RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 NISCHQ9Y2I1 1504 aa32.88■■■□□ 2.85
CACNB3-211ENST00000549226 CCDC180Q9P1Z9 1646 aa28.91■■■□□ 2.22
CACNB3-211ENST00000549226 ZCCHC6Q5VYS8 1495 aaKnown RBP27.57■■■□□ 2
CACNB3-211ENST00000549226 ABCC9O60706 1549 aa27.51■■□□□ 1.99
CACNB3-211ENST00000549226 DCAF1Q9Y4B6 1507 aa27.34■■□□□ 1.97
CACNB3-211ENST00000549226 MYO15BQ96JP2 1530 aa27.21■■□□□ 1.95
CACNB3-211ENST00000549226 DCAF8L2P0C7V8 631 aa27.08■■□□□ 1.93
CACNB3-211ENST00000549226 NACADO15069 1562 aa27.05■■□□□ 1.92
CACNB3-211ENST00000549226 RB1CC1Q8TDY2 1594 aa26.88■■□□□ 1.89
CACNB3-211ENST00000549226 SCRIBQ14160 1630 aa26.36■■□□□ 1.81
CACNB3-211ENST00000549226 SHROOM4Q9ULL8 1493 aa26.3■■□□□ 1.8
CACNB3-211ENST00000549226 UNC13AQ9UPW8 1703 aa26.08■■□□□ 1.76
CACNB3-211ENST00000549226 BICRAQ9NZM4 1560 aa25.95■■□□□ 1.74
CACNB3-211ENST00000549226 PABPN1Q86U42 306 aaKnown RBP eCLIP25.81■■□□□ 1.72
CACNB3-211ENST00000549226 BAZ1AQ9NRL2 1556 aaPredicted RBP25.47■■□□□ 1.67
CACNB3-211ENST00000549226 CECR2Q9BXF3 1484 aa25.46■■□□□ 1.67
CACNB3-211ENST00000549226 RSF1Q96T23 1441 aaPredicted RBP25.33■■□□□ 1.65
CACNB3-211ENST00000549226 SMARCA4P51532 1647 aa25.33■■□□□ 1.65
CACNB3-211ENST00000549226 MROH2BQ7Z745 1585 aa25.3■■□□□ 1.64
CACNB3-211ENST00000549226 EIF4G1Q04637 1599 aaKnown RBP25.25■■□□□ 1.63
CACNB3-211ENST00000549226 SUPT5HO00267 1087 aaKnown RBP25.17■■□□□ 1.62
CACNB3-211ENST00000549226 PEG3Q9GZU2 1588 aa25.14■■□□□ 1.61
CACNB3-211ENST00000549226 SMARCA2P51531 1590 aa25.09■■□□□ 1.61
CACNB3-211ENST00000549226 ATAD2BQ9ULI0 1458 aa25.04■■□□□ 1.6
CACNB3-211ENST00000549226 WIZO95785 1651 aa25.01■■□□□ 1.59
CACNB3-211ENST00000549226 NCAPD3P42695 1498 aa24.96■■□□□ 1.59
CACNB3-211ENST00000549226 CC2D2AQ9P2K1 1620 aa24.92■■□□□ 1.58
CACNB3-211ENST00000549226 TOP2AP11388 1531 aaKnown RBP24.91■■□□□ 1.58
CACNB3-211ENST00000549226 HMGXB3Q12766 1538 aa24.9■■□□□ 1.58
CACNB3-211ENST00000549226 BAZ1BQ9UIG0 1483 aaKnown RBP24.89■■□□□ 1.57
CACNB3-211ENST00000549226 CCDC88BA6NC98 1476 aa24.58■■□□□ 1.52
CACNB3-211ENST00000549226 DNAJC5BQ9UF47 199 aa24.51■■□□□ 1.51
CACNB3-211ENST00000549226 CFTRP13569 1480 aa24.26■■□□□ 1.47
CACNB3-211ENST00000549226 CADPSQ9ULU8 1353 aa24.26■■□□□ 1.47
CACNB3-211ENST00000549226 LAMC3Q9Y6N6 1575 aa24.16■■□□□ 1.46
CACNB3-211ENST00000549226 PRDM2Q13029 1718 aa24.03■■□□□ 1.44
CACNB3-211ENST00000549226 PDS5BQ9NTI5 1447 aa24.01■■□□□ 1.43
CACNB3-211ENST00000549226 NESP48681 1621 aa23.99■■□□□ 1.43
CACNB3-211ENST00000549226 CHIC1Q5VXU3 224 aa23.96■■□□□ 1.43
CACNB3-211ENST00000549226 FANCD2Q9BXW9 1451 aa23.95■■□□□ 1.42
CACNB3-211ENST00000549226 WRNQ14191 1432 aaPredicted RBP eCLIP23.89■■□□□ 1.41
CACNB3-211ENST00000549226 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
CACNB3-211ENST00000549226 ABCC8Q09428 1581 aa23.82■■□□□ 1.4
CACNB3-211ENST00000549226 TRIM41Q8WV44 630 aa23.82■■□□□ 1.4
CACNB3-211ENST00000549226 ERCC6Q03468 1493 aa23.73■■□□□ 1.39
CACNB3-211ENST00000549226 TOP2BQ02880 1626 aa23.73■■□□□ 1.39
CACNB3-211ENST00000549226 SYNJ1O43426 1573 aa23.7■■□□□ 1.38
CACNB3-211ENST00000549226 CUX1P39880 1505 aa23.7■■□□□ 1.38
CACNB3-211ENST00000549226 KIF21AQ7Z4S6 1674 aa23.7■■□□□ 1.38
CACNB3-211ENST00000549226 BIVM-ERCC5R4GMW8 1640 aa23.7■■□□□ 1.38
CACNB3-211ENST00000549226 DNMBPQ6XZF7 1577 aa23.69■■□□□ 1.38
CACNB3-211ENST00000549226 MRC2Q9UBG0 1479 aa23.68■■□□□ 1.38
CACNB3-211ENST00000549226 TOPBP1Q92547 1522 aa23.64■■□□□ 1.37
CACNB3-211ENST00000549226 URB2Q14146 1524 aaKnown RBP23.62■■□□□ 1.37
CACNB3-211ENST00000549226 WDR62O43379 1518 aa23.57■■□□□ 1.36
CACNB3-211ENST00000549226 FGD5Q6ZNL6 1462 aa23.53■■□□□ 1.36
CACNB3-211ENST00000549226 THOC2Q8NI27 1593 aaKnown RBP23.52■■□□□ 1.36
CACNB3-211ENST00000549226 POLA1P09884 1462 aaPredicted RBP23.49■■□□□ 1.35
CACNB3-211ENST00000549226 EEA1Q15075 1411 aa23.48■■□□□ 1.35
CACNB3-211ENST00000549226 SOGA1O94964 1423 aa23.42■■□□□ 1.34
CACNB3-211ENST00000549226 ABCA10Q8WWZ4 1543 aa23.39■■□□□ 1.34
CACNB3-211ENST00000549226 IFT140Q96RY7 1462 aa23.37■■□□□ 1.33
CACNB3-211ENST00000549226 KIF27Q86VH2 1401 aa23.37■■□□□ 1.33
CACNB3-211ENST00000549226 CUX2O14529 1486 aa23.33■■□□□ 1.33
CACNB3-211ENST00000549226 RAD54L2Q9Y4B4 1467 aa23.32■■□□□ 1.32
CACNB3-211ENST00000549226 WDR97A6NE52 1622 aa23.29■■□□□ 1.32
CACNB3-211ENST00000549226 TARBP1Q13395 1621 aaKnown RBP23.29■■□□□ 1.32
CACNB3-211ENST00000549226 CSRNP3Q8WYN3 585 aa23.23■■□□□ 1.31
CACNB3-211ENST00000549226 RUSC2Q8N2Y8 1516 aa23.21■■□□□ 1.31
CACNB3-211ENST00000549226 FAM9AQ8IZU1 332 aaPredicted RBP23.19■■□□□ 1.3
CACNB3-211ENST00000549226 ABCA5Q8WWZ7 1642 aa23.17■■□□□ 1.3
CACNB3-211ENST00000549226 GAPVD1Q14C86 1478 aa23.17■■□□□ 1.3
CACNB3-211ENST00000549226 TDRD9Q8NDG6 1382 aaKnown RBP23.14■■□□□ 1.3
CACNB3-211ENST00000549226 IGF1RP08069 1367 aa23.14■■□□□ 1.29
CACNB3-211ENST00000549226 ERICH3Q5RHP9 1530 aa23.13■■□□□ 1.29
CACNB3-211ENST00000549226 GRIN2BQ13224 1484 aa23.09■■□□□ 1.29
CACNB3-211ENST00000549226 ZNF608Q9ULD9 1512 aaPredicted RBP23.08■■□□□ 1.29
CACNB3-211ENST00000549226 PRXQ9BXM0 1461 aa23.08■■□□□ 1.29
CACNB3-211ENST00000549226 KIF21BO75037 1637 aa23.07■■□□□ 1.28
CACNB3-211ENST00000549226 AQRO60306 1485 aaKnown RBP eCLIP23.06■■□□□ 1.28
CACNB3-211ENST00000549226 EIF4G3O43432 1585 aaKnown RBP23.05■■□□□ 1.28
CACNB3-211ENST00000549226 CUL7Q14999 1698 aa23.03■■□□□ 1.28
CACNB3-211ENST00000549226 GOLGA3Q08378 1498 aa23.03■■□□□ 1.28
CACNB3-211ENST00000549226 CARMIL1Q5VZK9 1371 aa23.02■■□□□ 1.28
CACNB3-211ENST00000549226 RAPGEF2Q9Y4G8 1499 aa22.98■■□□□ 1.27
CACNB3-211ENST00000549226 PBRM1Q86U86 1689 aa22.97■■□□□ 1.27
CACNB3-211ENST00000549226 AEBP2Q6ZN18 517 aaPredicted RBP22.97■■□□□ 1.27
CACNB3-211ENST00000549226 FHAD1B1AJZ9 1412 aa22.97■■□□□ 1.27
CACNB3-211ENST00000549226 MAGI1Q96QZ7 1491 aaPredicted RBP22.97■■□□□ 1.27
CACNB3-211ENST00000549226 ADAMTS12P58397 1594 aa22.91■■□□□ 1.26
CACNB3-211ENST00000549226 SNAPC4Q5SXM2 1469 aa22.91■■□□□ 1.26
CACNB3-211ENST00000549226 LOC105371045A0A1W2PR82 267 aa22.9■■□□□ 1.26
CACNB3-211ENST00000549226 TNIKQ9UKE5 1360 aa22.89■■□□□ 1.25
CACNB3-211ENST00000549226 SYNJ2O15056 1496 aa22.85■■□□□ 1.25
CACNB3-211ENST00000549226 UBTFP17480 764 aaKnown RBP22.84■■□□□ 1.25
CACNB3-211ENST00000549226 GRIN2AQ12879 1464 aa22.77■■□□□ 1.24
CACNB3-211ENST00000549226 CHMP7Q8WUX9 453 aaPredicted RBP22.76■■□□□ 1.23
CACNB3-211ENST00000549226 EHMT2Q96KQ7 1210 aa22.76■■□□□ 1.23
CACNB3-211ENST00000549226 CEP162Q5TB80 1403 aa22.67■■□□□ 1.22
CACNB3-211ENST00000549226 NUP160Q12769 1436 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms