RNA–Protein interactions for RNA: ENST00000548980.1

NCKAP1L-206, Transcript of NCK associated protein 1 like, humanhuman

TSL 2

Gene NCKAP1L, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-206ENST00000548980 NISCHQ9Y2I1 1504 aa25.09■■□□□ 1.61
NCKAP1L-206ENST00000548980 ABCC9O60706 1549 aa23.22■■□□□ 1.31
NCKAP1L-206ENST00000548980 CCDC180Q9P1Z9 1646 aa22.76■■□□□ 1.23
NCKAP1L-206ENST00000548980 DNAJC5BQ9UF47 199 aa22.19■■□□□ 1.14
NCKAP1L-206ENST00000548980 RB1CC1Q8TDY2 1594 aa21.88■■□□□ 1.09
NCKAP1L-206ENST00000548980 NACADO15069 1562 aa21.61■■□□□ 1.05
NCKAP1L-206ENST00000548980 PABPN1Q86U42 306 aaKnown RBP eCLIP21.5■■□□□ 1.03
NCKAP1L-206ENST00000548980 UNC13AQ9UPW8 1703 aa21.41■■□□□ 1.02
NCKAP1L-206ENST00000548980 DCAF8L2P0C7V8 631 aa21.31■■□□□ 1
NCKAP1L-206ENST00000548980 BICRAQ9NZM4 1560 aa21.28■■□□□ 1
NCKAP1L-206ENST00000548980 MYO15BQ96JP2 1530 aa21.15■□□□□ 0.98
NCKAP1L-206ENST00000548980 CECR2Q9BXF3 1484 aa20.97■□□□□ 0.95
NCKAP1L-206ENST00000548980 CC2D2AQ9P2K1 1620 aa20.96■□□□□ 0.95
NCKAP1L-206ENST00000548980 SHROOM4Q9ULL8 1493 aa20.95■□□□□ 0.94
NCKAP1L-206ENST00000548980 EIF4G1Q04637 1599 aaKnown RBP20.8■□□□□ 0.92
NCKAP1L-206ENST00000548980 DNAJC5Q9H3Z4 198 aa20.72■□□□□ 0.91
NCKAP1L-206ENST00000548980 ZCCHC6Q5VYS8 1495 aaKnown RBP20.71■□□□□ 0.91
NCKAP1L-206ENST00000548980 DCAF1Q9Y4B6 1507 aa20.7■□□□□ 0.9
NCKAP1L-206ENST00000548980 SCRIBQ14160 1630 aa20.7■□□□□ 0.9
NCKAP1L-206ENST00000548980 CUX2O14529 1486 aa20.23■□□□□ 0.83
NCKAP1L-206ENST00000548980 ERCC6Q03468 1493 aa20.08■□□□□ 0.81
NCKAP1L-206ENST00000548980 NCAPD3P42695 1498 aa19.94■□□□□ 0.78
NCKAP1L-206ENST00000548980 ATAD2BQ9ULI0 1458 aa19.83■□□□□ 0.76
NCKAP1L-206ENST00000548980 NESP48681 1621 aa19.8■□□□□ 0.76
NCKAP1L-206ENST00000548980 HMGXB3Q12766 1538 aa19.79■□□□□ 0.76
NCKAP1L-206ENST00000548980 SMARCA2P51531 1590 aa19.74■□□□□ 0.75
NCKAP1L-206ENST00000548980 THOC2Q8NI27 1593 aaKnown RBP19.74■□□□□ 0.75
NCKAP1L-206ENST00000548980 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
NCKAP1L-206ENST00000548980 TRIM41Q8WV44 630 aa19.62■□□□□ 0.73
NCKAP1L-206ENST00000548980 BAZ1BQ9UIG0 1483 aaKnown RBP19.61■□□□□ 0.73
NCKAP1L-206ENST00000548980 LAMC3Q9Y6N6 1575 aa19.59■□□□□ 0.73
NCKAP1L-206ENST00000548980 KIF21AQ7Z4S6 1674 aa19.56■□□□□ 0.72
NCKAP1L-206ENST00000548980 PEG3Q9GZU2 1588 aa19.51■□□□□ 0.71
NCKAP1L-206ENST00000548980 BAZ1AQ9NRL2 1556 aaPredicted RBP19.51■□□□□ 0.71
NCKAP1L-206ENST00000548980 PDS5BQ9NTI5 1447 aa19.47■□□□□ 0.71
NCKAP1L-206ENST00000548980 MRC2Q9UBG0 1479 aa19.36■□□□□ 0.69
NCKAP1L-206ENST00000548980 WDR62O43379 1518 aa19.35■□□□□ 0.69
NCKAP1L-206ENST00000548980 MROH2BQ7Z745 1585 aa19.33■□□□□ 0.69
NCKAP1L-206ENST00000548980 CADPSQ9ULU8 1353 aa19.31■□□□□ 0.68
NCKAP1L-206ENST00000548980 CEP164Q9UPV0 1460 aa19.18■□□□□ 0.66
NCKAP1L-206ENST00000548980 OSCARQ8IYS5 282 aa19.15■□□□□ 0.66
NCKAP1L-206ENST00000548980 FANCD2Q9BXW9 1451 aa19.11■□□□□ 0.65
NCKAP1L-206ENST00000548980 WIZO95785 1651 aa19.08■□□□□ 0.64
NCKAP1L-206ENST00000548980 RIMBP3CA6NJZ7 1639 aa19.03■□□□□ 0.64
NCKAP1L-206ENST00000548980 RIMBP3BA6NNM3 1639 aa19.03■□□□□ 0.64
NCKAP1L-206ENST00000548980 RIMBP3Q9UFD9 1639 aa19.03■□□□□ 0.64
NCKAP1L-206ENST00000548980 CFTRP13569 1480 aa19■□□□□ 0.63
NCKAP1L-206ENST00000548980 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
NCKAP1L-206ENST00000548980 ARHGEF11O15085 1522 aa18.92■□□□□ 0.62
NCKAP1L-206ENST00000548980 ZNF608Q9ULD9 1512 aaPredicted RBP18.84■□□□□ 0.61
NCKAP1L-206ENST00000548980 TOP2AP11388 1531 aaKnown RBP18.81■□□□□ 0.6
NCKAP1L-206ENST00000548980 IFT140Q96RY7 1462 aa18.81■□□□□ 0.6
NCKAP1L-206ENST00000548980 PRDM2Q13029 1718 aa18.8■□□□□ 0.6
NCKAP1L-206ENST00000548980 EIF4G3O43432 1585 aaKnown RBP18.74■□□□□ 0.59
NCKAP1L-206ENST00000548980 CYB5RLQ6IPT4 315 aa18.74■□□□□ 0.59
NCKAP1L-206ENST00000548980 RSF1Q96T23 1441 aaPredicted RBP18.73■□□□□ 0.59
NCKAP1L-206ENST00000548980 ARAP1Q96P48 1450 aa18.71■□□□□ 0.59
NCKAP1L-206ENST00000548980 TOPBP1Q92547 1522 aa18.7■□□□□ 0.58
NCKAP1L-206ENST00000548980 TRHP20396 242 aaPredicted RBP18.69■□□□□ 0.58
NCKAP1L-206ENST00000548980 CHD1O14646 1710 aa18.68■□□□□ 0.58
NCKAP1L-206ENST00000548980 ABCC8Q09428 1581 aa18.59■□□□□ 0.57
NCKAP1L-206ENST00000548980 DNMBPQ6XZF7 1577 aa18.59■□□□□ 0.57
NCKAP1L-206ENST00000548980 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.57
NCKAP1L-206ENST00000548980 CCDC88BA6NC98 1476 aa18.58■□□□□ 0.56
NCKAP1L-206ENST00000548980 TARBP1Q13395 1621 aaKnown RBP18.57■□□□□ 0.56
NCKAP1L-206ENST00000548980 FBLN2P98095 1184 aa18.52■□□□□ 0.56
NCKAP1L-206ENST00000548980 AEBP2Q6ZN18 517 aaPredicted RBP18.51■□□□□ 0.55
NCKAP1L-206ENST00000548980 POLA1P09884 1462 aaPredicted RBP18.48■□□□□ 0.55
NCKAP1L-206ENST00000548980 CLASP1Q7Z460 1538 aa18.46■□□□□ 0.55
NCKAP1L-206ENST00000548980 SNAPC4Q5SXM2 1469 aa18.41■□□□□ 0.54
NCKAP1L-206ENST00000548980 RAD54L2Q9Y4B4 1467 aa18.41■□□□□ 0.54
NCKAP1L-206ENST00000548980 SYNJ1O43426 1573 aa18.38■□□□□ 0.53
NCKAP1L-206ENST00000548980 TDRD9Q8NDG6 1382 aaKnown RBP18.38■□□□□ 0.53
NCKAP1L-206ENST00000548980 WDR97A6NE52 1622 aa18.36■□□□□ 0.53
NCKAP1L-206ENST00000548980 SOGA1O94964 1423 aa18.34■□□□□ 0.53
NCKAP1L-206ENST00000548980 MAGI1Q96QZ7 1491 aaPredicted RBP18.33■□□□□ 0.53
NCKAP1L-206ENST00000548980 CHMP7Q8WUX9 453 aaPredicted RBP18.31■□□□□ 0.52
NCKAP1L-206ENST00000548980 FGD5Q6ZNL6 1462 aa18.29■□□□□ 0.52
NCKAP1L-206ENST00000548980 SYNJ2O15056 1496 aa18.27■□□□□ 0.52
NCKAP1L-206ENST00000548980 GAPVD1Q14C86 1478 aa18.27■□□□□ 0.52
NCKAP1L-206ENST00000548980 GRIN2BQ13224 1484 aa18.26■□□□□ 0.51
NCKAP1L-206ENST00000548980 CUX1P39880 1505 aa18.19■□□□□ 0.5
NCKAP1L-206ENST00000548980 PBRM1Q86U86 1689 aa18.19■□□□□ 0.5
NCKAP1L-206ENST00000548980 ERCC6L2Q5T890 1561 aa18.13■□□□□ 0.49
NCKAP1L-206ENST00000548980 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
NCKAP1L-206ENST00000548980 ABCA10Q8WWZ4 1543 aa18.05■□□□□ 0.48
NCKAP1L-206ENST00000548980 GRIN2AQ12879 1464 aa18.05■□□□□ 0.48
NCKAP1L-206ENST00000548980 CEP170Q5SW79 1584 aa18.04■□□□□ 0.48
NCKAP1L-206ENST00000548980 KIF13AQ9H1H9 1805 aa18.03■□□□□ 0.48
NCKAP1L-206ENST00000548980 NUP160Q12769 1436 aa18.01■□□□□ 0.47
NCKAP1L-206ENST00000548980 ADAMTS12P58397 1594 aa18■□□□□ 0.47
NCKAP1L-206ENST00000548980 SHROOM2Q13796 1616 aa18■□□□□ 0.47
NCKAP1L-206ENST00000548980 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.45
NCKAP1L-206ENST00000548980 ABCC10Q5T3U5 1492 aa17.86■□□□□ 0.45
NCKAP1L-206ENST00000548980 WRNQ14191 1432 aaPredicted RBP eCLIP17.85■□□□□ 0.45
NCKAP1L-206ENST00000548980 PRG4Q92954 1404 aaPredicted RBP17.85■□□□□ 0.45
NCKAP1L-206ENST00000548980 DIP2BQ9P265 1576 aa17.83■□□□□ 0.44
NCKAP1L-206ENST00000548980 MAPKBP1O60336 1514 aa17.82■□□□□ 0.44
NCKAP1L-206ENST00000548980 FAM69CQ0P6D2 419 aa17.82■□□□□ 0.44
NCKAP1L-206ENST00000548980 ERICH3Q5RHP9 1530 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms