RNA–Protein interactions for RNA: ENST00000549754.1

KRT6A-204, Transcript of keratin 6A, humanhuman

TSL 2

Gene KRT6A, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6A-204ENST00000549754 NISCHQ9Y2I1 1504 aa24.62■■□□□ 1.53
KRT6A-204ENST00000549754 DNAJC5BQ9UF47 199 aa22.13■■□□□ 1.13
KRT6A-204ENST00000549754 CCDC180Q9P1Z9 1646 aa22.01■■□□□ 1.11
KRT6A-204ENST00000549754 ABCC9O60706 1549 aa21.95■■□□□ 1.1
KRT6A-204ENST00000549754 DNAJC5Q9H3Z4 198 aa21.47■■□□□ 1.03
KRT6A-204ENST00000549754 RB1CC1Q8TDY2 1594 aa20.91■□□□□ 0.94
KRT6A-204ENST00000549754 DCAF8L2P0C7V8 631 aa20.85■□□□□ 0.93
KRT6A-204ENST00000549754 NACADO15069 1562 aa20.78■□□□□ 0.92
KRT6A-204ENST00000549754 MYO15BQ96JP2 1530 aa20.49■□□□□ 0.87
KRT6A-204ENST00000549754 PABPN1Q86U42 306 aaKnown RBP eCLIP20.47■□□□□ 0.87
KRT6A-204ENST00000549754 ZCCHC6Q5VYS8 1495 aaKnown RBP20.43■□□□□ 0.86
KRT6A-204ENST00000549754 UNC13AQ9UPW8 1703 aa20.4■□□□□ 0.86
KRT6A-204ENST00000549754 DCAF1Q9Y4B6 1507 aa20.3■□□□□ 0.84
KRT6A-204ENST00000549754 BICRAQ9NZM4 1560 aa20.26■□□□□ 0.83
KRT6A-204ENST00000549754 SCRIBQ14160 1630 aa20.14■□□□□ 0.81
KRT6A-204ENST00000549754 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
KRT6A-204ENST00000549754 TRIM41Q8WV44 630 aa19.92■□□□□ 0.78
KRT6A-204ENST00000549754 CECR2Q9BXF3 1484 aa19.9■□□□□ 0.78
KRT6A-204ENST00000549754 CC2D2AQ9P2K1 1620 aa19.8■□□□□ 0.76
KRT6A-204ENST00000549754 EIF4G1Q04637 1599 aaKnown RBP19.78■□□□□ 0.76
KRT6A-204ENST00000549754 CUX2O14529 1486 aa19.48■□□□□ 0.71
KRT6A-204ENST00000549754 AEBP2Q6ZN18 517 aaPredicted RBP19.19■□□□□ 0.66
KRT6A-204ENST00000549754 SMARCA4P51532 1647 aa19.18■□□□□ 0.66
KRT6A-204ENST00000549754 NCAPD3P42695 1498 aa19.17■□□□□ 0.66
KRT6A-204ENST00000549754 ATAD2BQ9ULI0 1458 aa19.16■□□□□ 0.66
KRT6A-204ENST00000549754 SMARCA2P51531 1590 aa19.12■□□□□ 0.65
KRT6A-204ENST00000549754 BAZ1AQ9NRL2 1556 aaPredicted RBP19.11■□□□□ 0.65
KRT6A-204ENST00000549754 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
KRT6A-204ENST00000549754 ERCC6Q03468 1493 aa19.03■□□□□ 0.64
KRT6A-204ENST00000549754 BAZ1BQ9UIG0 1483 aaKnown RBP19.02■□□□□ 0.63
KRT6A-204ENST00000549754 MROH2BQ7Z745 1585 aa18.99■□□□□ 0.63
KRT6A-204ENST00000549754 PEG3Q9GZU2 1588 aa18.94■□□□□ 0.62
KRT6A-204ENST00000549754 NESP48681 1621 aa18.88■□□□□ 0.61
KRT6A-204ENST00000549754 WIZO95785 1651 aa18.78■□□□□ 0.6
KRT6A-204ENST00000549754 LAMC3Q9Y6N6 1575 aa18.73■□□□□ 0.59
KRT6A-204ENST00000549754 ILDR1Q86SU0 546 aaPredicted RBP18.72■□□□□ 0.59
KRT6A-204ENST00000549754 RSF1Q96T23 1441 aaPredicted RBP18.65■□□□□ 0.58
KRT6A-204ENST00000549754 PDS5BQ9NTI5 1447 aa18.65■□□□□ 0.58
KRT6A-204ENST00000549754 CADPSQ9ULU8 1353 aa18.63■□□□□ 0.57
KRT6A-204ENST00000549754 THOC2Q8NI27 1593 aaKnown RBP18.62■□□□□ 0.57
KRT6A-204ENST00000549754 KIF21AQ7Z4S6 1674 aa18.62■□□□□ 0.57
KRT6A-204ENST00000549754 TOP2AP11388 1531 aaKnown RBP18.54■□□□□ 0.56
KRT6A-204ENST00000549754 TRHP20396 242 aaPredicted RBP18.53■□□□□ 0.56
KRT6A-204ENST00000549754 MRC2Q9UBG0 1479 aa18.48■□□□□ 0.55
KRT6A-204ENST00000549754 OSCARQ8IYS5 282 aa18.47■□□□□ 0.55
KRT6A-204ENST00000549754 CEP164Q9UPV0 1460 aa18.45■□□□□ 0.54
KRT6A-204ENST00000549754 FANCD2Q9BXW9 1451 aa18.44■□□□□ 0.54
KRT6A-204ENST00000549754 CFTRP13569 1480 aa18.43■□□□□ 0.54
KRT6A-204ENST00000549754 WDR62O43379 1518 aa18.4■□□□□ 0.54
KRT6A-204ENST00000549754 CCDC88BA6NC98 1476 aa18.33■□□□□ 0.53
KRT6A-204ENST00000549754 RIMBP3CA6NJZ7 1639 aa18.27■□□□□ 0.51
KRT6A-204ENST00000549754 RIMBP3BA6NNM3 1639 aa18.27■□□□□ 0.51
KRT6A-204ENST00000549754 RIMBP3Q9UFD9 1639 aa18.27■□□□□ 0.51
KRT6A-204ENST00000549754 URB2Q14146 1524 aaKnown RBP18.26■□□□□ 0.51
KRT6A-204ENST00000549754 PRDM2Q13029 1718 aa18.24■□□□□ 0.51
KRT6A-204ENST00000549754 CYB5RLQ6IPT4 315 aa18.19■□□□□ 0.5
KRT6A-204ENST00000549754 TOPBP1Q92547 1522 aa18.09■□□□□ 0.49
KRT6A-204ENST00000549754 ARHGEF11O15085 1522 aa18.06■□□□□ 0.48
KRT6A-204ENST00000549754 IFT140Q96RY7 1462 aa18.05■□□□□ 0.48
KRT6A-204ENST00000549754 ABCC8Q09428 1581 aa18.04■□□□□ 0.48
KRT6A-204ENST00000549754 SUPT5HO00267 1087 aaKnown RBP18.04■□□□□ 0.48
KRT6A-204ENST00000549754 DNMBPQ6XZF7 1577 aa18.04■□□□□ 0.48
KRT6A-204ENST00000549754 ZNF608Q9ULD9 1512 aaPredicted RBP18.03■□□□□ 0.48
KRT6A-204ENST00000549754 EIF4G3O43432 1585 aaKnown RBP17.93■□□□□ 0.46
KRT6A-204ENST00000549754 POLA1P09884 1462 aaPredicted RBP17.92■□□□□ 0.46
KRT6A-204ENST00000549754 AQRO60306 1485 aaKnown RBP eCLIP17.89■□□□□ 0.45
KRT6A-204ENST00000549754 TARBP1Q13395 1621 aaKnown RBP17.89■□□□□ 0.45
KRT6A-204ENST00000549754 RAD54L2Q9Y4B4 1467 aa17.88■□□□□ 0.45
KRT6A-204ENST00000549754 SOGA1O94964 1423 aa17.85■□□□□ 0.45
KRT6A-204ENST00000549754 CUX1P39880 1505 aa17.84■□□□□ 0.45
KRT6A-204ENST00000549754 FGD5Q6ZNL6 1462 aa17.84■□□□□ 0.45
KRT6A-204ENST00000549754 TDRD9Q8NDG6 1382 aaKnown RBP17.81■□□□□ 0.44
KRT6A-204ENST00000549754 FBLN2P98095 1184 aa17.81■□□□□ 0.44
KRT6A-204ENST00000549754 ARAP1Q96P48 1450 aa17.79■□□□□ 0.44
KRT6A-204ENST00000549754 CHD1O14646 1710 aa17.76■□□□□ 0.43
KRT6A-204ENST00000549754 SNAPC4Q5SXM2 1469 aa17.72■□□□□ 0.43
KRT6A-204ENST00000549754 WDR97A6NE52 1622 aa17.7■□□□□ 0.42
KRT6A-204ENST00000549754 GRIN2BQ13224 1484 aa17.68■□□□□ 0.42
KRT6A-204ENST00000549754 CHMP7Q8WUX9 453 aaPredicted RBP17.66■□□□□ 0.42
KRT6A-204ENST00000549754 MAGI1Q96QZ7 1491 aaPredicted RBP17.64■□□□□ 0.41
KRT6A-204ENST00000549754 GAPVD1Q14C86 1478 aa17.63■□□□□ 0.41
KRT6A-204ENST00000549754 ABCA10Q8WWZ4 1543 aa17.62■□□□□ 0.41
KRT6A-204ENST00000549754 WRNQ14191 1432 aaPredicted RBP eCLIP17.61■□□□□ 0.41
KRT6A-204ENST00000549754 PBRM1Q86U86 1689 aa17.61■□□□□ 0.41
KRT6A-204ENST00000549754 SYNJ2O15056 1496 aa17.59■□□□□ 0.41
KRT6A-204ENST00000549754 LMTK3Q96Q04 1460 aa17.59■□□□□ 0.41
KRT6A-204ENST00000549754 SYNJ1O43426 1573 aa17.58■□□□□ 0.41
KRT6A-204ENST00000549754 TOP2BQ02880 1626 aa17.58■□□□□ 0.4
KRT6A-204ENST00000549754 ABCA5Q8WWZ7 1642 aa17.58■□□□□ 0.4
KRT6A-204ENST00000549754 KDM4FA0A1W2PPD8 638 aa17.57■□□□□ 0.4
KRT6A-204ENST00000549754 SOCS7O14512 581 aa17.57■□□□□ 0.4
KRT6A-204ENST00000549754 BIVM-ERCC5R4GMW8 1640 aa17.57■□□□□ 0.4
KRT6A-204ENST00000549754 FBXO41Q8TF61 875 aa17.56■□□□□ 0.4
KRT6A-204ENST00000549754 CLASP1Q7Z460 1538 aa17.54■□□□□ 0.4
KRT6A-204ENST00000549754 ADAMTS12P58397 1594 aa17.45■□□□□ 0.38
KRT6A-204ENST00000549754 GRIN2AQ12879 1464 aa17.44■□□□□ 0.38
KRT6A-204ENST00000549754 ILDR2Q71H61 639 aa17.42■□□□□ 0.38
KRT6A-204ENST00000549754 FHAD1B1AJZ9 1412 aa17.41■□□□□ 0.38
KRT6A-204ENST00000549754 ERICH3Q5RHP9 1530 aa17.4■□□□□ 0.38
KRT6A-204ENST00000549754 CEP170Q5SW79 1584 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms