
ATP2A2-208ENST00000549840 DNMBPQ6XZF7 1577 aa13.78□□□□□ -0.2
ATP2A2-208ENST00000549840 WDR62O43379 1518 aa13.77□□□□□ -0.21
ATP2A2-208ENST00000549840 TOPBP1Q92547 1522 aa13.77□□□□□ -0.21
ATP2A2-208ENST00000549840 SYNJ1O43426 1573 aa13.76□□□□□ -0.21
ATP2A2-208ENST00000549840 CHIC1Q5VXU3 224 aa13.76□□□□□ -0.21
ATP2A2-208ENST00000549840 TOP2BQ02880 1626 aa13.74□□□□□ -0.21
ATP2A2-208ENST00000549840 BIVM-ERCC5R4GMW8 1640 aa13.72□□□□□ -0.21
ATP2A2-208ENST00000549840 TRIM41Q8WV44 630 aa13.72□□□□□ -0.21
ATP2A2-208ENST00000549840 FGD5Q6ZNL6 1462 aa13.69□□□□□ -0.22
ATP2A2-208ENST00000549840 POLA1P09884 1462 aaPredicted RBP13.68□□□□□ -0.22
ATP2A2-208ENST00000549840 CUX2O14529 1486 aa13.65□□□□□ -0.22
ATP2A2-208ENST00000549840 SOGA1O94964 1423 aa13.63□□□□□ -0.23
ATP2A2-208ENST00000549840 RAD54L2Q9Y4B4 1467 aa13.62□□□□□ -0.23
ATP2A2-208ENST00000549840 IFT140Q96RY7 1462 aa13.61□□□□□ -0.23
ATP2A2-208ENST00000549840 TARBP1Q13395 1621 aaKnown RBP13.59□□□□□ -0.23
ATP2A2-208ENST00000549840 ABCA10Q8WWZ4 1543 aa13.57□□□□□ -0.24
ATP2A2-208ENST00000549840 TDRD9Q8NDG6 1382 aaKnown RBP13.54□□□□□ -0.24
ATP2A2-208ENST00000549840 ZNF608Q9ULD9 1512 aaPredicted RBP13.54□□□□□ -0.24
ATP2A2-208ENST00000549840 WDR97A6NE52 1622 aa13.53□□□□□ -0.24
ATP2A2-208ENST00000549840 KIF27Q86VH2 1401 aa13.51□□□□□ -0.25
ATP2A2-208ENST00000549840 AQRO60306 1485 aaKnown RBP eCLIP13.49□□□□□ -0.257e-10■■■■□ 21.1
ATP2A2-208ENST00000549840 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
ATP2A2-208ENST00000549840 GAPVD1Q14C86 1478 aa13.48□□□□□ -0.25
ATP2A2-208ENST00000549840 ABCA5Q8WWZ7 1642 aa13.47□□□□□ -0.25
ATP2A2-208ENST00000549840 EIF4G3O43432 1585 aaKnown RBP13.47□□□□□ -0.25
ATP2A2-208ENST00000549840 EEA1Q15075 1411 aa13.46□□□□□ -0.26
ATP2A2-208ENST00000549840 FAM9AQ8IZU1 332 aaPredicted RBP13.44□□□□□ -0.26
ATP2A2-208ENST00000549840 GRIN2BQ13224 1484 aa13.43□□□□□ -0.26
ATP2A2-208ENST00000549840 IGF1RP08069 1367 aa13.43□□□□□ -0.26
ATP2A2-208ENST00000549840 ERICH3Q5RHP9 1530 aa13.41□□□□□ -0.26
ATP2A2-208ENST00000549840 CSRNP3Q8WYN3 585 aa13.4□□□□□ -0.26
ATP2A2-208ENST00000549840 PBRM1Q86U86 1689 aa13.38□□□□□ -0.27
ATP2A2-208ENST00000549840 SNAPC4Q5SXM2 1469 aa13.37□□□□□ -0.27
ATP2A2-208ENST00000549840 MAGI1Q96QZ7 1491 aaPredicted RBP13.36□□□□□ -0.27
ATP2A2-208ENST00000549840 CARMIL1Q5VZK9 1371 aa13.34□□□□□ -0.27
ATP2A2-208ENST00000549840 FHAD1B1AJZ9 1412 aa13.34□□□□□ -0.27
ATP2A2-208ENST00000549840 CUL7Q14999 1698 aa13.34□□□□□ -0.27
ATP2A2-208ENST00000549840 ADAMTS12P58397 1594 aa13.33□□□□□ -0.28
ATP2A2-208ENST00000549840 PRXQ9BXM0 1461 aa13.33□□□□□ -0.28
ATP2A2-208ENST00000549840 SYNJ2O15056 1496 aa13.31□□□□□ -0.28
ATP2A2-208ENST00000549840 RAPGEF2Q9Y4G8 1499 aa13.29□□□□□ -0.28
ATP2A2-208ENST00000549840 CHMP7Q8WUX9 453 aaPredicted RBP13.29□□□□□ -0.28
ATP2A2-208ENST00000549840 FBLN2P98095 1184 aa13.28□□□□□ -0.28
ATP2A2-208ENST00000549840 KIF21BO75037 1637 aa13.28□□□□□ -0.28
ATP2A2-208ENST00000549840 GRIN2AQ12879 1464 aa13.26□□□□□ -0.29
ATP2A2-208ENST00000549840 GOLGA3Q08378 1498 aa13.24□□□□□ -0.29
ATP2A2-208ENST00000549840 EHMT2Q96KQ7 1210 aa13.24□□□□□ -0.29
ATP2A2-208ENST00000549840 CHD1O14646 1710 aa13.22□□□□□ -0.29
ATP2A2-208ENST00000549840 LOC105371045A0A1W2PR82 267 aa13.2□□□□□ -0.3
ATP2A2-208ENST00000549840 UBTFP17480 764 aaKnown RBP13.19□□□□□ -0.3
ATP2A2-208ENST00000549840 NUP160Q12769 1436 aa13.19□□□□□ -0.3
ATP2A2-208ENST00000549840 CEP170Q5SW79 1584 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms