RNA–Protein interactions for RNA: ENST00000549512.1

ZNF641-208, Transcript of zinc finger protein 641, humanhuman

TSL 3

Gene ZNF641, Length 442 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF641-208ENST00000549512 NISCHQ9Y2I1 1504 aa19.95■□□□□ 0.78
ZNF641-208ENST00000549512 CCDC180Q9P1Z9 1646 aa17.52■□□□□ 0.4
ZNF641-208ENST00000549512 ZCCHC6Q5VYS8 1495 aaKnown RBP16.73■□□□□ 0.27
ZNF641-208ENST00000549512 ABCC9O60706 1549 aa16.56■□□□□ 0.24
ZNF641-208ENST00000549512 DCAF1Q9Y4B6 1507 aa16.52■□□□□ 0.24
ZNF641-208ENST00000549512 DCAF8L2P0C7V8 631 aa16.48■□□□□ 0.23
ZNF641-208ENST00000549512 MYO15BQ96JP2 1530 aa16.36■□□□□ 0.21
ZNF641-208ENST00000549512 NACADO15069 1562 aa16.3■□□□□ 0.2
ZNF641-208ENST00000549512 RB1CC1Q8TDY2 1594 aa16.2■□□□□ 0.18
ZNF641-208ENST00000549512 SHROOM4Q9ULL8 1493 aa16.16■□□□□ 0.18
ZNF641-208ENST00000549512 SCRIBQ14160 1630 aa16.04■□□□□ 0.16
ZNF641-208ENST00000549512 UNC13AQ9UPW8 1703 aa15.91■□□□□ 0.14
ZNF641-208ENST00000549512 BICRAQ9NZM4 1560 aa15.67■□□□□ 0.1
ZNF641-208ENST00000549512 PABPN1Q86U42 306 aaKnown RBP eCLIP15.57■□□□□ 0.08
ZNF641-208ENST00000549512 SUPT5HO00267 1087 aaKnown RBP15.5■□□□□ 0.07
ZNF641-208ENST00000549512 CECR2Q9BXF3 1484 aa15.48■□□□□ 0.07
ZNF641-208ENST00000549512 BAZ1AQ9NRL2 1556 aaPredicted RBP15.44■□□□□ 0.06
ZNF641-208ENST00000549512 RSF1Q96T23 1441 aaPredicted RBP15.41■□□□□ 0.06
ZNF641-208ENST00000549512 MROH2BQ7Z745 1585 aa15.4■□□□□ 0.06
ZNF641-208ENST00000549512 SMARCA4P51532 1647 aa15.39■□□□□ 0.05
ZNF641-208ENST00000549512 WIZO95785 1651 aa15.3■□□□□ 0.04
ZNF641-208ENST00000549512 EIF4G1Q04637 1599 aaKnown RBP15.21■□□□□ 0.03
ZNF641-208ENST00000549512 PEG3Q9GZU2 1588 aa15.19■□□□□ 0.02
ZNF641-208ENST00000549512 SMARCA2P51531 1590 aa15.15■□□□□ 0.02
ZNF641-208ENST00000549512 TOP2AP11388 1531 aaKnown RBP15.14■□□□□ 0.01
ZNF641-208ENST00000549512 ATAD2BQ9ULI0 1458 aa15.12■□□□□ 0.01
ZNF641-208ENST00000549512 BAZ1BQ9UIG0 1483 aaKnown RBP15.05■□□□□ -0
ZNF641-208ENST00000549512 CC2D2AQ9P2K1 1620 aa15.03■□□□□ -0
ZNF641-208ENST00000549512 HMGXB3Q12766 1538 aa15.01□□□□□ -0.01
ZNF641-208ENST00000549512 NCAPD3P42695 1498 aa15.01□□□□□ -0.01
ZNF641-208ENST00000549512 CCDC88BA6NC98 1476 aa14.95□□□□□ -0.02
ZNF641-208ENST00000549512 CHIC1Q5VXU3 224 aa14.78□□□□□ -0.04
ZNF641-208ENST00000549512 PRDM2Q13029 1718 aa14.69□□□□□ -0.06
ZNF641-208ENST00000549512 CFTRP13569 1480 aa14.64□□□□□ -0.07
ZNF641-208ENST00000549512 DNAJC5BQ9UF47 199 aa14.64□□□□□ -0.07
ZNF641-208ENST00000549512 CADPSQ9ULU8 1353 aa14.61□□□□□ -0.07
ZNF641-208ENST00000549512 ABCC8Q09428 1581 aa14.61□□□□□ -0.07
ZNF641-208ENST00000549512 TRIM41Q8WV44 630 aa14.6□□□□□ -0.07
ZNF641-208ENST00000549512 LAMC3Q9Y6N6 1575 aa14.56□□□□□ -0.08
ZNF641-208ENST00000549512 WRNQ14191 1432 aaPredicted RBP eCLIP14.53□□□□□ -0.08
ZNF641-208ENST00000549512 NESP48681 1621 aa14.5□□□□□ -0.09
ZNF641-208ENST00000549512 SYNJ1O43426 1573 aa14.48□□□□□ -0.09
ZNF641-208ENST00000549512 FANCD2Q9BXW9 1451 aa14.46□□□□□ -0.09
ZNF641-208ENST00000549512 BIVM-ERCC5R4GMW8 1640 aa14.46□□□□□ -0.09
ZNF641-208ENST00000549512 TOP2BQ02880 1626 aa14.45□□□□□ -0.1
ZNF641-208ENST00000549512 PDS5BQ9NTI5 1447 aa14.42□□□□□ -0.1
ZNF641-208ENST00000549512 CUX1P39880 1505 aa14.41□□□□□ -0.1
ZNF641-208ENST00000549512 KIF21AQ7Z4S6 1674 aa14.4□□□□□ -0.1
ZNF641-208ENST00000549512 CEP164Q9UPV0 1460 aa14.39□□□□□ -0.11
ZNF641-208ENST00000549512 DNMBPQ6XZF7 1577 aa14.34□□□□□ -0.11
ZNF641-208ENST00000549512 FAM9AQ8IZU1 332 aaPredicted RBP14.31□□□□□ -0.12
ZNF641-208ENST00000549512 EEA1Q15075 1411 aa14.3□□□□□ -0.12
ZNF641-208ENST00000549512 TOPBP1Q92547 1522 aa14.3□□□□□ -0.12
ZNF641-208ENST00000549512 SOGA1O94964 1423 aa14.29□□□□□ -0.12
ZNF641-208ENST00000549512 URB2Q14146 1524 aaKnown RBP14.27□□□□□ -0.12
ZNF641-208ENST00000549512 FGD5Q6ZNL6 1462 aa14.27□□□□□ -0.12
ZNF641-208ENST00000549512 MRC2Q9UBG0 1479 aa14.25□□□□□ -0.13
ZNF641-208ENST00000549512 RUSC2Q8N2Y8 1516 aa14.24□□□□□ -0.13
ZNF641-208ENST00000549512 ERCC6Q03468 1493 aa14.24□□□□□ -0.13
ZNF641-208ENST00000549512 POLA1P09884 1462 aaPredicted RBP14.2□□□□□ -0.14
ZNF641-208ENST00000549512 LOC105371045A0A1W2PR82 267 aa14.2□□□□□ -0.14
ZNF641-208ENST00000549512 KIF27Q86VH2 1401 aa14.19□□□□□ -0.14
ZNF641-208ENST00000549512 CSRNP3Q8WYN3 585 aa14.19□□□□□ -0.14
ZNF641-208ENST00000549512 WDR62O43379 1518 aa14.18□□□□□ -0.14
ZNF641-208ENST00000549512 THOC2Q8NI27 1593 aaKnown RBP14.17□□□□□ -0.14
ZNF641-208ENST00000549512 WDR97A6NE52 1622 aa14.15□□□□□ -0.14
ZNF641-208ENST00000549512 CUX2O14529 1486 aa14.15□□□□□ -0.14
ZNF641-208ENST00000549512 RAD54L2Q9Y4B4 1467 aa14.15□□□□□ -0.14
ZNF641-208ENST00000549512 ABCA10Q8WWZ4 1543 aa14.15□□□□□ -0.14
ZNF641-208ENST00000549512 KIF21BO75037 1637 aa14.13□□□□□ -0.15
ZNF641-208ENST00000549512 TARBP1Q13395 1621 aaKnown RBP14.11□□□□□ -0.15
ZNF641-208ENST00000549512 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
ZNF641-208ENST00000549512 GOLGA3Q08378 1498 aa14.08□□□□□ -0.16
ZNF641-208ENST00000549512 ABCA5Q8WWZ7 1642 aa14.07□□□□□ -0.16
ZNF641-208ENST00000549512 IFT140Q96RY7 1462 aa14.06□□□□□ -0.16
ZNF641-208ENST00000549512 ERICH3Q5RHP9 1530 aa14.05□□□□□ -0.16
ZNF641-208ENST00000549512 PRXQ9BXM0 1461 aa14.04□□□□□ -0.16
ZNF641-208ENST00000549512 IGF1RP08069 1367 aa14.03□□□□□ -0.16
ZNF641-208ENST00000549512 CUL7Q14999 1698 aa14.02□□□□□ -0.16
ZNF641-208ENST00000549512 GAPVD1Q14C86 1478 aa14.02□□□□□ -0.16
ZNF641-208ENST00000549512 PBRM1Q86U86 1689 aa14.01□□□□□ -0.17
ZNF641-208ENST00000549512 RAPGEF2Q9Y4G8 1499 aa14.01□□□□□ -0.17
ZNF641-208ENST00000549512 TDRD9Q8NDG6 1382 aaKnown RBP14.01□□□□□ -0.17
ZNF641-208ENST00000549512 UBTFP17480 764 aaKnown RBP14.01□□□□□ -0.17
ZNF641-208ENST00000549512 TNIKQ9UKE5 1360 aa14□□□□□ -0.17
ZNF641-208ENST00000549512 CARMIL1Q5VZK9 1371 aa13.97□□□□□ -0.17
ZNF641-208ENST00000549512 EIF4G3O43432 1585 aaKnown RBP13.95□□□□□ -0.18
ZNF641-208ENST00000549512 ZNF608Q9ULD9 1512 aaPredicted RBP13.95□□□□□ -0.18
ZNF641-208ENST00000549512 AQRO60306 1485 aaKnown RBP eCLIP13.94□□□□□ -0.18
ZNF641-208ENST00000549512 GRIN2BQ13224 1484 aa13.93□□□□□ -0.18
ZNF641-208ENST00000549512 CEP162Q5TB80 1403 aa13.91□□□□□ -0.18
ZNF641-208ENST00000549512 ADAMTS12P58397 1594 aa13.88□□□□□ -0.19
ZNF641-208ENST00000549512 CTTNBP2Q8WZ74 1663 aa13.88□□□□□ -0.19
ZNF641-208ENST00000549512 FHAD1B1AJZ9 1412 aa13.87□□□□□ -0.19
ZNF641-208ENST00000549512 CLIP1P30622 1438 aa13.84□□□□□ -0.19
ZNF641-208ENST00000549512 SNAPC4Q5SXM2 1469 aa13.84□□□□□ -0.19
ZNF641-208ENST00000549512 MAGI1Q96QZ7 1491 aaPredicted RBP13.83□□□□□ -0.2
ZNF641-208ENST00000549512 RANGAP1P46060 587 aaPredicted RBP13.78□□□□□ -0.2
ZNF641-208ENST00000549512 SYNJ2O15056 1496 aa13.76□□□□□ -0.21
ZNF641-208ENST00000549512 GRIN2AQ12879 1464 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms