RNA–Protein interactions for RNA: ENST00000549030.1

PACS2-209, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 2

Gene PACS2, Length 1,925 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-209ENST00000549030 NISCHQ9Y2I1 1504 aa47.75■■■■■ 5.23
PACS2-209ENST00000549030 CCDC180Q9P1Z9 1646 aa41.87■■■■■ 4.29
PACS2-209ENST00000549030 ZCCHC6Q5VYS8 1495 aaKnown RBP40.05■■■■■ 4
PACS2-209ENST00000549030 ABCC9O60706 1549 aa39.94■■■■□ 3.98
PACS2-209ENST00000549030 DCAF8L2P0C7V8 631 aa39.52■■■■□ 3.92
PACS2-209ENST00000549030 DCAF1Q9Y4B6 1507 aa39.43■■■■□ 3.9
PACS2-209ENST00000549030 MYO15BQ96JP2 1530 aa39.1■■■■□ 3.85
PACS2-209ENST00000549030 NACADO15069 1562 aa39.02■■■■□ 3.84
PACS2-209ENST00000549030 RB1CC1Q8TDY2 1594 aa38.8■■■■□ 3.8
PACS2-209ENST00000549030 SHROOM4Q9ULL8 1493 aa38.71■■■■□ 3.79
PACS2-209ENST00000549030 SCRIBQ14160 1630 aa38.48■■■■□ 3.75
PACS2-209ENST00000549030 UNC13AQ9UPW8 1703 aa38.19■■■■□ 3.7
PACS2-209ENST00000549030 BICRAQ9NZM4 1560 aa37.72■■■■□ 3.63
PACS2-209ENST00000549030 PABPN1Q86U42 306 aaKnown RBP eCLIP37.55■■■■□ 3.6
PACS2-209ENST00000549030 CECR2Q9BXF3 1484 aa37.18■■■■□ 3.54
PACS2-209ENST00000549030 SUPT5HO00267 1087 aaKnown RBP36.98■■■■□ 3.51
PACS2-209ENST00000549030 MROH2BQ7Z745 1585 aa36.92■■■■□ 3.5
PACS2-209ENST00000549030 BAZ1AQ9NRL2 1556 aaPredicted RBP36.89■■■■□ 3.5
PACS2-209ENST00000549030 RSF1Q96T23 1441 aaPredicted RBP36.87■■■■□ 3.49
PACS2-209ENST00000549030 SMARCA4P51532 1647 aa36.83■■■■□ 3.49
PACS2-209ENST00000549030 WIZO95785 1651 aa36.64■■■■□ 3.46
PACS2-209ENST00000549030 EIF4G1Q04637 1599 aaKnown RBP36.58■■■■□ 3.45
PACS2-209ENST00000549030 PEG3Q9GZU2 1588 aa36.36■■■■□ 3.41
PACS2-209ENST00000549030 ATAD2BQ9ULI0 1458 aa36.28■■■■□ 3.4
PACS2-209ENST00000549030 SMARCA2P51531 1590 aa36.23■■■■□ 3.39
PACS2-209ENST00000549030 TOP2AP11388 1531 aaKnown RBP36.18■■■■□ 3.38
PACS2-209ENST00000549030 CC2D2AQ9P2K1 1620 aa36.16■■■■□ 3.38
PACS2-209ENST00000549030 BAZ1BQ9UIG0 1483 aaKnown RBP36.05■■■■□ 3.36
PACS2-209ENST00000549030 NCAPD3P42695 1498 aa35.99■■■■□ 3.35
PACS2-209ENST00000549030 HMGXB3Q12766 1538 aa35.96■■■■□ 3.35
PACS2-209ENST00000549030 CCDC88BA6NC98 1476 aa35.79■■■■□ 3.32
PACS2-209ENST00000549030 DNAJC5BQ9UF47 199 aa35.59■■■■□ 3.29
PACS2-209ENST00000549030 CHIC1Q5VXU3 224 aa35.18■■■■□ 3.22
PACS2-209ENST00000549030 CFTRP13569 1480 aa35.11■■■■□ 3.21
PACS2-209ENST00000549030 PRDM2Q13029 1718 aa35.04■■■■□ 3.2
PACS2-209ENST00000549030 CADPSQ9ULU8 1353 aa35.04■■■■□ 3.2
PACS2-209ENST00000549030 ABCC8Q09428 1581 aa34.99■■■■□ 3.19
PACS2-209ENST00000549030 NESP48681 1621 aa34.97■■■■□ 3.19
PACS2-209ENST00000549030 LAMC3Q9Y6N6 1575 aa34.88■■■■□ 3.17
PACS2-209ENST00000549030 TRIM41Q8WV44 630 aa34.75■■■■□ 3.15
PACS2-209ENST00000549030 WRNQ14191 1432 aaPredicted RBP eCLIP34.71■■■■□ 3.15
PACS2-209ENST00000549030 FANCD2Q9BXW9 1451 aa34.7■■■■□ 3.14
PACS2-209ENST00000549030 SYNJ1O43426 1573 aa34.67■■■■□ 3.14
PACS2-209ENST00000549030 KIF21AQ7Z4S6 1674 aa34.61■■■■□ 3.13
PACS2-209ENST00000549030 PDS5BQ9NTI5 1447 aa34.56■■■■□ 3.12
PACS2-209ENST00000549030 CUX1P39880 1505 aa34.54■■■■□ 3.12
PACS2-209ENST00000549030 TOP2BQ02880 1626 aa34.52■■■■□ 3.12
PACS2-209ENST00000549030 BIVM-ERCC5R4GMW8 1640 aa34.52■■■■□ 3.12
PACS2-209ENST00000549030 CEP164Q9UPV0 1460 aa34.51■■■■□ 3.12
PACS2-209ENST00000549030 DNMBPQ6XZF7 1577 aa34.33■■■■□ 3.09
PACS2-209ENST00000549030 URB2Q14146 1524 aaKnown RBP34.33■■■■□ 3.09
PACS2-209ENST00000549030 TOPBP1Q92547 1522 aa34.3■■■■□ 3.08
PACS2-209ENST00000549030 ERCC6Q03468 1493 aa34.24■■■■□ 3.07
PACS2-209ENST00000549030 FGD5Q6ZNL6 1462 aa34.21■■■■□ 3.07
PACS2-209ENST00000549030 MRC2Q9UBG0 1479 aa34.19■■■■□ 3.06
PACS2-209ENST00000549030 SOGA1O94964 1423 aa34.19■■■■□ 3.06
PACS2-209ENST00000549030 FAM9AQ8IZU1 332 aaPredicted RBP34.17■■■■□ 3.06
PACS2-209ENST00000549030 RUSC2Q8N2Y8 1516 aa34.13■■■■□ 3.05
PACS2-209ENST00000549030 THOC2Q8NI27 1593 aaKnown RBP34.11■■■■□ 3.05
PACS2-209ENST00000549030 POLA1P09884 1462 aaPredicted RBP34.1■■■■□ 3.05
PACS2-209ENST00000549030 WDR62O43379 1518 aa34.06■■■■□ 3.04
PACS2-209ENST00000549030 RAD54L2Q9Y4B4 1467 aa34■■■■□ 3.03
PACS2-209ENST00000549030 EEA1Q15075 1411 aa33.92■■■■□ 3.02
PACS2-209ENST00000549030 WDR97A6NE52 1622 aa33.91■■■■□ 3.02
PACS2-209ENST00000549030 CUX2O14529 1486 aa33.89■■■■□ 3.02
PACS2-209ENST00000549030 ABCA10Q8WWZ4 1543 aa33.87■■■■□ 3.01
PACS2-209ENST00000549030 TARBP1Q13395 1621 aaKnown RBP33.86■■■■□ 3.01
PACS2-209ENST00000549030 LOC105371045A0A1W2PR82 267 aa33.85■■■■□ 3.01
PACS2-209ENST00000549030 KIF27Q86VH2 1401 aa33.83■■■■□ 3.01
PACS2-209ENST00000549030 CSRNP3Q8WYN3 585 aa33.79■■■■□ 3
PACS2-209ENST00000549030 EHMT2Q96KQ7 1210 aa33.75■■■□□ 2.99
PACS2-209ENST00000549030 ABCA5Q8WWZ7 1642 aa33.69■■■□□ 2.98
PACS2-209ENST00000549030 IFT140Q96RY7 1462 aa33.68■■■□□ 2.98
PACS2-209ENST00000549030 TDRD9Q8NDG6 1382 aaKnown RBP33.67■■■□□ 2.98
PACS2-209ENST00000549030 KIF21BO75037 1637 aa33.62■■■□□ 2.97
PACS2-209ENST00000549030 ZNF608Q9ULD9 1512 aaPredicted RBP33.6■■■□□ 2.97
PACS2-209ENST00000549030 IGF1RP08069 1367 aa33.59■■■□□ 2.97
PACS2-209ENST00000549030 GAPVD1Q14C86 1478 aa33.57■■■□□ 2.97
PACS2-209ENST00000549030 AQRO60306 1485 aaKnown RBP eCLIP33.54■■■□□ 2.96
PACS2-209ENST00000549030 PRXQ9BXM0 1461 aa33.54■■■□□ 2.96
PACS2-209ENST00000549030 PBRM1Q86U86 1689 aa33.53■■■□□ 2.96
PACS2-209ENST00000549030 RAPGEF2Q9Y4G8 1499 aa33.51■■■□□ 2.95
PACS2-209ENST00000549030 GOLGA3Q08378 1498 aa33.5■■■□□ 2.95
PACS2-209ENST00000549030 EIF4G3O43432 1585 aaKnown RBP33.5■■■□□ 2.95
PACS2-209ENST00000549030 ERICH3Q5RHP9 1530 aa33.46■■■□□ 2.95
PACS2-209ENST00000549030 CUL7Q14999 1698 aa33.43■■■□□ 2.94
PACS2-209ENST00000549030 CARMIL1Q5VZK9 1371 aa33.4■■■□□ 2.94
PACS2-209ENST00000549030 GRIN2BQ13224 1484 aa33.36■■■□□ 2.93
PACS2-209ENST00000549030 UBTFP17480 764 aaKnown RBP33.34■■■□□ 2.93
PACS2-209ENST00000549030 TNIKQ9UKE5 1360 aa33.29■■■□□ 2.92
PACS2-209ENST00000549030 ADAMTS12P58397 1594 aa33.28■■■□□ 2.92
PACS2-209ENST00000549030 SNAPC4Q5SXM2 1469 aa33.24■■■□□ 2.91
PACS2-209ENST00000549030 FHAD1B1AJZ9 1412 aa33.17■■■□□ 2.9
PACS2-209ENST00000549030 CEP162Q5TB80 1403 aa33.13■■■□□ 2.89
PACS2-209ENST00000549030 MAGI1Q96QZ7 1491 aaPredicted RBP33.12■■■□□ 2.89
PACS2-209ENST00000549030 CTTNBP2Q8WZ74 1663 aa33.07■■■□□ 2.88
PACS2-209ENST00000549030 SYNJ2O15056 1496 aa33.01■■■□□ 2.87
PACS2-209ENST00000549030 RANGAP1P46060 587 aaPredicted RBP32.99■■■□□ 2.87
PACS2-209ENST00000549030 GRIN2AQ12879 1464 aa32.98■■■□□ 2.87
PACS2-209ENST00000549030 CLIP1P30622 1438 aa32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms