RNA–Protein interactions for RNA: ENST00000549038.5

RNF41-206, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-206ENST00000549038 NISCHQ9Y2I1 1504 aa23.9■■□□□ 1.42
RNF41-206ENST00000549038 CCDC180Q9P1Z9 1646 aa20.86■□□□□ 0.93
RNF41-206ENST00000549038 ABCC9O60706 1549 aa20.18■□□□□ 0.82
RNF41-206ENST00000549038 ZCCHC6Q5VYS8 1495 aaKnown RBP20■□□□□ 0.79
RNF41-206ENST00000549038 DCAF8L2P0C7V8 631 aa19.93■□□□□ 0.78
RNF41-206ENST00000549038 DCAF1Q9Y4B6 1507 aa19.77■□□□□ 0.76
RNF41-206ENST00000549038 MYO15BQ96JP2 1530 aa19.64■□□□□ 0.73
RNF41-206ENST00000549038 NACADO15069 1562 aa19.57■□□□□ 0.72
RNF41-206ENST00000549038 DNAJC5BQ9UF47 199 aa19.48■□□□□ 0.71
RNF41-206ENST00000549038 RB1CC1Q8TDY2 1594 aa19.43■□□□□ 0.7
RNF41-206ENST00000549038 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
RNF41-206ENST00000549038 SCRIBQ14160 1630 aa19.16■□□□□ 0.66
RNF41-206ENST00000549038 PABPN1Q86U42 306 aaKnown RBP eCLIP18.9■□□□□ 0.62
RNF41-206ENST00000549038 UNC13AQ9UPW8 1703 aa18.88■□□□□ 0.61
RNF41-206ENST00000549038 BICRAQ9NZM4 1560 aa18.81■□□□□ 0.6
RNF41-206ENST00000549038 CECR2Q9BXF3 1484 aa18.58■□□□□ 0.57
RNF41-206ENST00000549038 SUPT5HO00267 1087 aaKnown RBP18.57■□□□□ 0.56
RNF41-206ENST00000549038 RSF1Q96T23 1441 aaPredicted RBP18.49■□□□□ 0.55
RNF41-206ENST00000549038 BAZ1AQ9NRL2 1556 aaPredicted RBP18.46■□□□□ 0.55
RNF41-206ENST00000549038 MROH2BQ7Z745 1585 aa18.43■□□□□ 0.54
RNF41-206ENST00000549038 SMARCA4P51532 1647 aa18.37■□□□□ 0.53
RNF41-206ENST00000549038 EIF4G1Q04637 1599 aaKnown RBP18.29■□□□□ 0.52
RNF41-206ENST00000549038 WIZO95785 1651 aa18.22■□□□□ 0.51
RNF41-206ENST00000549038 CC2D2AQ9P2K1 1620 aa18.22■□□□□ 0.51
RNF41-206ENST00000549038 ATAD2BQ9ULI0 1458 aa18.2■□□□□ 0.5
RNF41-206ENST00000549038 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
RNF41-206ENST00000549038 SMARCA2P51531 1590 aa18.16■□□□□ 0.5
RNF41-206ENST00000549038 DNAJC5Q9H3Z4 198 aa18.11■□□□□ 0.49
RNF41-206ENST00000549038 NCAPD3P42695 1498 aa18.11■□□□□ 0.49
RNF41-206ENST00000549038 TOP2AP11388 1531 aaKnown RBP18.07■□□□□ 0.48
RNF41-206ENST00000549038 BAZ1BQ9UIG0 1483 aaKnown RBP18.07■□□□□ 0.48
RNF41-206ENST00000549038 HMGXB3Q12766 1538 aa17.99■□□□□ 0.47
RNF41-206ENST00000549038 CCDC88BA6NC98 1476 aa17.93■□□□□ 0.46
RNF41-206ENST00000549038 CHIC1Q5VXU3 224 aa17.69■□□□□ 0.42
RNF41-206ENST00000549038 CADPSQ9ULU8 1353 aa17.65■□□□□ 0.42
RNF41-206ENST00000549038 CFTRP13569 1480 aa17.62■□□□□ 0.41
RNF41-206ENST00000549038 TRIM41Q8WV44 630 aa17.51■□□□□ 0.39
RNF41-206ENST00000549038 CUX2O14529 1486 aa17.48■□□□□ 0.39
RNF41-206ENST00000549038 NESP48681 1621 aa17.47■□□□□ 0.39
RNF41-206ENST00000549038 LAMC3Q9Y6N6 1575 aa17.45■□□□□ 0.38
RNF41-206ENST00000549038 WRNQ14191 1432 aaPredicted RBP eCLIP17.41■□□□□ 0.38
RNF41-206ENST00000549038 PDS5BQ9NTI5 1447 aa17.41■□□□□ 0.38
RNF41-206ENST00000549038 ABCC8Q09428 1581 aa17.4■□□□□ 0.38
RNF41-206ENST00000549038 FANCD2Q9BXW9 1451 aa17.4■□□□□ 0.38
RNF41-206ENST00000549038 ERCC6Q03468 1493 aa17.34■□□□□ 0.37
RNF41-206ENST00000549038 PRDM2Q13029 1718 aa17.33■□□□□ 0.37
RNF41-206ENST00000549038 CEP164Q9UPV0 1460 aa17.3■□□□□ 0.36
RNF41-206ENST00000549038 SYNJ1O43426 1573 aa17.25■□□□□ 0.35
RNF41-206ENST00000549038 CUX1P39880 1505 aa17.24■□□□□ 0.35
RNF41-206ENST00000549038 TOP2BQ02880 1626 aa17.22■□□□□ 0.35
RNF41-206ENST00000549038 BIVM-ERCC5R4GMW8 1640 aa17.18■□□□□ 0.34
RNF41-206ENST00000549038 THOC2Q8NI27 1593 aaKnown RBP17.18■□□□□ 0.34
RNF41-206ENST00000549038 KIF21AQ7Z4S6 1674 aa17.17■□□□□ 0.34
RNF41-206ENST00000549038 URB2Q14146 1524 aaKnown RBP17.16■□□□□ 0.34
RNF41-206ENST00000549038 TOPBP1Q92547 1522 aa17.16■□□□□ 0.34
RNF41-206ENST00000549038 DNMBPQ6XZF7 1577 aa17.16■□□□□ 0.34
RNF41-206ENST00000549038 FAM9AQ8IZU1 332 aaPredicted RBP17.15■□□□□ 0.34
RNF41-206ENST00000549038 MRC2Q9UBG0 1479 aa17.15■□□□□ 0.34
RNF41-206ENST00000549038 EEA1Q15075 1411 aa17.14■□□□□ 0.33
RNF41-206ENST00000549038 SOGA1O94964 1423 aa17.11■□□□□ 0.33
RNF41-206ENST00000549038 FGD5Q6ZNL6 1462 aa17.11■□□□□ 0.33
RNF41-206ENST00000549038 POLA1P09884 1462 aaPredicted RBP17.06■□□□□ 0.32
RNF41-206ENST00000549038 CSRNP3Q8WYN3 585 aa17.05■□□□□ 0.32
RNF41-206ENST00000549038 WDR62O43379 1518 aa17.04■□□□□ 0.32
RNF41-206ENST00000549038 RUSC2Q8N2Y8 1516 aa17.03■□□□□ 0.32
RNF41-206ENST00000549038 RAD54L2Q9Y4B4 1467 aa17.03■□□□□ 0.32
RNF41-206ENST00000549038 KIF27Q86VH2 1401 aa17.01■□□□□ 0.31
RNF41-206ENST00000549038 LOC105371045A0A1W2PR82 267 aa16.98■□□□□ 0.31
RNF41-206ENST00000549038 ABCA10Q8WWZ4 1543 aa16.97■□□□□ 0.31
RNF41-206ENST00000549038 IFT140Q96RY7 1462 aa16.93■□□□□ 0.3
RNF41-206ENST00000549038 TDRD9Q8NDG6 1382 aaKnown RBP16.91■□□□□ 0.3
RNF41-206ENST00000549038 IGF1RP08069 1367 aa16.9■□□□□ 0.3
RNF41-206ENST00000549038 EHMT2Q96KQ7 1210 aa16.88■□□□□ 0.29
RNF41-206ENST00000549038 TARBP1Q13395 1621 aaKnown RBP16.88■□□□□ 0.29
RNF41-206ENST00000549038 GOLGA3Q08378 1498 aa16.85■□□□□ 0.29
RNF41-206ENST00000549038 GAPVD1Q14C86 1478 aa16.85■□□□□ 0.29
RNF41-206ENST00000549038 AQRO60306 1485 aaKnown RBP eCLIP16.83■□□□□ 0.28
RNF41-206ENST00000549038 KIF21BO75037 1637 aa16.83■□□□□ 0.28
RNF41-206ENST00000549038 PRXQ9BXM0 1461 aa16.81■□□□□ 0.28
RNF41-206ENST00000549038 CARMIL1Q5VZK9 1371 aa16.81■□□□□ 0.28
RNF41-206ENST00000549038 WDR97A6NE52 1622 aa16.81■□□□□ 0.28
RNF41-206ENST00000549038 ZNF608Q9ULD9 1512 aaPredicted RBP16.8■□□□□ 0.28
RNF41-206ENST00000549038 UBTFP17480 764 aaKnown RBP16.8■□□□□ 0.28
RNF41-206ENST00000549038 ABCA5Q8WWZ7 1642 aa16.78■□□□□ 0.28
RNF41-206ENST00000549038 TNIKQ9UKE5 1360 aa16.77■□□□□ 0.28
RNF41-206ENST00000549038 ERICH3Q5RHP9 1530 aa16.77■□□□□ 0.28
RNF41-206ENST00000549038 GRIN2BQ13224 1484 aa16.75■□□□□ 0.27
RNF41-206ENST00000549038 RAPGEF2Q9Y4G8 1499 aa16.74■□□□□ 0.27
RNF41-206ENST00000549038 CUL7Q14999 1698 aa16.69■□□□□ 0.26
RNF41-206ENST00000549038 FHAD1B1AJZ9 1412 aa16.68■□□□□ 0.26
RNF41-206ENST00000549038 EIF4G3O43432 1585 aaKnown RBP16.67■□□□□ 0.26
RNF41-206ENST00000549038 CEP162Q5TB80 1403 aa16.63■□□□□ 0.25
RNF41-206ENST00000549038 SNAPC4Q5SXM2 1469 aa16.63■□□□□ 0.25
RNF41-206ENST00000549038 CHMP7Q8WUX9 453 aaPredicted RBP16.63■□□□□ 0.25
RNF41-206ENST00000549038 PBRM1Q86U86 1689 aa16.62■□□□□ 0.25
RNF41-206ENST00000549038 MAGI1Q96QZ7 1491 aaPredicted RBP16.62■□□□□ 0.25
RNF41-206ENST00000549038 RIMBP3CA6NJZ7 1639 aa16.61■□□□□ 0.25
RNF41-206ENST00000549038 RIMBP3BA6NNM3 1639 aa16.61■□□□□ 0.25
RNF41-206ENST00000549038 RIMBP3Q9UFD9 1639 aa16.61■□□□□ 0.25
RNF41-206ENST00000549038 FBLN2P98095 1184 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms