RNA–Protein interactions for RNA: ENST00000548866.5

RPH3A-213, Transcript of rabphilin 3A, humanhuman

TSL 2 BASIC

Gene RPH3A, Length 2,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-213ENST00000548866 NISCHQ9Y2I1 1504 aa24.95■■□□□ 1.58
RPH3A-213ENST00000548866 CCDC180Q9P1Z9 1646 aa21.53■■□□□ 1.04
RPH3A-213ENST00000548866 ZCCHC6Q5VYS8 1495 aaKnown RBP21.05■□□□□ 0.96
RPH3A-213ENST00000548866 SHROOM4Q9ULL8 1493 aa20.77■□□□□ 0.92
RPH3A-213ENST00000548866 DCAF8L2P0C7V8 631 aa20.7■□□□□ 0.91
RPH3A-213ENST00000548866 DCAF1Q9Y4B6 1507 aa20.56■□□□□ 0.88
RPH3A-213ENST00000548866 ABCC9O60706 1549 aa20.37■□□□□ 0.85
RPH3A-213ENST00000548866 SUPT5HO00267 1087 aaKnown RBP20.17■□□□□ 0.82
RPH3A-213ENST00000548866 MYO15BQ96JP2 1530 aa20.13■□□□□ 0.81
RPH3A-213ENST00000548866 SCRIBQ14160 1630 aa20■□□□□ 0.79
RPH3A-213ENST00000548866 NACADO15069 1562 aa19.93■□□□□ 0.78
RPH3A-213ENST00000548866 RB1CC1Q8TDY2 1594 aa19.72■□□□□ 0.75
RPH3A-213ENST00000548866 UNC13AQ9UPW8 1703 aa19.55■□□□□ 0.72
RPH3A-213ENST00000548866 RSF1Q96T23 1441 aaPredicted RBP19.53■□□□□ 0.72
RPH3A-213ENST00000548866 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
RPH3A-213ENST00000548866 CECR2Q9BXF3 1484 aa19.42■□□□□ 0.7
RPH3A-213ENST00000548866 MROH2BQ7Z745 1585 aa19.34■□□□□ 0.69
RPH3A-213ENST00000548866 PABPN1Q86U42 306 aaKnown RBP eCLIP19.32■□□□□ 0.68
RPH3A-213ENST00000548866 BICRAQ9NZM4 1560 aa19.26■□□□□ 0.67
RPH3A-213ENST00000548866 WIZO95785 1651 aa19.24■□□□□ 0.67
RPH3A-213ENST00000548866 BAZ1AQ9NRL2 1556 aaPredicted RBP19.22■□□□□ 0.67
RPH3A-213ENST00000548866 SMARCA4P51532 1647 aa19.11■□□□□ 0.65
RPH3A-213ENST00000548866 TOP2AP11388 1531 aaKnown RBP18.97■□□□□ 0.63
RPH3A-213ENST00000548866 TRIM41Q8WV44 630 aa18.88■□□□□ 0.61
RPH3A-213ENST00000548866 EIF4G1Q04637 1599 aaKnown RBP18.87■□□□□ 0.61
RPH3A-213ENST00000548866 HRCP23327 699 aa18.85■□□□□ 0.61
RPH3A-213ENST00000548866 PCGF6Q9BYE7 350 aa18.85■□□□□ 0.61
RPH3A-213ENST00000548866 LOC105371045A0A1W2PR82 267 aa18.85■□□□□ 0.61
RPH3A-213ENST00000548866 SMARCA2P51531 1590 aa18.84■□□□□ 0.61
RPH3A-213ENST00000548866 PEG3Q9GZU2 1588 aa18.81■□□□□ 0.6
RPH3A-213ENST00000548866 CCDC88BA6NC98 1476 aa18.8■□□□□ 0.6
RPH3A-213ENST00000548866 ATAD2BQ9ULI0 1458 aa18.67■□□□□ 0.58
RPH3A-213ENST00000548866 FAM9AQ8IZU1 332 aaPredicted RBP18.62■□□□□ 0.57
RPH3A-213ENST00000548866 ABCC8Q09428 1581 aa18.62■□□□□ 0.57
RPH3A-213ENST00000548866 BAZ1BQ9UIG0 1483 aaKnown RBP18.59■□□□□ 0.57
RPH3A-213ENST00000548866 TRIM26Q12899 539 aaPredicted RBP18.5■□□□□ 0.55
RPH3A-213ENST00000548866 PPARGC1BQ86YN6 1023 aaKnown RBP18.44■□□□□ 0.54
RPH3A-213ENST00000548866 HMGXB3Q12766 1538 aa18.42■□□□□ 0.54
RPH3A-213ENST00000548866 EHMT2Q96KQ7 1210 aa18.41■□□□□ 0.54
RPH3A-213ENST00000548866 NCAPD3P42695 1498 aa18.39■□□□□ 0.53
RPH3A-213ENST00000548866 WRNQ14191 1432 aaPredicted RBP eCLIP18.37■□□□□ 0.53
RPH3A-213ENST00000548866 CC2D2AQ9P2K1 1620 aa18.35■□□□□ 0.53
RPH3A-213ENST00000548866 SYNJ1O43426 1573 aa18.33■□□□□ 0.52
RPH3A-213ENST00000548866 SOGA1O94964 1423 aa18.32■□□□□ 0.52
RPH3A-213ENST00000548866 EEA1Q15075 1411 aa18.28■□□□□ 0.52
RPH3A-213ENST00000548866 RUSC2Q8N2Y8 1516 aa18.25■□□□□ 0.51
RPH3A-213ENST00000548866 TOP2BQ02880 1626 aa18.18■□□□□ 0.5
RPH3A-213ENST00000548866 CSRNP3Q8WYN3 585 aa18.18■□□□□ 0.5
RPH3A-213ENST00000548866 BIVM-ERCC5R4GMW8 1640 aa18.16■□□□□ 0.5
RPH3A-213ENST00000548866 CFTRP13569 1480 aa18.12■□□□□ 0.49
RPH3A-213ENST00000548866 PRDM2Q13029 1718 aa18.12■□□□□ 0.49
RPH3A-213ENST00000548866 ZEB1P37275 1124 aaPredicted RBP18.11■□□□□ 0.49
RPH3A-213ENST00000548866 TNIKQ9UKE5 1360 aa18.1■□□□□ 0.49
RPH3A-213ENST00000548866 GOLGA3Q08378 1498 aa18.1■□□□□ 0.49
RPH3A-213ENST00000548866 DNAJC5BQ9UF47 199 aa18.1■□□□□ 0.49
RPH3A-213ENST00000548866 CEP162Q5TB80 1403 aa18.08■□□□□ 0.49
RPH3A-213ENST00000548866 KIF21BO75037 1637 aa18.08■□□□□ 0.48
RPH3A-213ENST00000548866 CEP164Q9UPV0 1460 aa18.04■□□□□ 0.48
RPH3A-213ENST00000548866 CUX1P39880 1505 aa18.04■□□□□ 0.48
RPH3A-213ENST00000548866 UBTFP17480 764 aaKnown RBP18.02■□□□□ 0.47
RPH3A-213ENST00000548866 CADPSQ9ULU8 1353 aa17.98■□□□□ 0.47
RPH3A-213ENST00000548866 NESP48681 1621 aa17.98■□□□□ 0.47
RPH3A-213ENST00000548866 RAPGEF2Q9Y4G8 1499 aa17.92■□□□□ 0.46
RPH3A-213ENST00000548866 ERICH3Q5RHP9 1530 aa17.85■□□□□ 0.45
RPH3A-213ENST00000548866 KIF27Q86VH2 1401 aa17.84■□□□□ 0.45
RPH3A-213ENST00000548866 PRXQ9BXM0 1461 aa17.84■□□□□ 0.45
RPH3A-213ENST00000548866 FANCD2Q9BXW9 1451 aa17.84■□□□□ 0.45
RPH3A-213ENST00000548866 CLIP1P30622 1438 aa17.83■□□□□ 0.45
RPH3A-213ENST00000548866 FGD5Q6ZNL6 1462 aa17.77■□□□□ 0.44
RPH3A-213ENST00000548866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.76■□□□□ 0.43
RPH3A-213ENST00000548866 CUX2O14529 1486 aa17.74■□□□□ 0.43
RPH3A-213ENST00000548866 TTBK1Q5TCY1 1321 aaPredicted RBP17.74■□□□□ 0.43
RPH3A-213ENST00000548866 VPS8Q8N3P4 1428 aa17.74■□□□□ 0.43
RPH3A-213ENST00000548866 CCER1Q8TC90 406 aaPredicted RBP17.73■□□□□ 0.43
RPH3A-213ENST00000548866 LAMC3Q9Y6N6 1575 aa17.73■□□□□ 0.43
RPH3A-213ENST00000548866 DNMBPQ6XZF7 1577 aa17.72■□□□□ 0.43
RPH3A-213ENST00000548866 KIF21AQ7Z4S6 1674 aa17.71■□□□□ 0.43
RPH3A-213ENST00000548866 RANGAP1P46060 587 aaPredicted RBP17.71■□□□□ 0.43
RPH3A-213ENST00000548866 TOPBP1Q92547 1522 aa17.67■□□□□ 0.42
RPH3A-213ENST00000548866 RAD54L2Q9Y4B4 1467 aa17.67■□□□□ 0.42
RPH3A-213ENST00000548866 URB2Q14146 1524 aaKnown RBP17.65■□□□□ 0.42
RPH3A-213ENST00000548866 IGF1RP08069 1367 aa17.65■□□□□ 0.42
RPH3A-213ENST00000548866 ARAP1Q96P48 1450 aa17.62■□□□□ 0.41
RPH3A-213ENST00000548866 POLA1P09884 1462 aaPredicted RBP17.62■□□□□ 0.41
RPH3A-213ENST00000548866 ABCA10Q8WWZ4 1543 aa17.59■□□□□ 0.41
RPH3A-213ENST00000548866 PDS5BQ9NTI5 1447 aa17.58■□□□□ 0.41
RPH3A-213ENST00000548866 CARMIL1Q5VZK9 1371 aa17.57■□□□□ 0.4
RPH3A-213ENST00000548866 APLP2Q06481 763 aa17.55■□□□□ 0.4
RPH3A-213ENST00000548866 WDR97A6NE52 1622 aa17.54■□□□□ 0.4
RPH3A-213ENST00000548866 ARHGAP35Q9NRY4 1499 aa17.53■□□□□ 0.4
RPH3A-213ENST00000548866 CUL7Q14999 1698 aa17.49■□□□□ 0.39
RPH3A-213ENST00000548866 TDRD9Q8NDG6 1382 aaKnown RBP17.46■□□□□ 0.39
RPH3A-213ENST00000548866 ABCA5Q8WWZ7 1642 aa17.45■□□□□ 0.38
RPH3A-213ENST00000548866 CTTNBP2Q8WZ74 1663 aa17.41■□□□□ 0.38
RPH3A-213ENST00000548866 MRC2Q9UBG0 1479 aa17.4■□□□□ 0.38
RPH3A-213ENST00000548866 TARBP1Q13395 1621 aaKnown RBP17.4■□□□□ 0.38
RPH3A-213ENST00000548866 KANK4Q5T7N3 995 aaPredicted RBP17.38■□□□□ 0.37
RPH3A-213ENST00000548866 DIEXFQ68CQ4 756 aaKnown RBP17.38■□□□□ 0.37
RPH3A-213ENST00000548866 GAPVD1Q14C86 1478 aa17.37■□□□□ 0.37
RPH3A-213ENST00000548866 HNRNPUL2Q1KMD3 747 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms