RNA–Protein interactions for RNA: ENST00000548265.1

PACS2-207, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 2

Gene PACS2, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-207ENST00000548265 NISCHQ9Y2I1 1504 aa35.87■■■■□ 3.33
PACS2-207ENST00000548265 CCDC180Q9P1Z9 1646 aa31.64■■■□□ 2.65
PACS2-207ENST00000548265 ABCC9O60706 1549 aa31.2■■■□□ 2.59
PACS2-207ENST00000548265 ZCCHC6Q5VYS8 1495 aaKnown RBP30.02■■■□□ 2.4
PACS2-207ENST00000548265 DNAJC5BQ9UF47 199 aa29.85■■■□□ 2.37
PACS2-207ENST00000548265 DCAF8L2P0C7V8 631 aa29.81■■■□□ 2.36
PACS2-207ENST00000548265 DCAF1Q9Y4B6 1507 aa29.71■■■□□ 2.35
PACS2-207ENST00000548265 MYO15BQ96JP2 1530 aa29.58■■■□□ 2.33
PACS2-207ENST00000548265 NACADO15069 1562 aa29.56■■■□□ 2.32
PACS2-207ENST00000548265 RB1CC1Q8TDY2 1594 aa29.45■■■□□ 2.31
PACS2-207ENST00000548265 SCRIBQ14160 1630 aa28.91■■■□□ 2.22
PACS2-207ENST00000548265 PABPN1Q86U42 306 aaKnown RBP eCLIP28.82■■■□□ 2.2
PACS2-207ENST00000548265 SHROOM4Q9ULL8 1493 aa28.81■■■□□ 2.2
PACS2-207ENST00000548265 UNC13AQ9UPW8 1703 aa28.77■■■□□ 2.2
PACS2-207ENST00000548265 BICRAQ9NZM4 1560 aa28.61■■■□□ 2.17
PACS2-207ENST00000548265 CECR2Q9BXF3 1484 aa28.22■■■□□ 2.11
PACS2-207ENST00000548265 CC2D2AQ9P2K1 1620 aa28.2■■■□□ 2.1
PACS2-207ENST00000548265 DNAJC5Q9H3Z4 198 aa28.03■■■□□ 2.08
PACS2-207ENST00000548265 EIF4G1Q04637 1599 aaKnown RBP27.99■■■□□ 2.07
PACS2-207ENST00000548265 BAZ1AQ9NRL2 1556 aaPredicted RBP27.81■■■□□ 2.04
PACS2-207ENST00000548265 SMARCA4P51532 1647 aa27.7■■■□□ 2.03
PACS2-207ENST00000548265 MROH2BQ7Z745 1585 aa27.63■■■□□ 2.01
PACS2-207ENST00000548265 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2
PACS2-207ENST00000548265 SUPT5HO00267 1087 aaKnown RBP27.53■■■□□ 2
PACS2-207ENST00000548265 SMARCA2P51531 1590 aa27.42■■□□□ 1.98
PACS2-207ENST00000548265 WIZO95785 1651 aa27.41■■□□□ 1.98
PACS2-207ENST00000548265 PEG3Q9GZU2 1588 aa27.39■■□□□ 1.97
PACS2-207ENST00000548265 ATAD2BQ9ULI0 1458 aa27.34■■□□□ 1.97
PACS2-207ENST00000548265 CUX2O14529 1486 aa27.32■■□□□ 1.96
PACS2-207ENST00000548265 NCAPD3P42695 1498 aa27.22■■□□□ 1.95
PACS2-207ENST00000548265 BAZ1BQ9UIG0 1483 aaKnown RBP27.22■■□□□ 1.95
PACS2-207ENST00000548265 TOP2AP11388 1531 aaKnown RBP27.18■■□□□ 1.94
PACS2-207ENST00000548265 HMGXB3Q12766 1538 aa27.18■■□□□ 1.94
PACS2-207ENST00000548265 ERCC6Q03468 1493 aa27.03■■□□□ 1.92
PACS2-207ENST00000548265 CCDC88BA6NC98 1476 aa26.82■■□□□ 1.88
PACS2-207ENST00000548265 THOC2Q8NI27 1593 aaKnown RBP26.59■■□□□ 1.85
PACS2-207ENST00000548265 NESP48681 1621 aa26.57■■□□□ 1.84
PACS2-207ENST00000548265 CADPSQ9ULU8 1353 aa26.49■■□□□ 1.83
PACS2-207ENST00000548265 CFTRP13569 1480 aa26.46■■□□□ 1.83
PACS2-207ENST00000548265 LAMC3Q9Y6N6 1575 aa26.45■■□□□ 1.82
PACS2-207ENST00000548265 TRIM41Q8WV44 630 aa26.42■■□□□ 1.82
PACS2-207ENST00000548265 PRDM2Q13029 1718 aa26.42■■□□□ 1.82
PACS2-207ENST00000548265 KIF21AQ7Z4S6 1674 aa26.28■■□□□ 1.8
PACS2-207ENST00000548265 PDS5BQ9NTI5 1447 aa26.27■■□□□ 1.8
PACS2-207ENST00000548265 FANCD2Q9BXW9 1451 aa26.2■■□□□ 1.78
PACS2-207ENST00000548265 CEP164Q9UPV0 1460 aa26.13■■□□□ 1.77
PACS2-207ENST00000548265 ABCC8Q09428 1581 aa26.07■■□□□ 1.76
PACS2-207ENST00000548265 CHIC1Q5VXU3 224 aa26.05■■□□□ 1.76
PACS2-207ENST00000548265 WRNQ14191 1432 aaPredicted RBP eCLIP26.05■■□□□ 1.76
PACS2-207ENST00000548265 MRC2Q9UBG0 1479 aa26.04■■□□□ 1.76
PACS2-207ENST00000548265 WDR62O43379 1518 aa26.04■■□□□ 1.76
PACS2-207ENST00000548265 DNMBPQ6XZF7 1577 aa25.9■■□□□ 1.74
PACS2-207ENST00000548265 TOP2BQ02880 1626 aa25.9■■□□□ 1.74
PACS2-207ENST00000548265 BIVM-ERCC5R4GMW8 1640 aa25.89■■□□□ 1.74
PACS2-207ENST00000548265 SYNJ1O43426 1573 aa25.89■■□□□ 1.73
PACS2-207ENST00000548265 CUX1P39880 1505 aa25.88■■□□□ 1.73
PACS2-207ENST00000548265 URB2Q14146 1524 aaKnown RBP25.84■■□□□ 1.73
PACS2-207ENST00000548265 TOPBP1Q92547 1522 aa25.84■■□□□ 1.73
PACS2-207ENST00000548265 OSCARQ8IYS5 282 aa25.77■■□□□ 1.72
PACS2-207ENST00000548265 FGD5Q6ZNL6 1462 aa25.72■■□□□ 1.71
PACS2-207ENST00000548265 POLA1P09884 1462 aaPredicted RBP25.66■■□□□ 1.7
PACS2-207ENST00000548265 RIMBP3CA6NJZ7 1639 aa25.64■■□□□ 1.7
PACS2-207ENST00000548265 RIMBP3BA6NNM3 1639 aa25.64■■□□□ 1.7
PACS2-207ENST00000548265 RIMBP3Q9UFD9 1639 aa25.64■■□□□ 1.7
PACS2-207ENST00000548265 SOGA1O94964 1423 aa25.62■■□□□ 1.69
PACS2-207ENST00000548265 IFT140Q96RY7 1462 aa25.54■■□□□ 1.68
PACS2-207ENST00000548265 RAD54L2Q9Y4B4 1467 aa25.53■■□□□ 1.68
PACS2-207ENST00000548265 ABCA10Q8WWZ4 1543 aa25.51■■□□□ 1.67
PACS2-207ENST00000548265 EEA1Q15075 1411 aa25.5■■□□□ 1.67
PACS2-207ENST00000548265 ARHGEF11O15085 1522 aa25.49■■□□□ 1.67
PACS2-207ENST00000548265 KIF27Q86VH2 1401 aa25.48■■□□□ 1.67
PACS2-207ENST00000548265 TARBP1Q13395 1621 aaKnown RBP25.48■■□□□ 1.67
PACS2-207ENST00000548265 WDR97A6NE52 1622 aa25.46■■□□□ 1.67
PACS2-207ENST00000548265 FAM9AQ8IZU1 332 aaPredicted RBP25.41■■□□□ 1.66
PACS2-207ENST00000548265 TDRD9Q8NDG6 1382 aaKnown RBP25.35■■□□□ 1.65
PACS2-207ENST00000548265 RUSC2Q8N2Y8 1516 aa25.35■■□□□ 1.65
PACS2-207ENST00000548265 ABCA5Q8WWZ7 1642 aa25.33■■□□□ 1.65
PACS2-207ENST00000548265 GAPVD1Q14C86 1478 aa25.33■■□□□ 1.65
PACS2-207ENST00000548265 CSRNP3Q8WYN3 585 aa25.32■■□□□ 1.64
PACS2-207ENST00000548265 ZNF608Q9ULD9 1512 aaPredicted RBP25.28■■□□□ 1.64
PACS2-207ENST00000548265 EIF4G3O43432 1585 aaKnown RBP25.27■■□□□ 1.64
PACS2-207ENST00000548265 AQRO60306 1485 aaKnown RBP eCLIP25.27■■□□□ 1.64
PACS2-207ENST00000548265 PBRM1Q86U86 1689 aa25.26■■□□□ 1.63
PACS2-207ENST00000548265 ERICH3Q5RHP9 1530 aa25.24■■□□□ 1.63
PACS2-207ENST00000548265 GRIN2BQ13224 1484 aa25.23■■□□□ 1.63
PACS2-207ENST00000548265 CUL7Q14999 1698 aa25.2■■□□□ 1.62
PACS2-207ENST00000548265 IGF1RP08069 1367 aa25.19■■□□□ 1.62
PACS2-207ENST00000548265 CYB5RLQ6IPT4 315 aa25.19■■□□□ 1.62
PACS2-207ENST00000548265 ARAP1Q96P48 1450 aa25.19■■□□□ 1.62
PACS2-207ENST00000548265 TRHP20396 242 aaPredicted RBP25.15■■□□□ 1.62
PACS2-207ENST00000548265 CARMIL1Q5VZK9 1371 aa25.13■■□□□ 1.61
PACS2-207ENST00000548265 KIF21BO75037 1637 aa25.12■■□□□ 1.61
PACS2-207ENST00000548265 CHD1O14646 1710 aa25.11■■□□□ 1.61
PACS2-207ENST00000548265 MAGI1Q96QZ7 1491 aaPredicted RBP25.09■■□□□ 1.61
PACS2-207ENST00000548265 SNAPC4Q5SXM2 1469 aa25.09■■□□□ 1.61
PACS2-207ENST00000548265 PRXQ9BXM0 1461 aa25.09■■□□□ 1.61
PACS2-207ENST00000548265 FHAD1B1AJZ9 1412 aa25.07■■□□□ 1.6
PACS2-207ENST00000548265 GOLGA3Q08378 1498 aa25.07■■□□□ 1.6
PACS2-207ENST00000548265 RAPGEF2Q9Y4G8 1499 aa25.07■■□□□ 1.6
PACS2-207ENST00000548265 ADAMTS12P58397 1594 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms