RNA–Protein interactions for RNA: ENST00000549629.5

DGKA-223, Transcript of diacylglycerol kinase alpha, human

TSL 4

Gene DGKA, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DGKA-223	ENST00000549629	NISCH	Q9Y2I1	1504 aa		15.48	■□□□□ 0.07
DGKA-223	ENST00000549629	AEBP2	Q6ZN18	517 aa	Predicted RBP	14	□□□□□ -0.17
DGKA-223	ENST00000549629	CCDC180	Q9P1Z9	1646 aa		13.7	□□□□□ -0.22
DGKA-223	ENST00000549629	CHIC1	Q5VXU3	224 aa		13.43	□□□□□ -0.26
DGKA-223	ENST00000549629	ZCCHC6	Q5VYS8	1495 aa	Known RBP	13.04	□□□□□ -0.32
DGKA-223	ENST00000549629	ABCC9	O60706	1549 aa		12.83	□□□□□ -0.36
DGKA-223	ENST00000549629	DCAF1	Q9Y4B6	1507 aa		12.83	□□□□□ -0.36
DGKA-223	ENST00000549629	MYO15B	Q96JP2	1530 aa		12.67	□□□□□ -0.38
DGKA-223	ENST00000549629	NACAD	O15069	1562 aa		12.64	□□□□□ -0.39
DGKA-223	ENST00000549629	DCAF8L2	P0C7V8	631 aa		12.62	□□□□□ -0.39
DGKA-223	ENST00000549629	RB1CC1	Q8TDY2	1594 aa		12.59	□□□□□ -0.39
DGKA-223	ENST00000549629	SCRIB	Q14160	1630 aa		12.54	□□□□□ -0.4
DGKA-223	ENST00000549629	SHROOM4	Q9ULL8	1493 aa		12.53	□□□□□ -0.4
DGKA-223	ENST00000549629	UNC13A	Q9UPW8	1703 aa		12.43	□□□□□ -0.42
DGKA-223	ENST00000549629	BICRA	Q9NZM4	1560 aa		12.16	□□□□□ -0.46
DGKA-223	ENST00000549629	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	12.01	□□□□□ -0.49
DGKA-223	ENST00000549629	SMARCA4	P51532	1647 aa		12	□□□□□ -0.49
DGKA-223	ENST00000549629	CECR2	Q9BXF3	1484 aa		11.97	□□□□□ -0.49
DGKA-223	ENST00000549629	SUPT5H	O00267	1087 aa	Known RBP	11.95	□□□□□ -0.5
DGKA-223	ENST00000549629	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
DGKA-223	ENST00000549629	SENP3	Q9H4L4	574 aa	Predicted RBP	11.95	□□□□□ -0.5
DGKA-223	ENST00000549629	MROH2B	Q7Z745	1585 aa		11.95	□□□□□ -0.5
DGKA-223	ENST00000549629	WIZ	O95785	1651 aa		11.92	□□□□□ -0.5
DGKA-223	ENST00000549629	RSF1	Q96T23	1441 aa	Predicted RBP	11.92	□□□□□ -0.5
DGKA-223	ENST00000549629	EIF4G1	Q04637	1599 aa	Known RBP	11.83	□□□□□ -0.52
DGKA-223	ENST00000549629	PEG3	Q9GZU2	1588 aa		11.82	□□□□□ -0.52
DGKA-223	ENST00000549629	TOP2A	P11388	1531 aa	Known RBP	11.81	□□□□□ -0.52
DGKA-223	ENST00000549629	PHF23	Q9BUL5	403 aa	Predicted RBP	11.8	□□□□□ -0.52
DGKA-223	ENST00000549629	SMARCA2	P51531	1590 aa		11.77	□□□□□ -0.53
DGKA-223	ENST00000549629	HMGXB3	Q12766	1538 aa		11.7	□□□□□ -0.54
DGKA-223	ENST00000549629	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.7	□□□□□ -0.54
DGKA-223	ENST00000549629	ATAD2B	Q9ULI0	1458 aa		11.7	□□□□□ -0.54
DGKA-223	ENST00000549629	CC2D2A	Q9P2K1	1620 aa		11.67	□□□□□ -0.54
DGKA-223	ENST00000549629	CCDC88B	A6NC98	1476 aa		11.57	□□□□□ -0.56
DGKA-223	ENST00000549629	NCAPD3	P42695	1498 aa		11.57	□□□□□ -0.56
DGKA-223	ENST00000549629	PRDM2	Q13029	1718 aa		11.55	□□□□□ -0.56
DGKA-223	ENST00000549629	ABCC8	Q09428	1581 aa		11.4	□□□□□ -0.58
DGKA-223	ENST00000549629	CFTR	P13569	1480 aa		11.32	□□□□□ -0.6
DGKA-223	ENST00000549629	LAMC3	Q9Y6N6	1575 aa		11.32	□□□□□ -0.6
DGKA-223	ENST00000549629	BIVM-ERCC5	R4GMW8	1640 aa		11.31	□□□□□ -0.6
DGKA-223	ENST00000549629	SYNJ1	O43426	1573 aa		11.31	□□□□□ -0.6
DGKA-223	ENST00000549629	WRN	Q14191	1432 aa	Predicted RBP eCLIP	11.27	□□□□□ -0.6
DGKA-223	ENST00000549629	TOP2B	Q02880	1626 aa		11.27	□□□□□ -0.61
DGKA-223	ENST00000549629	KIF21A	Q7Z4S6	1674 aa		11.26	□□□□□ -0.61
DGKA-223	ENST00000549629	CADPS	Q9ULU8	1353 aa		11.25	□□□□□ -0.61
DGKA-223	ENST00000549629	TRIM41	Q8WV44	630 aa		11.24	□□□□□ -0.61
DGKA-223	ENST00000549629	NES	P48681	1621 aa		11.23	□□□□□ -0.61
DGKA-223	ENST00000549629	FANCD2	Q9BXW9	1451 aa		11.21	□□□□□ -0.61
DGKA-223	ENST00000549629	CUX1	P39880	1505 aa		11.2	□□□□□ -0.62
DGKA-223	ENST00000549629	CEP164	Q9UPV0	1460 aa		11.19	□□□□□ -0.62
DGKA-223	ENST00000549629	DNMBP	Q6XZF7	1577 aa		11.18	□□□□□ -0.62
DGKA-223	ENST00000549629	DNAJC5B	Q9UF47	199 aa		11.13	□□□□□ -0.63
DGKA-223	ENST00000549629	PDS5B	Q9NTI5	1447 aa		11.12	□□□□□ -0.63
DGKA-223	ENST00000549629	WDR97	A6NE52	1622 aa		11.11	□□□□□ -0.63
DGKA-223	ENST00000549629	FOXD1	Q16676	465 aa		11.11	□□□□□ -0.63
DGKA-223	ENST00000549629	EEA1	Q15075	1411 aa		11.1	□□□□□ -0.63
DGKA-223	ENST00000549629	FGD5	Q6ZNL6	1462 aa		11.1	□□□□□ -0.63
DGKA-223	ENST00000549629	TOPBP1	Q92547	1522 aa		11.09	□□□□□ -0.63
DGKA-223	ENST00000549629	URB2	Q14146	1524 aa	Known RBP	11.08	□□□□□ -0.64
DGKA-223	ENST00000549629	THOC2	Q8NI27	1593 aa	Known RBP	11.07	□□□□□ -0.64
DGKA-223	ENST00000549629	MRC2	Q9UBG0	1479 aa		11.06	□□□□□ -0.64
DGKA-223	ENST00000549629	SOGA1	O94964	1423 aa		11.06	□□□□□ -0.64
DGKA-223	ENST00000549629	KIF21B	O75037	1637 aa		11.06	□□□□□ -0.64
DGKA-223	ENST00000549629	ERCC6	Q03468	1493 aa		11.05	□□□□□ -0.64
DGKA-223	ENST00000549629	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.04	□□□□□ -0.64
DGKA-223	ENST00000549629	WDR62	O43379	1518 aa		11.04	□□□□□ -0.64
DGKA-223	ENST00000549629	POLA1	P09884	1462 aa	Predicted RBP	11.03	□□□□□ -0.64
DGKA-223	ENST00000549629	RUSC2	Q8N2Y8	1516 aa		11.02	□□□□□ -0.65
DGKA-223	ENST00000549629	PBRM1	Q86U86	1689 aa		11	□□□□□ -0.65
DGKA-223	ENST00000549629	ABCA5	Q8WWZ7	1642 aa		10.99	□□□□□ -0.65
DGKA-223	ENST00000549629	CUX2	O14529	1486 aa		10.99	□□□□□ -0.65
DGKA-223	ENST00000549629	KIF27	Q86VH2	1401 aa		10.98	□□□□□ -0.65
DGKA-223	ENST00000549629	GOLGA3	Q08378	1498 aa		10.98	□□□□□ -0.65
DGKA-223	ENST00000549629	ABCA10	Q8WWZ4	1543 aa		10.98	□□□□□ -0.65
DGKA-223	ENST00000549629	TARBP1	Q13395	1621 aa	Known RBP	10.97	□□□□□ -0.65
DGKA-223	ENST00000549629	CUL7	Q14999	1698 aa		10.97	□□□□□ -0.65
DGKA-223	ENST00000549629	ERICH3	Q5RHP9	1530 aa		10.96	□□□□□ -0.65
DGKA-223	ENST00000549629	RAD54L2	Q9Y4B4	1467 aa		10.95	□□□□□ -0.66
DGKA-223	ENST00000549629	EIF4G3	O43432	1585 aa	Known RBP	10.91	□□□□□ -0.66
DGKA-223	ENST00000549629	CTTNBP2	Q8WZ74	1663 aa		10.9	□□□□□ -0.66
DGKA-223	ENST00000549629	LOC105371045	A0A1W2PR82	267 aa		10.9	□□□□□ -0.66
DGKA-223	ENST00000549629	EHMT2	Q96KQ7	1210 aa		10.9	□□□□□ -0.66
DGKA-223	ENST00000549629	IFT140	Q96RY7	1462 aa		10.89	□□□□□ -0.67
DGKA-223	ENST00000549629	CSRNP3	Q8WYN3	585 aa		10.89	□□□□□ -0.67
DGKA-223	ENST00000549629	RAPGEF2	Q9Y4G8	1499 aa		10.88	□□□□□ -0.67
DGKA-223	ENST00000549629	PRX	Q9BXM0	1461 aa		10.87	□□□□□ -0.67
DGKA-223	ENST00000549629	ADAMTS12	P58397	1594 aa		10.87	□□□□□ -0.67
DGKA-223	ENST00000549629	GAPVD1	Q14C86	1478 aa		10.86	□□□□□ -0.67
DGKA-223	ENST00000549629	CEP162	Q5TB80	1403 aa		10.84	□□□□□ -0.67
DGKA-223	ENST00000549629	TNIK	Q9UKE5	1360 aa		10.83	□□□□□ -0.68
DGKA-223	ENST00000549629	ZNF608	Q9ULD9	1512 aa	Predicted RBP	10.8	□□□□□ -0.68
DGKA-223	ENST00000549629	TDRD9	Q8NDG6	1382 aa	Known RBP	10.79	□□□□□ -0.68
DGKA-223	ENST00000549629	GRIN2B	Q13224	1484 aa		10.79	□□□□□ -0.68
DGKA-223	ENST00000549629	UBTF	P17480	764 aa	Known RBP	10.78	□□□□□ -0.68
DGKA-223	ENST00000549629	PLPPR3	Q6T4P5	718 aa		10.78	□□□□□ -0.68
DGKA-223	ENST00000549629	IGF1R	P08069	1367 aa		10.77	□□□□□ -0.68
DGKA-223	ENST00000549629	CARMIL1	Q5VZK9	1371 aa		10.77	□□□□□ -0.68
DGKA-223	ENST00000549629	SNAPC4	Q5SXM2	1469 aa		10.76	□□□□□ -0.69
DGKA-223	ENST00000549629	AQR	O60306	1485 aa	Known RBP eCLIP	10.75	□□□□□ -0.69	6e-7	■■■■■ 33
DGKA-223	ENST00000549629	CLIP1	P30622	1438 aa		10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms