RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 NISCHQ9Y2I1 1504 aa50.32■■■■■ 5.65
CACNB3-210ENST00000548874 CCDC180Q9P1Z9 1646 aa44.48■■■■■ 4.71
CACNB3-210ENST00000548874 ABCC9O60706 1549 aa42.91■■■■■ 4.46
CACNB3-210ENST00000548874 ZCCHC6Q5VYS8 1495 aaKnown RBP42.06■■■■■ 4.32
CACNB3-210ENST00000548874 DCAF1Q9Y4B6 1507 aa41.69■■■■■ 4.27
CACNB3-210ENST00000548874 NACADO15069 1562 aa41.67■■■■■ 4.26
CACNB3-210ENST00000548874 MYO15BQ96JP2 1530 aa41.66■■■■■ 4.26
CACNB3-210ENST00000548874 DCAF8L2P0C7V8 631 aa41.66■■■■■ 4.26
CACNB3-210ENST00000548874 RB1CC1Q8TDY2 1594 aa41.55■■■■■ 4.24
CACNB3-210ENST00000548874 UNC13AQ9UPW8 1703 aa40.62■■■■■ 4.09
CACNB3-210ENST00000548874 SCRIBQ14160 1630 aa40.59■■■■■ 4.09
CACNB3-210ENST00000548874 BICRAQ9NZM4 1560 aa40.32■■■■■ 4.05
CACNB3-210ENST00000548874 PABPN1Q86U42 306 aaKnown RBP eCLIP40.17■■■■■ 4.02
CACNB3-210ENST00000548874 SHROOM4Q9ULL8 1493 aa40.02■■■■■ 4
CACNB3-210ENST00000548874 EIF4G1Q04637 1599 aaKnown RBP39.18■■■■□ 3.86
CACNB3-210ENST00000548874 CECR2Q9BXF3 1484 aa39.13■■■■□ 3.85
CACNB3-210ENST00000548874 BAZ1AQ9NRL2 1556 aaPredicted RBP38.95■■■■□ 3.83
CACNB3-210ENST00000548874 SMARCA4P51532 1647 aa38.92■■■■□ 3.82
CACNB3-210ENST00000548874 CC2D2AQ9P2K1 1620 aa38.86■■■■□ 3.81
CACNB3-210ENST00000548874 DNAJC5BQ9UF47 199 aa38.86■■■■□ 3.81
CACNB3-210ENST00000548874 MROH2BQ7Z745 1585 aa38.79■■■■□ 3.8
CACNB3-210ENST00000548874 RSF1Q96T23 1441 aaPredicted RBP38.56■■■■□ 3.76
CACNB3-210ENST00000548874 ATAD2BQ9ULI0 1458 aa38.56■■■■□ 3.76
CACNB3-210ENST00000548874 PEG3Q9GZU2 1588 aa38.56■■■■□ 3.76
CACNB3-210ENST00000548874 SMARCA2P51531 1590 aa38.53■■■■□ 3.76
CACNB3-210ENST00000548874 NCAPD3P42695 1498 aa38.46■■■■□ 3.75
CACNB3-210ENST00000548874 WIZO95785 1651 aa38.38■■■■□ 3.73
CACNB3-210ENST00000548874 HMGXB3Q12766 1538 aa38.33■■■■□ 3.73
CACNB3-210ENST00000548874 BAZ1BQ9UIG0 1483 aaKnown RBP38.25■■■■□ 3.71
CACNB3-210ENST00000548874 TOP2AP11388 1531 aaKnown RBP38.03■■■■□ 3.68
CACNB3-210ENST00000548874 SUPT5HO00267 1087 aaKnown RBP37.94■■■■□ 3.66
CACNB3-210ENST00000548874 CCDC88BA6NC98 1476 aa37.57■■■■□ 3.6
CACNB3-210ENST00000548874 CADPSQ9ULU8 1353 aa37.35■■■■□ 3.57
CACNB3-210ENST00000548874 LAMC3Q9Y6N6 1575 aa37.33■■■■□ 3.57
CACNB3-210ENST00000548874 NESP48681 1621 aa37.32■■■■□ 3.57
CACNB3-210ENST00000548874 CFTRP13569 1480 aa37.27■■■■□ 3.56
CACNB3-210ENST00000548874 PDS5BQ9NTI5 1447 aa37.03■■■■□ 3.52
CACNB3-210ENST00000548874 PRDM2Q13029 1718 aa37.02■■■■□ 3.52
CACNB3-210ENST00000548874 ERCC6Q03468 1493 aa36.91■■■■□ 3.5
CACNB3-210ENST00000548874 FANCD2Q9BXW9 1451 aa36.91■■■■□ 3.5
CACNB3-210ENST00000548874 KIF21AQ7Z4S6 1674 aa36.89■■■■□ 3.5
CACNB3-210ENST00000548874 CEP164Q9UPV0 1460 aa36.81■■■■□ 3.48
CACNB3-210ENST00000548874 THOC2Q8NI27 1593 aaKnown RBP36.66■■■■□ 3.46
CACNB3-210ENST00000548874 MRC2Q9UBG0 1479 aa36.64■■■■□ 3.46
CACNB3-210ENST00000548874 URB2Q14146 1524 aaKnown RBP36.53■■■■□ 3.44
CACNB3-210ENST00000548874 WDR62O43379 1518 aa36.52■■■■□ 3.44
CACNB3-210ENST00000548874 ABCC8Q09428 1581 aa36.42■■■■□ 3.42
CACNB3-210ENST00000548874 DNMBPQ6XZF7 1577 aa36.41■■■■□ 3.42
CACNB3-210ENST00000548874 TOPBP1Q92547 1522 aa36.4■■■■□ 3.42
CACNB3-210ENST00000548874 CUX2O14529 1486 aa36.36■■■■□ 3.41
CACNB3-210ENST00000548874 CUX1P39880 1505 aa36.35■■■■□ 3.41
CACNB3-210ENST00000548874 WRNQ14191 1432 aaPredicted RBP eCLIP36.33■■■■□ 3.41
CACNB3-210ENST00000548874 SYNJ1O43426 1573 aa36.22■■■■□ 3.39
CACNB3-210ENST00000548874 TOP2BQ02880 1626 aa36.2■■■■□ 3.39
CACNB3-210ENST00000548874 BIVM-ERCC5R4GMW8 1640 aa36.19■■■■□ 3.38
CACNB3-210ENST00000548874 POLA1P09884 1462 aaPredicted RBP36.13■■■■□ 3.37
CACNB3-210ENST00000548874 FGD5Q6ZNL6 1462 aa36.12■■■■□ 3.37
CACNB3-210ENST00000548874 IFT140Q96RY7 1462 aa36.02■■■■□ 3.36
CACNB3-210ENST00000548874 TARBP1Q13395 1621 aaKnown RBP35.97■■■■□ 3.35
CACNB3-210ENST00000548874 SOGA1O94964 1423 aa35.97■■■■□ 3.35
CACNB3-210ENST00000548874 RAD54L2Q9Y4B4 1467 aa35.95■■■■□ 3.35
CACNB3-210ENST00000548874 WDR97A6NE52 1622 aa35.83■■■■□ 3.33
CACNB3-210ENST00000548874 ABCA10Q8WWZ4 1543 aa35.83■■■■□ 3.33
CACNB3-210ENST00000548874 CHIC1Q5VXU3 224 aa35.81■■■■□ 3.32
CACNB3-210ENST00000548874 TRIM41Q8WV44 630 aa35.81■■■■□ 3.32
CACNB3-210ENST00000548874 ZNF608Q9ULD9 1512 aaPredicted RBP35.81■■■■□ 3.32
CACNB3-210ENST00000548874 EIF4G3O43432 1585 aaKnown RBP35.69■■■■□ 3.3
CACNB3-210ENST00000548874 TDRD9Q8NDG6 1382 aaKnown RBP35.69■■■■□ 3.3
CACNB3-210ENST00000548874 AQRO60306 1485 aaKnown RBP eCLIP35.67■■■■□ 3.3
CACNB3-210ENST00000548874 ABCA5Q8WWZ7 1642 aa35.64■■■■□ 3.3
CACNB3-210ENST00000548874 GAPVD1Q14C86 1478 aa35.57■■■■□ 3.28
CACNB3-210ENST00000548874 KIF27Q86VH2 1401 aa35.51■■■■□ 3.28
CACNB3-210ENST00000548874 GRIN2BQ13224 1484 aa35.49■■■■□ 3.27
CACNB3-210ENST00000548874 PBRM1Q86U86 1689 aa35.46■■■■□ 3.27
CACNB3-210ENST00000548874 ERICH3Q5RHP9 1530 aa35.4■■■■□ 3.26
CACNB3-210ENST00000548874 RUSC2Q8N2Y8 1516 aa35.38■■■■□ 3.25
CACNB3-210ENST00000548874 SNAPC4Q5SXM2 1469 aa35.36■■■■□ 3.25
CACNB3-210ENST00000548874 MAGI1Q96QZ7 1491 aaPredicted RBP35.35■■■■□ 3.25
CACNB3-210ENST00000548874 IGF1RP08069 1367 aa35.31■■■■□ 3.24
CACNB3-210ENST00000548874 ADAMTS12P58397 1594 aa35.25■■■■□ 3.23
CACNB3-210ENST00000548874 EEA1Q15075 1411 aa35.24■■■■□ 3.23
CACNB3-210ENST00000548874 FHAD1B1AJZ9 1412 aa35.2■■■■□ 3.23
CACNB3-210ENST00000548874 SYNJ2O15056 1496 aa35.2■■■■□ 3.23
CACNB3-210ENST00000548874 CUL7Q14999 1698 aa35.18■■■■□ 3.22
CACNB3-210ENST00000548874 CHD1O14646 1710 aa35.11■■■■□ 3.21
CACNB3-210ENST00000548874 CARMIL1Q5VZK9 1371 aa35.1■■■■□ 3.21
CACNB3-210ENST00000548874 CHMP7Q8WUX9 453 aaPredicted RBP35.08■■■■□ 3.21
CACNB3-210ENST00000548874 CSRNP3Q8WYN3 585 aa35.08■■■■□ 3.21
CACNB3-210ENST00000548874 FBLN2P98095 1184 aa35.05■■■■□ 3.2
CACNB3-210ENST00000548874 GRIN2AQ12879 1464 aa35.04■■■■□ 3.2
CACNB3-210ENST00000548874 FAM9AQ8IZU1 332 aaPredicted RBP35.03■■■■□ 3.2
CACNB3-210ENST00000548874 PRXQ9BXM0 1461 aa35.02■■■■□ 3.2
CACNB3-210ENST00000548874 RAPGEF2Q9Y4G8 1499 aa34.97■■■■□ 3.19
CACNB3-210ENST00000548874 OSCARQ8IYS5 282 aa34.92■■■■□ 3.18
CACNB3-210ENST00000548874 NUP160Q12769 1436 aa34.89■■■■□ 3.18
CACNB3-210ENST00000548874 CEP170Q5SW79 1584 aa34.85■■■■□ 3.17
CACNB3-210ENST00000548874 KIF21BO75037 1637 aa34.84■■■■□ 3.17
CACNB3-210ENST00000548874 CLASP1Q7Z460 1538 aa34.79■■■■□ 3.16
CACNB3-210ENST00000548874 KIAA0586Q9BVV6 1533 aa34.68■■■■□ 3.14
CACNB3-210ENST00000548874 GOLGA3Q08378 1498 aa34.66■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms