RNA–Protein interactions for RNA: ENST00000548477.5

SLC8B1-204, Transcript of solute carrier family 8 member B1, humanhuman

TSL 2

Gene SLC8B1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8B1-204ENST00000548477 NISCHQ9Y2I1 1504 aa39.12■■■■□ 3.85
SLC8B1-204ENST00000548477 CCDC180Q9P1Z9 1646 aa34.16■■■■□ 3.06
SLC8B1-204ENST00000548477 ZCCHC6Q5VYS8 1495 aaKnown RBP32.88■■■□□ 2.85
SLC8B1-204ENST00000548477 SHROOM4Q9ULL8 1493 aa32.4■■■□□ 2.78
SLC8B1-204ENST00000548477 DCAF1Q9Y4B6 1507 aa32.36■■■□□ 2.77
SLC8B1-204ENST00000548477 DCAF8L2P0C7V8 631 aa32.2■■■□□ 2.75
SLC8B1-204ENST00000548477 ABCC9O60706 1549 aa32.19■■■□□ 2.74
SLC8B1-204ENST00000548477 MYO15BQ96JP2 1530 aa31.96■■■□□ 2.71
SLC8B1-204ENST00000548477 NACADO15069 1562 aa31.77■■■□□ 2.68
SLC8B1-204ENST00000548477 SUPT5HO00267 1087 aaKnown RBP31.56■■■□□ 2.64
SLC8B1-204ENST00000548477 RB1CC1Q8TDY2 1594 aa31.49■■■□□ 2.63
SLC8B1-204ENST00000548477 SCRIBQ14160 1630 aa31.38■■■□□ 2.61
SLC8B1-204ENST00000548477 UNC13AQ9UPW8 1703 aa30.96■■■□□ 2.55
SLC8B1-204ENST00000548477 BICRAQ9NZM4 1560 aa30.55■■■□□ 2.48
SLC8B1-204ENST00000548477 CHIC1Q5VXU3 224 aa30.53■■■□□ 2.48
SLC8B1-204ENST00000548477 RSF1Q96T23 1441 aaPredicted RBP30.47■■■□□ 2.47
SLC8B1-204ENST00000548477 CECR2Q9BXF3 1484 aa30.37■■■□□ 2.45
SLC8B1-204ENST00000548477 PABPN1Q86U42 306 aaKnown RBP eCLIP30.31■■■□□ 2.44
SLC8B1-204ENST00000548477 MROH2BQ7Z745 1585 aa30.22■■■□□ 2.43
SLC8B1-204ENST00000548477 BAZ1AQ9NRL2 1556 aaPredicted RBP30.22■■■□□ 2.43
SLC8B1-204ENST00000548477 SMARCA4P51532 1647 aa30.1■■■□□ 2.41
SLC8B1-204ENST00000548477 WIZO95785 1651 aa30.01■■■□□ 2.4
SLC8B1-204ENST00000548477 PEG3Q9GZU2 1588 aa29.73■■■□□ 2.35
SLC8B1-204ENST00000548477 TOP2AP11388 1531 aaKnown RBP29.68■■■□□ 2.34
SLC8B1-204ENST00000548477 EIF4G1Q04637 1599 aaKnown RBP29.62■■■□□ 2.33
SLC8B1-204ENST00000548477 TRIM41Q8WV44 630 aa29.59■■■□□ 2.33
SLC8B1-204ENST00000548477 SMARCA2P51531 1590 aa29.56■■■□□ 2.32
SLC8B1-204ENST00000548477 ATAD2BQ9ULI0 1458 aa29.55■■■□□ 2.32
SLC8B1-204ENST00000548477 LOC105371045A0A1W2PR82 267 aa29.42■■■□□ 2.3
SLC8B1-204ENST00000548477 BAZ1BQ9UIG0 1483 aaKnown RBP29.39■■■□□ 2.3
SLC8B1-204ENST00000548477 CCDC88BA6NC98 1476 aa29.35■■■□□ 2.29
SLC8B1-204ENST00000548477 HMGXB3Q12766 1538 aa29.29■■■□□ 2.28
SLC8B1-204ENST00000548477 NCAPD3P42695 1498 aa29.29■■■□□ 2.28
SLC8B1-204ENST00000548477 CC2D2AQ9P2K1 1620 aa29.18■■■□□ 2.26
SLC8B1-204ENST00000548477 FAM9AQ8IZU1 332 aaPredicted RBP29.11■■■□□ 2.25
SLC8B1-204ENST00000548477 ABCC8Q09428 1581 aa29.01■■■□□ 2.23
SLC8B1-204ENST00000548477 PCGF6Q9BYE7 350 aa28.97■■■□□ 2.23
SLC8B1-204ENST00000548477 HRCP23327 699 aa28.75■■■□□ 2.19
SLC8B1-204ENST00000548477 TRIM26Q12899 539 aaPredicted RBP28.74■■■□□ 2.19
SLC8B1-204ENST00000548477 EHMT2Q96KQ7 1210 aa28.72■■■□□ 2.19
SLC8B1-204ENST00000548477 WRNQ14191 1432 aaPredicted RBP eCLIP28.71■■■□□ 2.19
SLC8B1-204ENST00000548477 EEA1Q15075 1411 aa28.71■■■□□ 2.19
SLC8B1-204ENST00000548477 CFTRP13569 1480 aa28.65■■■□□ 2.18
SLC8B1-204ENST00000548477 PRDM2Q13029 1718 aa28.64■■■□□ 2.18
SLC8B1-204ENST00000548477 SOGA1O94964 1423 aa28.59■■■□□ 2.17
SLC8B1-204ENST00000548477 SYNJ1O43426 1573 aa28.56■■■□□ 2.16
SLC8B1-204ENST00000548477 CADPSQ9ULU8 1353 aa28.52■■■□□ 2.16
SLC8B1-204ENST00000548477 CSRNP3Q8WYN3 585 aa28.46■■■□□ 2.15
SLC8B1-204ENST00000548477 RUSC2Q8N2Y8 1516 aa28.42■■■□□ 2.14
SLC8B1-204ENST00000548477 TNIKQ9UKE5 1360 aa28.39■■■□□ 2.14
SLC8B1-204ENST00000548477 GOLGA3Q08378 1498 aa28.38■■■□□ 2.13
SLC8B1-204ENST00000548477 TOP2BQ02880 1626 aa28.38■■■□□ 2.13
SLC8B1-204ENST00000548477 BIVM-ERCC5R4GMW8 1640 aa28.36■■■□□ 2.13
SLC8B1-204ENST00000548477 DNAJC5BQ9UF47 199 aa28.34■■■□□ 2.13
SLC8B1-204ENST00000548477 CEP162Q5TB80 1403 aa28.34■■■□□ 2.13
SLC8B1-204ENST00000548477 LAMC3Q9Y6N6 1575 aa28.33■■■□□ 2.13
SLC8B1-204ENST00000548477 KIF21BO75037 1637 aa28.31■■■□□ 2.12
SLC8B1-204ENST00000548477 CEP164Q9UPV0 1460 aa28.29■■■□□ 2.12
SLC8B1-204ENST00000548477 NESP48681 1621 aa28.28■■■□□ 2.12
SLC8B1-204ENST00000548477 CUX1P39880 1505 aa28.26■■■□□ 2.11
SLC8B1-204ENST00000548477 UBTFP17480 764 aaKnown RBP28.25■■■□□ 2.11
SLC8B1-204ENST00000548477 FANCD2Q9BXW9 1451 aa28.23■■■□□ 2.11
SLC8B1-204ENST00000548477 PDS5BQ9NTI5 1447 aa28.06■■■□□ 2.08
SLC8B1-204ENST00000548477 ZEB1P37275 1124 aaPredicted RBP28.04■■■□□ 2.08
SLC8B1-204ENST00000548477 PPARGC1BQ86YN6 1023 aaKnown RBP28.04■■■□□ 2.08
SLC8B1-204ENST00000548477 KIF21AQ7Z4S6 1674 aa28.02■■■□□ 2.08
SLC8B1-204ENST00000548477 DNMBPQ6XZF7 1577 aa28.01■■■□□ 2.08
SLC8B1-204ENST00000548477 RAPGEF2Q9Y4G8 1499 aa27.99■■■□□ 2.07
SLC8B1-204ENST00000548477 ERICH3Q5RHP9 1530 aa27.96■■■□□ 2.07
SLC8B1-204ENST00000548477 CLIP1P30622 1438 aa27.95■■■□□ 2.06
SLC8B1-204ENST00000548477 FGD5Q6ZNL6 1462 aa27.94■■■□□ 2.06
SLC8B1-204ENST00000548477 TOPBP1Q92547 1522 aa27.94■■■□□ 2.06
SLC8B1-204ENST00000548477 KIF27Q86VH2 1401 aa27.92■■■□□ 2.06
SLC8B1-204ENST00000548477 URB2Q14146 1524 aaKnown RBP27.88■■■□□ 2.05
SLC8B1-204ENST00000548477 PRXQ9BXM0 1461 aa27.87■■■□□ 2.05
SLC8B1-204ENST00000548477 VPS8Q8N3P4 1428 aa27.8■■■□□ 2.04
SLC8B1-204ENST00000548477 POLA1P09884 1462 aaPredicted RBP27.8■■■□□ 2.04
SLC8B1-204ENST00000548477 CUX2O14529 1486 aa27.75■■■□□ 2.03
SLC8B1-204ENST00000548477 TTBK1Q5TCY1 1321 aaPredicted RBP27.72■■■□□ 2.03
SLC8B1-204ENST00000548477 MRC2Q9UBG0 1479 aa27.71■■■□□ 2.03
SLC8B1-204ENST00000548477 ABCA10Q8WWZ4 1543 aa27.7■■■□□ 2.02
SLC8B1-204ENST00000548477 RAD54L2Q9Y4B4 1467 aa27.69■■■□□ 2.02
SLC8B1-204ENST00000548477 WDR97A6NE52 1622 aa27.68■■■□□ 2.02
SLC8B1-204ENST00000548477 APLP2Q06481 763 aa27.64■■■□□ 2.01
SLC8B1-204ENST00000548477 ERCC6Q03468 1493 aa27.59■■■□□ 2.01
SLC8B1-204ENST00000548477 WDR62O43379 1518 aa27.59■■■□□ 2.01
SLC8B1-204ENST00000548477 RANGAP1P46060 587 aaPredicted RBP27.59■■■□□ 2.01
SLC8B1-204ENST00000548477 IGF1RP08069 1367 aa27.55■■■□□ 2
SLC8B1-204ENST00000548477 TARBP1Q13395 1621 aaKnown RBP27.55■■■□□ 2
SLC8B1-204ENST00000548477 CCER1Q8TC90 406 aaPredicted RBP27.55■■■□□ 2
SLC8B1-204ENST00000548477 ARAP1Q96P48 1450 aa27.54■■■□□ 2
SLC8B1-204ENST00000548477 THOC2Q8NI27 1593 aaKnown RBP27.53■■■□□ 2
SLC8B1-204ENST00000548477 ABCA5Q8WWZ7 1642 aa27.51■■■□□ 2
SLC8B1-204ENST00000548477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.5■■□□□ 1.99
SLC8B1-204ENST00000548477 CARMIL1Q5VZK9 1371 aa27.45■■□□□ 1.98
SLC8B1-204ENST00000548477 CUL7Q14999 1698 aa27.43■■□□□ 1.98
SLC8B1-204ENST00000548477 GAPVD1Q14C86 1478 aa27.4■■□□□ 1.98
SLC8B1-204ENST00000548477 TDRD9Q8NDG6 1382 aaKnown RBP27.39■■□□□ 1.98
SLC8B1-204ENST00000548477 ARHGAP35Q9NRY4 1499 aa27.39■■□□□ 1.97
SLC8B1-204ENST00000548477 IFT140Q96RY7 1462 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms