RNA–Protein interactions for RNA: ENST00000548640.5

TMEM106C-209, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-209ENST00000548640 NISCHQ9Y2I1 1504 aa30.63■■■□□ 2.49
TMEM106C-209ENST00000548640 CCDC180Q9P1Z9 1646 aa26.59■■□□□ 1.85
TMEM106C-209ENST00000548640 ZCCHC6Q5VYS8 1495 aaKnown RBP25.82■■□□□ 1.72
TMEM106C-209ENST00000548640 DCAF1Q9Y4B6 1507 aa25.39■■□□□ 1.66
TMEM106C-209ENST00000548640 SHROOM4Q9ULL8 1493 aa25.19■■□□□ 1.62
TMEM106C-209ENST00000548640 DCAF8L2P0C7V8 631 aa25.12■■□□□ 1.61
TMEM106C-209ENST00000548640 MYO15BQ96JP2 1530 aa24.96■■□□□ 1.59
TMEM106C-209ENST00000548640 ABCC9O60706 1549 aa24.68■■□□□ 1.54
TMEM106C-209ENST00000548640 NACADO15069 1562 aa24.67■■□□□ 1.54
TMEM106C-209ENST00000548640 SUPT5HO00267 1087 aaKnown RBP24.47■■□□□ 1.51
TMEM106C-209ENST00000548640 SCRIBQ14160 1630 aa24.43■■□□□ 1.5
TMEM106C-209ENST00000548640 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
TMEM106C-209ENST00000548640 RSF1Q96T23 1441 aaPredicted RBP23.88■■□□□ 1.41
TMEM106C-209ENST00000548640 UNC13AQ9UPW8 1703 aa23.73■■□□□ 1.39
TMEM106C-209ENST00000548640 CECR2Q9BXF3 1484 aa23.68■■□□□ 1.38
TMEM106C-209ENST00000548640 BAZ1AQ9NRL2 1556 aaPredicted RBP23.67■■□□□ 1.38
TMEM106C-209ENST00000548640 CHIC1Q5VXU3 224 aa23.64■■□□□ 1.37
TMEM106C-209ENST00000548640 MROH2BQ7Z745 1585 aa23.62■■□□□ 1.37
TMEM106C-209ENST00000548640 BICRAQ9NZM4 1560 aa23.49■■□□□ 1.35
TMEM106C-209ENST00000548640 SMARCA4P51532 1647 aa23.46■■□□□ 1.35
TMEM106C-209ENST00000548640 WIZO95785 1651 aa23.44■■□□□ 1.34
TMEM106C-209ENST00000548640 TOP2AP11388 1531 aaKnown RBP23.32■■□□□ 1.32
TMEM106C-209ENST00000548640 PABPN1Q86U42 306 aaKnown RBP eCLIP23.31■■□□□ 1.32
TMEM106C-209ENST00000548640 PEG3Q9GZU2 1588 aa23.17■■□□□ 1.3
TMEM106C-209ENST00000548640 SMARCA2P51531 1590 aa23.06■■□□□ 1.28
TMEM106C-209ENST00000548640 TRIM41Q8WV44 630 aa23.05■■□□□ 1.28
TMEM106C-209ENST00000548640 CCDC88BA6NC98 1476 aa23.02■■□□□ 1.28
TMEM106C-209ENST00000548640 EIF4G1Q04637 1599 aaKnown RBP23■■□□□ 1.27
TMEM106C-209ENST00000548640 ATAD2BQ9ULI0 1458 aa22.97■■□□□ 1.27
TMEM106C-209ENST00000548640 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
TMEM106C-209ENST00000548640 HMGXB3Q12766 1538 aa22.77■■□□□ 1.24
TMEM106C-209ENST00000548640 NCAPD3P42695 1498 aa22.73■■□□□ 1.23
TMEM106C-209ENST00000548640 LOC105371045A0A1W2PR82 267 aa22.67■■□□□ 1.22
TMEM106C-209ENST00000548640 ABCC8Q09428 1581 aa22.62■■□□□ 1.21
TMEM106C-209ENST00000548640 FAM9AQ8IZU1 332 aaPredicted RBP22.55■■□□□ 1.2
TMEM106C-209ENST00000548640 WRNQ14191 1432 aaPredicted RBP eCLIP22.53■■□□□ 1.2
TMEM106C-209ENST00000548640 EEA1Q15075 1411 aa22.53■■□□□ 1.2
TMEM106C-209ENST00000548640 CC2D2AQ9P2K1 1620 aa22.35■■□□□ 1.17
TMEM106C-209ENST00000548640 SYNJ1O43426 1573 aa22.34■■□□□ 1.17
TMEM106C-209ENST00000548640 CFTRP13569 1480 aa22.32■■□□□ 1.16
TMEM106C-209ENST00000548640 TOP2BQ02880 1626 aa22.28■■□□□ 1.16
TMEM106C-209ENST00000548640 SOGA1O94964 1423 aa22.28■■□□□ 1.16
TMEM106C-209ENST00000548640 PRDM2Q13029 1718 aa22.27■■□□□ 1.16
TMEM106C-209ENST00000548640 BIVM-ERCC5R4GMW8 1640 aa22.26■■□□□ 1.15
TMEM106C-209ENST00000548640 CSRNP3Q8WYN3 585 aa22.25■■□□□ 1.15
TMEM106C-209ENST00000548640 GOLGA3Q08378 1498 aa22.18■■□□□ 1.14
TMEM106C-209ENST00000548640 CADPSQ9ULU8 1353 aa22.17■■□□□ 1.14
TMEM106C-209ENST00000548640 TNIKQ9UKE5 1360 aa22.16■■□□□ 1.14
TMEM106C-209ENST00000548640 EHMT2Q96KQ7 1210 aa22.16■■□□□ 1.14
TMEM106C-209ENST00000548640 CEP164Q9UPV0 1460 aa22.15■■□□□ 1.14
TMEM106C-209ENST00000548640 KIF21BO75037 1637 aa22.13■■□□□ 1.13
TMEM106C-209ENST00000548640 TRIM26Q12899 539 aaPredicted RBP22.13■■□□□ 1.13
TMEM106C-209ENST00000548640 PCGF6Q9BYE7 350 aa22.13■■□□□ 1.13
TMEM106C-209ENST00000548640 RUSC2Q8N2Y8 1516 aa22.12■■□□□ 1.13
TMEM106C-209ENST00000548640 CUX1P39880 1505 aa22.09■■□□□ 1.13
TMEM106C-209ENST00000548640 CEP162Q5TB80 1403 aa22.05■■□□□ 1.12
TMEM106C-209ENST00000548640 UBTFP17480 764 aaKnown RBP22.02■■□□□ 1.12
TMEM106C-209ENST00000548640 KIF27Q86VH2 1401 aa21.97■■□□□ 1.11
TMEM106C-209ENST00000548640 ERICH3Q5RHP9 1530 aa21.93■■□□□ 1.1
TMEM106C-209ENST00000548640 FANCD2Q9BXW9 1451 aa21.93■■□□□ 1.1
TMEM106C-209ENST00000548640 LAMC3Q9Y6N6 1575 aa21.92■■□□□ 1.1
TMEM106C-209ENST00000548640 HRCP23327 699 aa21.89■■□□□ 1.09
TMEM106C-209ENST00000548640 PRXQ9BXM0 1461 aa21.85■■□□□ 1.09
TMEM106C-209ENST00000548640 DNMBPQ6XZF7 1577 aa21.84■■□□□ 1.09
TMEM106C-209ENST00000548640 RAPGEF2Q9Y4G8 1499 aa21.83■■□□□ 1.09
TMEM106C-209ENST00000548640 FGD5Q6ZNL6 1462 aa21.81■■□□□ 1.08
TMEM106C-209ENST00000548640 CLIP1P30622 1438 aa21.8■■□□□ 1.08
TMEM106C-209ENST00000548640 PDS5BQ9NTI5 1447 aa21.77■■□□□ 1.08
TMEM106C-209ENST00000548640 CUX2O14529 1486 aa21.77■■□□□ 1.07
TMEM106C-209ENST00000548640 NESP48681 1621 aa21.74■■□□□ 1.07
TMEM106C-209ENST00000548640 TOPBP1Q92547 1522 aa21.73■■□□□ 1.07
TMEM106C-209ENST00000548640 VPS8Q8N3P4 1428 aa21.68■■□□□ 1.06
TMEM106C-209ENST00000548640 ABCA10Q8WWZ4 1543 aa21.65■■□□□ 1.06
TMEM106C-209ENST00000548640 POLA1P09884 1462 aaPredicted RBP21.64■■□□□ 1.05
TMEM106C-209ENST00000548640 IGF1RP08069 1367 aa21.63■■□□□ 1.05
TMEM106C-209ENST00000548640 ZEB1P37275 1124 aaPredicted RBP21.6■■□□□ 1.05
TMEM106C-209ENST00000548640 URB2Q14146 1524 aaKnown RBP21.59■■□□□ 1.05
TMEM106C-209ENST00000548640 CARMIL1Q5VZK9 1371 aa21.59■■□□□ 1.05
TMEM106C-209ENST00000548640 APLP2Q06481 763 aa21.57■■□□□ 1.04
TMEM106C-209ENST00000548640 PPARGC1BQ86YN6 1023 aaKnown RBP21.56■■□□□ 1.04
TMEM106C-209ENST00000548640 CUL7Q14999 1698 aa21.53■■□□□ 1.04
TMEM106C-209ENST00000548640 KIF21AQ7Z4S6 1674 aa21.53■■□□□ 1.04
TMEM106C-209ENST00000548640 RAD54L2Q9Y4B4 1467 aa21.52■■□□□ 1.04
TMEM106C-209ENST00000548640 WDR97A6NE52 1622 aa21.51■■□□□ 1.03
TMEM106C-209ENST00000548640 ARAP1Q96P48 1450 aa21.48■■□□□ 1.03
TMEM106C-209ENST00000548640 MRC2Q9UBG0 1479 aa21.45■■□□□ 1.02
TMEM106C-209ENST00000548640 RANGAP1P46060 587 aaPredicted RBP21.44■■□□□ 1.02
TMEM106C-209ENST00000548640 DNAJC5BQ9UF47 199 aa21.44■■□□□ 1.02
TMEM106C-209ENST00000548640 ABCA5Q8WWZ7 1642 aa21.42■■□□□ 1.02
TMEM106C-209ENST00000548640 ARHGAP35Q9NRY4 1499 aa21.4■■□□□ 1.02
TMEM106C-209ENST00000548640 GAPVD1Q14C86 1478 aa21.38■■□□□ 1.01
TMEM106C-209ENST00000548640 TTBK1Q5TCY1 1321 aaPredicted RBP21.35■■□□□ 1.01
TMEM106C-209ENST00000548640 TARBP1Q13395 1621 aaKnown RBP21.33■■□□□ 1.01
TMEM106C-209ENST00000548640 EFCAB5A4FU69 1503 aa21.33■■□□□ 1
TMEM106C-209ENST00000548640 CTTNBP2Q8WZ74 1663 aa21.31■■□□□ 1
TMEM106C-209ENST00000548640 FHAD1B1AJZ9 1412 aa21.29■■□□□ 1
TMEM106C-209ENST00000548640 TDRD9Q8NDG6 1382 aaKnown RBP21.29■■□□□ 1
TMEM106C-209ENST00000548640 WDR62O43379 1518 aa21.28■■□□□ 1
TMEM106C-209ENST00000548640 MAP3K1Q13233 1512 aa21.27■■□□□ 1
TMEM106C-209ENST00000548640 IFT140Q96RY7 1462 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms