RNA–Protein interactions for RNA: ENST00000549592.1

EIF4B-206, Transcript of eukaryotic translation initiation factor 4B, humanhuman

TSL 2

Gene EIF4B, Length 1,901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4B-206ENST00000549592 NISCHQ9Y2I1 1504 aa25.15■■□□□ 1.62
EIF4B-206ENST00000549592 CCDC180Q9P1Z9 1646 aa21.87■■□□□ 1.09
EIF4B-206ENST00000549592 ZCCHC6Q5VYS8 1495 aaKnown RBP21.13■□□□□ 0.97
EIF4B-206ENST00000549592 ABCC9O60706 1549 aa20.85■□□□□ 0.93
EIF4B-206ENST00000549592 DCAF8L2P0C7V8 631 aa20.85■□□□□ 0.93
EIF4B-206ENST00000549592 DCAF1Q9Y4B6 1507 aa20.69■□□□□ 0.9
EIF4B-206ENST00000549592 SHROOM4Q9ULL8 1493 aa20.66■□□□□ 0.9
EIF4B-206ENST00000549592 MYO15BQ96JP2 1530 aa20.42■□□□□ 0.86
EIF4B-206ENST00000549592 NACADO15069 1562 aa20.36■□□□□ 0.85
EIF4B-206ENST00000549592 SCRIBQ14160 1630 aa20.26■□□□□ 0.83
EIF4B-206ENST00000549592 RB1CC1Q8TDY2 1594 aa20.21■□□□□ 0.83
EIF4B-206ENST00000549592 UNC13AQ9UPW8 1703 aa19.98■□□□□ 0.79
EIF4B-206ENST00000549592 SUPT5HO00267 1087 aaKnown RBP19.8■□□□□ 0.76
EIF4B-206ENST00000549592 BICRAQ9NZM4 1560 aa19.74■□□□□ 0.75
EIF4B-206ENST00000549592 PABPN1Q86U42 306 aaKnown RBP eCLIP19.7■□□□□ 0.74
EIF4B-206ENST00000549592 CECR2Q9BXF3 1484 aa19.65■□□□□ 0.74
EIF4B-206ENST00000549592 RSF1Q96T23 1441 aaPredicted RBP19.54■□□□□ 0.72
EIF4B-206ENST00000549592 MROH2BQ7Z745 1585 aa19.51■□□□□ 0.71
EIF4B-206ENST00000549592 BAZ1AQ9NRL2 1556 aaPredicted RBP19.37■□□□□ 0.69
EIF4B-206ENST00000549592 WIZO95785 1651 aa19.37■□□□□ 0.69
EIF4B-206ENST00000549592 SMARCA4P51532 1647 aa19.36■□□□□ 0.69
EIF4B-206ENST00000549592 EIF4G1Q04637 1599 aaKnown RBP19.1■□□□□ 0.65
EIF4B-206ENST00000549592 PEG3Q9GZU2 1588 aa19.07■□□□□ 0.64
EIF4B-206ENST00000549592 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
EIF4B-206ENST00000549592 ATAD2BQ9ULI0 1458 aa19.04■□□□□ 0.64
EIF4B-206ENST00000549592 SMARCA2P51531 1590 aa18.94■□□□□ 0.62
EIF4B-206ENST00000549592 CHIC1Q5VXU3 224 aa18.94■□□□□ 0.62
EIF4B-206ENST00000549592 CCDC88BA6NC98 1476 aa18.92■□□□□ 0.62
EIF4B-206ENST00000549592 BAZ1BQ9UIG0 1483 aaKnown RBP18.9■□□□□ 0.62
EIF4B-206ENST00000549592 CC2D2AQ9P2K1 1620 aa18.84■□□□□ 0.61
EIF4B-206ENST00000549592 NCAPD3P42695 1498 aa18.82■□□□□ 0.6
EIF4B-206ENST00000549592 HMGXB3Q12766 1538 aa18.79■□□□□ 0.6
EIF4B-206ENST00000549592 ABCC8Q09428 1581 aa18.59■□□□□ 0.57
EIF4B-206ENST00000549592 DNAJC5BQ9UF47 199 aa18.58■□□□□ 0.56
EIF4B-206ENST00000549592 TRIM41Q8WV44 630 aa18.52■□□□□ 0.56
EIF4B-206ENST00000549592 CFTRP13569 1480 aa18.43■□□□□ 0.54
EIF4B-206ENST00000549592 SYNJ1O43426 1573 aa18.36■□□□□ 0.53
EIF4B-206ENST00000549592 CADPSQ9ULU8 1353 aa18.35■□□□□ 0.53
EIF4B-206ENST00000549592 NESP48681 1621 aa18.35■□□□□ 0.53
EIF4B-206ENST00000549592 WRNQ14191 1432 aaPredicted RBP eCLIP18.35■□□□□ 0.53
EIF4B-206ENST00000549592 PRDM2Q13029 1718 aa18.33■□□□□ 0.52
EIF4B-206ENST00000549592 FAM9AQ8IZU1 332 aaPredicted RBP18.31■□□□□ 0.52
EIF4B-206ENST00000549592 HRCP23327 699 aa18.29■□□□□ 0.52
EIF4B-206ENST00000549592 LOC105371045A0A1W2PR82 267 aa18.27■□□□□ 0.52
EIF4B-206ENST00000549592 CUX1P39880 1505 aa18.23■□□□□ 0.51
EIF4B-206ENST00000549592 SOGA1O94964 1423 aa18.22■□□□□ 0.51
EIF4B-206ENST00000549592 TOP2BQ02880 1626 aa18.21■□□□□ 0.51
EIF4B-206ENST00000549592 RUSC2Q8N2Y8 1516 aa18.2■□□□□ 0.5
EIF4B-206ENST00000549592 BIVM-ERCC5R4GMW8 1640 aa18.19■□□□□ 0.5
EIF4B-206ENST00000549592 FANCD2Q9BXW9 1451 aa18.18■□□□□ 0.5
EIF4B-206ENST00000549592 PCGF6Q9BYE7 350 aa18.18■□□□□ 0.5
EIF4B-206ENST00000549592 LAMC3Q9Y6N6 1575 aa18.17■□□□□ 0.5
EIF4B-206ENST00000549592 EHMT2Q96KQ7 1210 aa18.15■□□□□ 0.5
EIF4B-206ENST00000549592 KIF21AQ7Z4S6 1674 aa18.09■□□□□ 0.49
EIF4B-206ENST00000549592 CEP164Q9UPV0 1460 aa18.04■□□□□ 0.48
EIF4B-206ENST00000549592 TRIM26Q12899 539 aaPredicted RBP18.02■□□□□ 0.48
EIF4B-206ENST00000549592 URB2Q14146 1524 aaKnown RBP18.01■□□□□ 0.47
EIF4B-206ENST00000549592 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
EIF4B-206ENST00000549592 PDS5BQ9NTI5 1447 aa18■□□□□ 0.47
EIF4B-206ENST00000549592 TOPBP1Q92547 1522 aa18■□□□□ 0.47
EIF4B-206ENST00000549592 DNMBPQ6XZF7 1577 aa17.99■□□□□ 0.47
EIF4B-206ENST00000549592 CSRNP3Q8WYN3 585 aa17.96■□□□□ 0.47
EIF4B-206ENST00000549592 EEA1Q15075 1411 aa17.94■□□□□ 0.46
EIF4B-206ENST00000549592 POLA1P09884 1462 aaPredicted RBP17.93■□□□□ 0.46
EIF4B-206ENST00000549592 RAD54L2Q9Y4B4 1467 aa17.92■□□□□ 0.46
EIF4B-206ENST00000549592 CUX2O14529 1486 aa17.87■□□□□ 0.45
EIF4B-206ENST00000549592 KIF27Q86VH2 1401 aa17.84■□□□□ 0.45
EIF4B-206ENST00000549592 MRC2Q9UBG0 1479 aa17.83■□□□□ 0.44
EIF4B-206ENST00000549592 KIF21BO75037 1637 aa17.82■□□□□ 0.44
EIF4B-206ENST00000549592 RAPGEF2Q9Y4G8 1499 aa17.82■□□□□ 0.44
EIF4B-206ENST00000549592 WDR97A6NE52 1622 aa17.8■□□□□ 0.44
EIF4B-206ENST00000549592 GOLGA3Q08378 1498 aa17.79■□□□□ 0.44
EIF4B-206ENST00000549592 ABCA10Q8WWZ4 1543 aa17.79■□□□□ 0.44
EIF4B-206ENST00000549592 ERCC6Q03468 1493 aa17.79■□□□□ 0.44
EIF4B-206ENST00000549592 PRXQ9BXM0 1461 aa17.77■□□□□ 0.43
EIF4B-206ENST00000549592 THOC2Q8NI27 1593 aaKnown RBP17.76■□□□□ 0.43
EIF4B-206ENST00000549592 WDR62O43379 1518 aa17.76■□□□□ 0.43
EIF4B-206ENST00000549592 TARBP1Q13395 1621 aaKnown RBP17.75■□□□□ 0.43
EIF4B-206ENST00000549592 IGF1RP08069 1367 aa17.75■□□□□ 0.43
EIF4B-206ENST00000549592 UBTFP17480 764 aaKnown RBP17.74■□□□□ 0.43
EIF4B-206ENST00000549592 TNIKQ9UKE5 1360 aa17.72■□□□□ 0.43
EIF4B-206ENST00000549592 TDRD9Q8NDG6 1382 aaKnown RBP17.72■□□□□ 0.43
EIF4B-206ENST00000549592 ZEB1P37275 1124 aaPredicted RBP17.7■□□□□ 0.42
EIF4B-206ENST00000549592 ABCA5Q8WWZ7 1642 aa17.7■□□□□ 0.42
EIF4B-206ENST00000549592 PPARGC1BQ86YN6 1023 aaKnown RBP17.69■□□□□ 0.42
EIF4B-206ENST00000549592 CEP162Q5TB80 1403 aa17.69■□□□□ 0.42
EIF4B-206ENST00000549592 ERICH3Q5RHP9 1530 aa17.68■□□□□ 0.42
EIF4B-206ENST00000549592 ZNF608Q9ULD9 1512 aaPredicted RBP17.64■□□□□ 0.41
EIF4B-206ENST00000549592 CARMIL1Q5VZK9 1371 aa17.63■□□□□ 0.41
EIF4B-206ENST00000549592 AQRO60306 1485 aaKnown RBP eCLIP17.63■□□□□ 0.413e-7■■□□□ 14.4
EIF4B-206ENST00000549592 GAPVD1Q14C86 1478 aa17.63■□□□□ 0.41
EIF4B-206ENST00000549592 RANGAP1P46060 587 aaPredicted RBP17.6■□□□□ 0.41
EIF4B-206ENST00000549592 IFT140Q96RY7 1462 aa17.58■□□□□ 0.41
EIF4B-206ENST00000549592 PBRM1Q86U86 1689 aa17.58■□□□□ 0.4
EIF4B-206ENST00000549592 CUL7Q14999 1698 aa17.55■□□□□ 0.4
EIF4B-206ENST00000549592 CLIP1P30622 1438 aa17.54■□□□□ 0.4
EIF4B-206ENST00000549592 EIF4G3O43432 1585 aaKnown RBP17.53■□□□□ 0.4
EIF4B-206ENST00000549592 ADAMTS12P58397 1594 aa17.46■□□□□ 0.39
EIF4B-206ENST00000549592 GRIN2BQ13224 1484 aa17.46■□□□□ 0.39
EIF4B-206ENST00000549592 ARAP1Q96P48 1450 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 295.2 ms