RNA–Protein interactions for RNA: ENST00000549559.2

SYT1-207, Transcript of synaptotagmin 1, humanhuman

TSL 4

Gene SYT1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-207ENST00000549559 NISCHQ9Y2I1 1504 aa29.48■■■□□ 2.31
SYT1-207ENST00000549559 AEBP2Q6ZN18 517 aaPredicted RBP29.28■■■□□ 2.28
SYT1-207ENST00000549559 CHIC1Q5VXU3 224 aa27.79■■■□□ 2.04
SYT1-207ENST00000549559 CCDC180Q9P1Z9 1646 aa26.1■■□□□ 1.77
SYT1-207ENST00000549559 ABCC9O60706 1549 aa25.18■■□□□ 1.62
SYT1-207ENST00000549559 SENP3Q9H4L4 574 aaPredicted RBP24.87■■□□□ 1.57
SYT1-207ENST00000549559 ZCCHC6Q5VYS8 1495 aaKnown RBP24.64■■□□□ 1.53
SYT1-207ENST00000549559 PHF23Q9BUL5 403 aaPredicted RBP24.61■■□□□ 1.53
SYT1-207ENST00000549559 DCAF8L2P0C7V8 631 aa24.45■■□□□ 1.5
SYT1-207ENST00000549559 NACADO15069 1562 aa24.45■■□□□ 1.5
SYT1-207ENST00000549559 DCAF1Q9Y4B6 1507 aa24.43■■□□□ 1.5
SYT1-207ENST00000549559 MYO15BQ96JP2 1530 aa24.42■■□□□ 1.5
SYT1-207ENST00000549559 RB1CC1Q8TDY2 1594 aa24.41■■□□□ 1.5
SYT1-207ENST00000549559 UNC13AQ9UPW8 1703 aa23.81■■□□□ 1.4
SYT1-207ENST00000549559 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
SYT1-207ENST00000549559 BICRAQ9NZM4 1560 aa23.61■■□□□ 1.37
SYT1-207ENST00000549559 PABPN1Q86U42 306 aaKnown RBP eCLIP23.55■■□□□ 1.36
SYT1-207ENST00000549559 SHROOM4Q9ULL8 1493 aa23.47■■□□□ 1.35
SYT1-207ENST00000549559 FOXD1Q16676 465 aa23.25■■□□□ 1.31
SYT1-207ENST00000549559 EIF4G1Q04637 1599 aaKnown RBP22.98■■□□□ 1.27
SYT1-207ENST00000549559 CECR2Q9BXF3 1484 aa22.9■■□□□ 1.26
SYT1-207ENST00000549559 BAZ1AQ9NRL2 1556 aaPredicted RBP22.84■■□□□ 1.25
SYT1-207ENST00000549559 SMARCA4P51532 1647 aa22.82■■□□□ 1.24
SYT1-207ENST00000549559 CC2D2AQ9P2K1 1620 aa22.8■■□□□ 1.24
SYT1-207ENST00000549559 DNAJC5BQ9UF47 199 aa22.75■■□□□ 1.23
SYT1-207ENST00000549559 MROH2BQ7Z745 1585 aa22.71■■□□□ 1.23
SYT1-207ENST00000549559 SMARCA2P51531 1590 aa22.62■■□□□ 1.21
SYT1-207ENST00000549559 ATAD2BQ9ULI0 1458 aa22.6■■□□□ 1.21
SYT1-207ENST00000549559 PEG3Q9GZU2 1588 aa22.59■■□□□ 1.21
SYT1-207ENST00000549559 RSF1Q96T23 1441 aaPredicted RBP22.56■■□□□ 1.2
SYT1-207ENST00000549559 NCAPD3P42695 1498 aa22.54■■□□□ 1.2
SYT1-207ENST00000549559 HMGXB3Q12766 1538 aa22.49■■□□□ 1.19
SYT1-207ENST00000549559 WIZO95785 1651 aa22.48■■□□□ 1.19
SYT1-207ENST00000549559 BAZ1BQ9UIG0 1483 aaKnown RBP22.45■■□□□ 1.18
SYT1-207ENST00000549559 TOP2AP11388 1531 aaKnown RBP22.3■■□□□ 1.16
SYT1-207ENST00000549559 SUPT5HO00267 1087 aaKnown RBP22.21■■□□□ 1.15
SYT1-207ENST00000549559 PLPPR3Q6T4P5 718 aa22.18■■□□□ 1.14
SYT1-207ENST00000549559 CCDC88BA6NC98 1476 aa22■■□□□ 1.11
SYT1-207ENST00000549559 LAMC3Q9Y6N6 1575 aa21.91■■□□□ 1.1
SYT1-207ENST00000549559 CADPSQ9ULU8 1353 aa21.89■■□□□ 1.1
SYT1-207ENST00000549559 NESP48681 1621 aa21.87■■□□□ 1.09
SYT1-207ENST00000549559 CFTRP13569 1480 aa21.83■■□□□ 1.09
SYT1-207ENST00000549559 PPP6R1Q9UPN7 881 aa21.81■■□□□ 1.08
SYT1-207ENST00000549559 PDS5BQ9NTI5 1447 aa21.76■■□□□ 1.07
SYT1-207ENST00000549559 PRDM2Q13029 1718 aa21.73■■□□□ 1.07
SYT1-207ENST00000549559 ERCC6Q03468 1493 aa21.71■■□□□ 1.07
SYT1-207ENST00000549559 ADRA2BP18089 450 aa21.71■■□□□ 1.07
SYT1-207ENST00000549559 PIAS4Q8N2W9 510 aaPredicted RBP21.68■■□□□ 1.06
SYT1-207ENST00000549559 MSH5O43196 834 aa21.66■■□□□ 1.06
SYT1-207ENST00000549559 FANCD2Q9BXW9 1451 aa21.65■■□□□ 1.06
SYT1-207ENST00000549559 KIF21AQ7Z4S6 1674 aa21.65■■□□□ 1.06
SYT1-207ENST00000549559 CEP164Q9UPV0 1460 aa21.61■■□□□ 1.05
SYT1-207ENST00000549559 THOC2Q8NI27 1593 aaKnown RBP21.51■■□□□ 1.03
SYT1-207ENST00000549559 MRC2Q9UBG0 1479 aa21.51■■□□□ 1.03
SYT1-207ENST00000549559 WDR62O43379 1518 aa21.42■■□□□ 1.02
SYT1-207ENST00000549559 URB2Q14146 1524 aaKnown RBP21.4■■□□□ 1.02
SYT1-207ENST00000549559 ABCC8Q09428 1581 aa21.38■■□□□ 1.01
SYT1-207ENST00000549559 CUX2O14529 1486 aa21.38■■□□□ 1.01
SYT1-207ENST00000549559 DNMBPQ6XZF7 1577 aa21.36■■□□□ 1.01
SYT1-207ENST00000549559 TOPBP1Q92547 1522 aa21.34■■□□□ 1.01
SYT1-207ENST00000549559 CUX1P39880 1505 aa21.29■■□□□ 1
SYT1-207ENST00000549559 WRNQ14191 1432 aaPredicted RBP eCLIP21.29■■□□□ 1
SYT1-207ENST00000549559 TOP2BQ02880 1626 aa21.21■□□□□ 0.99
SYT1-207ENST00000549559 BIVM-ERCC5R4GMW8 1640 aa21.21■□□□□ 0.99
SYT1-207ENST00000549559 SYNJ1O43426 1573 aa21.2■□□□□ 0.98
SYT1-207ENST00000549559 POLA1P09884 1462 aaPredicted RBP21.18■□□□□ 0.98
SYT1-207ENST00000549559 FGD5Q6ZNL6 1462 aa21.18■□□□□ 0.98
SYT1-207ENST00000549559 POTEDQ86YR6 584 aa21.16■□□□□ 0.98
SYT1-207ENST00000549559 IFT140Q96RY7 1462 aa21.14■□□□□ 0.98
SYT1-207ENST00000549559 SOGA1O94964 1423 aa21.09■□□□□ 0.97
SYT1-207ENST00000549559 TARBP1Q13395 1621 aaKnown RBP21.08■□□□□ 0.97
SYT1-207ENST00000549559 RAD54L2Q9Y4B4 1467 aa21.06■□□□□ 0.96
SYT1-207ENST00000549559 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
SYT1-207ENST00000549559 WDR97A6NE52 1622 aa21■□□□□ 0.95
SYT1-207ENST00000549559 ZNF608Q9ULD9 1512 aaPredicted RBP20.99■□□□□ 0.95
SYT1-207ENST00000549559 TRIM41Q8WV44 630 aa20.98■□□□□ 0.95
SYT1-207ENST00000549559 EIF4G3O43432 1585 aaKnown RBP20.95■□□□□ 0.94
SYT1-207ENST00000549559 TDRD9Q8NDG6 1382 aaKnown RBP20.91■□□□□ 0.94
SYT1-207ENST00000549559 AQRO60306 1485 aaKnown RBP eCLIP20.9■□□□□ 0.94
SYT1-207ENST00000549559 ABCA5Q8WWZ7 1642 aa20.89■□□□□ 0.94
SYT1-207ENST00000549559 GAPVD1Q14C86 1478 aa20.87■□□□□ 0.93
SYT1-207ENST00000549559 GRIN2BQ13224 1484 aa20.83■□□□□ 0.93
SYT1-207ENST00000549559 KIF27Q86VH2 1401 aa20.82■□□□□ 0.92
SYT1-207ENST00000549559 PBRM1Q86U86 1689 aa20.81■□□□□ 0.92
SYT1-207ENST00000549559 ERICH3Q5RHP9 1530 aa20.76■□□□□ 0.91
SYT1-207ENST00000549559 MAGI1Q96QZ7 1491 aaPredicted RBP20.75■□□□□ 0.91
SYT1-207ENST00000549559 SNAPC4Q5SXM2 1469 aa20.75■□□□□ 0.91
SYT1-207ENST00000549559 RUSC2Q8N2Y8 1516 aa20.68■□□□□ 0.9
SYT1-207ENST00000549559 ADAMTS12P58397 1594 aa20.68■□□□□ 0.9
SYT1-207ENST00000549559 IGF1RP08069 1367 aa20.67■□□□□ 0.9
SYT1-207ENST00000549559 EEA1Q15075 1411 aa20.67■□□□□ 0.9
SYT1-207ENST00000549559 CUL7Q14999 1698 aa20.65■□□□□ 0.9
SYT1-207ENST00000549559 SYNJ2O15056 1496 aa20.65■□□□□ 0.9
SYT1-207ENST00000549559 FHAD1B1AJZ9 1412 aa20.65■□□□□ 0.9
SYT1-207ENST00000549559 CHD1O14646 1710 aa20.61■□□□□ 0.89
SYT1-207ENST00000549559 CHMP7Q8WUX9 453 aaPredicted RBP20.6■□□□□ 0.89
SYT1-207ENST00000549559 FBLN2P98095 1184 aa20.59■□□□□ 0.89
SYT1-207ENST00000549559 CARMIL1Q5VZK9 1371 aa20.57■□□□□ 0.88
SYT1-207ENST00000549559 GRIN2AQ12879 1464 aa20.55■□□□□ 0.88
SYT1-207ENST00000549559 CSRNP3Q8WYN3 585 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms