RNA–Protein interactions for RNA: ENST00000548913.1

C12orf54-204, Transcript of chromosome 12 open reading frame 54, humanhuman

TSL 5

Gene C12orf54, Length 693 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54-204ENST00000548913 NISCHQ9Y2I1 1504 aa22.52■■□□□ 1.2
C12orf54-204ENST00000548913 CCDC180Q9P1Z9 1646 aa19.88■□□□□ 0.77
C12orf54-204ENST00000548913 ABCC9O60706 1549 aa19.16■□□□□ 0.66
C12orf54-204ENST00000548913 ZCCHC6Q5VYS8 1495 aaKnown RBP18.87■□□□□ 0.61
C12orf54-204ENST00000548913 DCAF1Q9Y4B6 1507 aa18.66■□□□□ 0.58
C12orf54-204ENST00000548913 MYO15BQ96JP2 1530 aa18.62■□□□□ 0.57
C12orf54-204ENST00000548913 NACADO15069 1562 aa18.6■□□□□ 0.57
C12orf54-204ENST00000548913 DCAF8L2P0C7V8 631 aa18.55■□□□□ 0.56
C12orf54-204ENST00000548913 RB1CC1Q8TDY2 1594 aa18.54■□□□□ 0.56
C12orf54-204ENST00000548913 SCRIBQ14160 1630 aa18.17■□□□□ 0.5
C12orf54-204ENST00000548913 UNC13AQ9UPW8 1703 aa18.13■□□□□ 0.49
C12orf54-204ENST00000548913 BICRAQ9NZM4 1560 aa18.05■□□□□ 0.48
C12orf54-204ENST00000548913 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
C12orf54-204ENST00000548913 PABPN1Q86U42 306 aaKnown RBP eCLIP17.92■□□□□ 0.46
C12orf54-204ENST00000548913 CECR2Q9BXF3 1484 aa17.55■□□□□ 0.4
C12orf54-204ENST00000548913 EIF4G1Q04637 1599 aaKnown RBP17.51■□□□□ 0.39
C12orf54-204ENST00000548913 BAZ1AQ9NRL2 1556 aaPredicted RBP17.42■□□□□ 0.38
C12orf54-204ENST00000548913 SMARCA4P51532 1647 aa17.42■□□□□ 0.38
C12orf54-204ENST00000548913 MROH2BQ7Z745 1585 aa17.39■□□□□ 0.37
C12orf54-204ENST00000548913 CC2D2AQ9P2K1 1620 aa17.35■□□□□ 0.37
C12orf54-204ENST00000548913 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.36
C12orf54-204ENST00000548913 RSF1Q96T23 1441 aaPredicted RBP17.29■□□□□ 0.36
C12orf54-204ENST00000548913 PEG3Q9GZU2 1588 aa17.26■□□□□ 0.35
C12orf54-204ENST00000548913 ATAD2BQ9ULI0 1458 aa17.25■□□□□ 0.35
C12orf54-204ENST00000548913 SMARCA2P51531 1590 aa17.2■□□□□ 0.34
C12orf54-204ENST00000548913 WIZO95785 1651 aa17.19■□□□□ 0.34
C12orf54-204ENST00000548913 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
C12orf54-204ENST00000548913 HMGXB3Q12766 1538 aa17.14■□□□□ 0.33
C12orf54-204ENST00000548913 BAZ1BQ9UIG0 1483 aaKnown RBP17.09■□□□□ 0.33
C12orf54-204ENST00000548913 TOP2AP11388 1531 aaKnown RBP17.04■□□□□ 0.32
C12orf54-204ENST00000548913 SUPT5HO00267 1087 aaKnown RBP16.97■□□□□ 0.31
C12orf54-204ENST00000548913 CCDC88BA6NC98 1476 aa16.82■□□□□ 0.28
C12orf54-204ENST00000548913 NESP48681 1621 aa16.7■□□□□ 0.26
C12orf54-204ENST00000548913 CFTRP13569 1480 aa16.67■□□□□ 0.26
C12orf54-204ENST00000548913 CADPSQ9ULU8 1353 aa16.67■□□□□ 0.26
C12orf54-204ENST00000548913 LAMC3Q9Y6N6 1575 aa16.66■□□□□ 0.26
C12orf54-204ENST00000548913 PRDM2Q13029 1718 aa16.51■□□□□ 0.23
C12orf54-204ENST00000548913 PDS5BQ9NTI5 1447 aa16.51■□□□□ 0.23
C12orf54-204ENST00000548913 FANCD2Q9BXW9 1451 aa16.49■□□□□ 0.23
C12orf54-204ENST00000548913 KIF21AQ7Z4S6 1674 aa16.47■□□□□ 0.23
C12orf54-204ENST00000548913 CEP164Q9UPV0 1460 aa16.45■□□□□ 0.22
C12orf54-204ENST00000548913 ERCC6Q03468 1493 aa16.43■□□□□ 0.22
C12orf54-204ENST00000548913 THOC2Q8NI27 1593 aaKnown RBP16.41■□□□□ 0.22
C12orf54-204ENST00000548913 MRC2Q9UBG0 1479 aa16.37■□□□□ 0.21
C12orf54-204ENST00000548913 URB2Q14146 1524 aaKnown RBP16.35■□□□□ 0.21
C12orf54-204ENST00000548913 WDR62O43379 1518 aa16.34■□□□□ 0.21
C12orf54-204ENST00000548913 ABCC8Q09428 1581 aa16.32■□□□□ 0.2
C12orf54-204ENST00000548913 CUX1P39880 1505 aa16.29■□□□□ 0.2
C12orf54-204ENST00000548913 DNMBPQ6XZF7 1577 aa16.28■□□□□ 0.2
C12orf54-204ENST00000548913 TOPBP1Q92547 1522 aa16.28■□□□□ 0.2
C12orf54-204ENST00000548913 WRNQ14191 1432 aaPredicted RBP eCLIP16.26■□□□□ 0.19
C12orf54-204ENST00000548913 SYNJ1O43426 1573 aa16.25■□□□□ 0.19
C12orf54-204ENST00000548913 BIVM-ERCC5R4GMW8 1640 aa16.21■□□□□ 0.19
C12orf54-204ENST00000548913 TOP2BQ02880 1626 aa16.2■□□□□ 0.18
C12orf54-204ENST00000548913 CUX2O14529 1486 aa16.2■□□□□ 0.18
C12orf54-204ENST00000548913 POLA1P09884 1462 aaPredicted RBP16.18■□□□□ 0.18
C12orf54-204ENST00000548913 FGD5Q6ZNL6 1462 aa16.17■□□□□ 0.18
C12orf54-204ENST00000548913 RAD54L2Q9Y4B4 1467 aa16.1■□□□□ 0.17
C12orf54-204ENST00000548913 TARBP1Q13395 1621 aaKnown RBP16.09■□□□□ 0.17
C12orf54-204ENST00000548913 IFT140Q96RY7 1462 aa16.08■□□□□ 0.16
C12orf54-204ENST00000548913 SOGA1O94964 1423 aa16.06■□□□□ 0.16
C12orf54-204ENST00000548913 CHIC1Q5VXU3 224 aa16.06■□□□□ 0.16
C12orf54-204ENST00000548913 WDR97A6NE52 1622 aa16.05■□□□□ 0.16
C12orf54-204ENST00000548913 ABCA10Q8WWZ4 1543 aa16.03■□□□□ 0.16
C12orf54-204ENST00000548913 ZNF608Q9ULD9 1512 aaPredicted RBP16.02■□□□□ 0.15
C12orf54-204ENST00000548913 TRIM41Q8WV44 630 aa15.99■□□□□ 0.15
C12orf54-204ENST00000548913 EIF4G3O43432 1585 aaKnown RBP15.97■□□□□ 0.15
C12orf54-204ENST00000548913 ABCA5Q8WWZ7 1642 aa15.97■□□□□ 0.15
C12orf54-204ENST00000548913 TDRD9Q8NDG6 1382 aaKnown RBP15.95■□□□□ 0.14
C12orf54-204ENST00000548913 AQRO60306 1485 aaKnown RBP eCLIP15.93■□□□□ 0.14
C12orf54-204ENST00000548913 GAPVD1Q14C86 1478 aa15.9■□□□□ 0.14
C12orf54-204ENST00000548913 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
C12orf54-204ENST00000548913 KIF27Q86VH2 1401 aa15.87■□□□□ 0.13
C12orf54-204ENST00000548913 GRIN2BQ13224 1484 aa15.85■□□□□ 0.13
C12orf54-204ENST00000548913 PBRM1Q86U86 1689 aa15.85■□□□□ 0.13
C12orf54-204ENST00000548913 SNAPC4Q5SXM2 1469 aa15.83■□□□□ 0.12
C12orf54-204ENST00000548913 ERICH3Q5RHP9 1530 aa15.83■□□□□ 0.12
C12orf54-204ENST00000548913 ADAMTS12P58397 1594 aa15.79■□□□□ 0.12
C12orf54-204ENST00000548913 IGF1RP08069 1367 aa15.79■□□□□ 0.12
C12orf54-204ENST00000548913 MAGI1Q96QZ7 1491 aaPredicted RBP15.78■□□□□ 0.12
C12orf54-204ENST00000548913 EEA1Q15075 1411 aa15.77■□□□□ 0.11
C12orf54-204ENST00000548913 CUL7Q14999 1698 aa15.73■□□□□ 0.11
C12orf54-204ENST00000548913 SYNJ2O15056 1496 aa15.72■□□□□ 0.11
C12orf54-204ENST00000548913 FHAD1B1AJZ9 1412 aa15.72■□□□□ 0.11
C12orf54-204ENST00000548913 PRXQ9BXM0 1461 aa15.71■□□□□ 0.1
C12orf54-204ENST00000548913 CARMIL1Q5VZK9 1371 aa15.68■□□□□ 0.1
C12orf54-204ENST00000548913 FAM9AQ8IZU1 332 aaPredicted RBP15.68■□□□□ 0.1
C12orf54-204ENST00000548913 GRIN2AQ12879 1464 aa15.67■□□□□ 0.1
C12orf54-204ENST00000548913 CSRNP3Q8WYN3 585 aa15.67■□□□□ 0.1
C12orf54-204ENST00000548913 CHD1O14646 1710 aa15.67■□□□□ 0.1
C12orf54-204ENST00000548913 RAPGEF2Q9Y4G8 1499 aa15.63■□□□□ 0.09
C12orf54-204ENST00000548913 KIF21BO75037 1637 aa15.62■□□□□ 0.09
C12orf54-204ENST00000548913 NUP160Q12769 1436 aa15.61■□□□□ 0.09
C12orf54-204ENST00000548913 CEP170Q5SW79 1584 aa15.61■□□□□ 0.09
C12orf54-204ENST00000548913 CHMP7Q8WUX9 453 aaPredicted RBP15.6■□□□□ 0.09
C12orf54-204ENST00000548913 FBLN2P98095 1184 aa15.59■□□□□ 0.09
C12orf54-204ENST00000548913 CLASP1Q7Z460 1538 aa15.57■□□□□ 0.08
C12orf54-204ENST00000548913 GOLGA3Q08378 1498 aa15.53■□□□□ 0.08
C12orf54-204ENST00000548913 OSCARQ8IYS5 282 aa15.5■□□□□ 0.07
C12orf54-204ENST00000548913 KIAA0586Q9BVV6 1533 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms