RNA–Protein interactions for RNA: ENST00000548210.1

LINC02400-201, Transcript of long intergenic non-protein coding RNA 2400, humanhuman

TSL 2 BASIC

Gene LINC02400, Length 351 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02400-201ENST00000548210 NISCHQ9Y2I1 1504 aa16.82■□□□□ 0.28
LINC02400-201ENST00000548210 ABCC9O60706 1549 aa16.12■□□□□ 0.17
LINC02400-201ENST00000548210 DNAJC5BQ9UF47 199 aa15.82■□□□□ 0.12
LINC02400-201ENST00000548210 CCDC180Q9P1Z9 1646 aa15.5■□□□□ 0.07
LINC02400-201ENST00000548210 DNAJC5Q9H3Z4 198 aa15.09■□□□□ 0.01
LINC02400-201ENST00000548210 RB1CC1Q8TDY2 1594 aa15.07■□□□□ 0
LINC02400-201ENST00000548210 PABPN1Q86U42 306 aaKnown RBP eCLIP14.8□□□□□ -0.04
LINC02400-201ENST00000548210 UNC13AQ9UPW8 1703 aa14.8□□□□□ -0.04
LINC02400-201ENST00000548210 NACADO15069 1562 aa14.79□□□□□ -0.04
LINC02400-201ENST00000548210 BICRAQ9NZM4 1560 aa14.71□□□□□ -0.05
LINC02400-201ENST00000548210 CECR2Q9BXF3 1484 aa14.62□□□□□ -0.07
LINC02400-201ENST00000548210 CC2D2AQ9P2K1 1620 aa14.59□□□□□ -0.07
LINC02400-201ENST00000548210 SHROOM4Q9ULL8 1493 aa14.44□□□□□ -0.1
LINC02400-201ENST00000548210 MYO15BQ96JP2 1530 aa14.39□□□□□ -0.11
LINC02400-201ENST00000548210 EIF4G1Q04637 1599 aaKnown RBP14.37□□□□□ -0.11
LINC02400-201ENST00000548210 DCAF8L2P0C7V8 631 aa14.29□□□□□ -0.12
LINC02400-201ENST00000548210 CUX2O14529 1486 aa14.28□□□□□ -0.12
LINC02400-201ENST00000548210 TRIM41Q8WV44 630 aa13.99□□□□□ -0.17
LINC02400-201ENST00000548210 SCRIBQ14160 1630 aa13.97□□□□□ -0.17
LINC02400-201ENST00000548210 ERCC6Q03468 1493 aa13.94□□□□□ -0.18
LINC02400-201ENST00000548210 DCAF1Q9Y4B6 1507 aa13.9□□□□□ -0.18
LINC02400-201ENST00000548210 ZCCHC6Q5VYS8 1495 aaKnown RBP13.8□□□□□ -0.2
LINC02400-201ENST00000548210 THOC2Q8NI27 1593 aaKnown RBP13.76□□□□□ -0.21
LINC02400-201ENST00000548210 NCAPD3P42695 1498 aa13.66□□□□□ -0.22
LINC02400-201ENST00000548210 NESP48681 1621 aa13.64□□□□□ -0.23
LINC02400-201ENST00000548210 HMGXB3Q12766 1538 aa13.51□□□□□ -0.25
LINC02400-201ENST00000548210 KIF21AQ7Z4S6 1674 aa13.5□□□□□ -0.25
LINC02400-201ENST00000548210 SMARCA2P51531 1590 aa13.5□□□□□ -0.25
LINC02400-201ENST00000548210 BAZ1AQ9NRL2 1556 aaPredicted RBP13.5□□□□□ -0.25
LINC02400-201ENST00000548210 ATAD2BQ9ULI0 1458 aa13.48□□□□□ -0.25
LINC02400-201ENST00000548210 LAMC3Q9Y6N6 1575 aa13.48□□□□□ -0.25
LINC02400-201ENST00000548210 RIMBP3CA6NJZ7 1639 aa13.4□□□□□ -0.26
LINC02400-201ENST00000548210 RIMBP3BA6NNM3 1639 aa13.4□□□□□ -0.26
LINC02400-201ENST00000548210 RIMBP3Q9UFD9 1639 aa13.4□□□□□ -0.26
LINC02400-201ENST00000548210 OSCARQ8IYS5 282 aa13.38□□□□□ -0.27
LINC02400-201ENST00000548210 WDR62O43379 1518 aa13.37□□□□□ -0.27
LINC02400-201ENST00000548210 PDS5BQ9NTI5 1447 aa13.36□□□□□ -0.27
LINC02400-201ENST00000548210 AEBP2Q6ZN18 517 aaPredicted RBP13.33□□□□□ -0.28
LINC02400-201ENST00000548210 MRC2Q9UBG0 1479 aa13.32□□□□□ -0.28
LINC02400-201ENST00000548210 SMARCA4P51532 1647 aa13.3□□□□□ -0.28
LINC02400-201ENST00000548210 BAZ1BQ9UIG0 1483 aaKnown RBP13.28□□□□□ -0.28
LINC02400-201ENST00000548210 ARHGEF11O15085 1522 aa13.27□□□□□ -0.29
LINC02400-201ENST00000548210 PEG3Q9GZU2 1588 aa13.24□□□□□ -0.29
LINC02400-201ENST00000548210 TRHP20396 242 aaPredicted RBP13.15□□□□□ -0.3
LINC02400-201ENST00000548210 CADPSQ9ULU8 1353 aa13.15□□□□□ -0.3
LINC02400-201ENST00000548210 CEP164Q9UPV0 1460 aa13.1□□□□□ -0.31
LINC02400-201ENST00000548210 CYB5RLQ6IPT4 315 aa13.09□□□□□ -0.31
LINC02400-201ENST00000548210 ARAP1Q96P48 1450 aa13.09□□□□□ -0.31
LINC02400-201ENST00000548210 FANCD2Q9BXW9 1451 aa13.01□□□□□ -0.33
LINC02400-201ENST00000548210 ILDR1Q86SU0 546 aaPredicted RBP12.99□□□□□ -0.33
LINC02400-201ENST00000548210 URB2Q14146 1524 aaKnown RBP12.98□□□□□ -0.33
LINC02400-201ENST00000548210 RSF1Q96T23 1441 aaPredicted RBP12.95□□□□□ -0.34
LINC02400-201ENST00000548210 MROH2BQ7Z745 1585 aa12.94□□□□□ -0.34
LINC02400-201ENST00000548210 ZNF608Q9ULD9 1512 aaPredicted RBP12.93□□□□□ -0.34
LINC02400-201ENST00000548210 CHD1O14646 1710 aa12.92□□□□□ -0.34
LINC02400-201ENST00000548210 CFTRP13569 1480 aa12.89□□□□□ -0.35
LINC02400-201ENST00000548210 IFT140Q96RY7 1462 aa12.88□□□□□ -0.35
LINC02400-201ENST00000548210 EIF4G3O43432 1585 aaKnown RBP12.86□□□□□ -0.35
LINC02400-201ENST00000548210 PRDM2Q13029 1718 aa12.77□□□□□ -0.36
LINC02400-201ENST00000548210 CLASP1Q7Z460 1538 aa12.77□□□□□ -0.37
LINC02400-201ENST00000548210 WIZO95785 1651 aa12.75□□□□□ -0.37
LINC02400-201ENST00000548210 TOPBP1Q92547 1522 aa12.71□□□□□ -0.38
LINC02400-201ENST00000548210 TARBP1Q13395 1621 aaKnown RBP12.7□□□□□ -0.38
LINC02400-201ENST00000548210 AQRO60306 1485 aaKnown RBP eCLIP12.67□□□□□ -0.38
LINC02400-201ENST00000548210 SYNJ1O43426 1573 aa12.64□□□□□ -0.39
LINC02400-201ENST00000548210 KIF13AQ9H1H9 1805 aa12.63□□□□□ -0.39
LINC02400-201ENST00000548210 FBLN2P98095 1184 aa12.63□□□□□ -0.39
LINC02400-201ENST00000548210 GAPVD1Q14C86 1478 aa12.62□□□□□ -0.39
LINC02400-201ENST00000548210 ABCC8Q09428 1581 aa12.61□□□□□ -0.39
LINC02400-201ENST00000548210 KDM4FA0A1W2PPD8 638 aa12.61□□□□□ -0.39
LINC02400-201ENST00000548210 DNMBPQ6XZF7 1577 aa12.6□□□□□ -0.39
LINC02400-201ENST00000548210 SNAPC4Q5SXM2 1469 aa12.55□□□□□ -0.4
LINC02400-201ENST00000548210 TOP2AP11388 1531 aaKnown RBP12.55□□□□□ -0.4
LINC02400-201ENST00000548210 ERCC6L2Q5T890 1561 aa12.53□□□□□ -0.4
LINC02400-201ENST00000548210 WDR97A6NE52 1622 aa12.53□□□□□ -0.4
LINC02400-201ENST00000548210 POLA1P09884 1462 aaPredicted RBP12.52□□□□□ -0.41
LINC02400-201ENST00000548210 MAGI1Q96QZ7 1491 aaPredicted RBP12.52□□□□□ -0.41
LINC02400-201ENST00000548210 SYNJ2O15056 1496 aa12.47□□□□□ -0.41
LINC02400-201ENST00000548210 HECW2Q9P2P5 1572 aa12.46□□□□□ -0.42
LINC02400-201ENST00000548210 TDRD9Q8NDG6 1382 aaKnown RBP12.45□□□□□ -0.42
LINC02400-201ENST00000548210 CHMP7Q8WUX9 453 aaPredicted RBP12.45□□□□□ -0.42
LINC02400-201ENST00000548210 RAD54L2Q9Y4B4 1467 aa12.45□□□□□ -0.42
LINC02400-201ENST00000548210 KDM6BO15054 1643 aa12.44□□□□□ -0.42
LINC02400-201ENST00000548210 FBXO41Q8TF61 875 aa12.41□□□□□ -0.42
LINC02400-201ENST00000548210 GRIN2BQ13224 1484 aa12.4□□□□□ -0.42
LINC02400-201ENST00000548210 ABCC10Q5T3U5 1492 aa12.4□□□□□ -0.43
LINC02400-201ENST00000548210 SOGA1O94964 1423 aa12.39□□□□□ -0.43
LINC02400-201ENST00000548210 CEP170Q5SW79 1584 aa12.38□□□□□ -0.43
LINC02400-201ENST00000548210 DIP2BQ9P265 1576 aa12.38□□□□□ -0.43
LINC02400-201ENST00000548210 CCDC88BA6NC98 1476 aa12.37□□□□□ -0.43
LINC02400-201ENST00000548210 PBRM1Q86U86 1689 aa12.37□□□□□ -0.43
LINC02400-201ENST00000548210 SHROOM2Q13796 1616 aa12.37□□□□□ -0.43
LINC02400-201ENST00000548210 ADGRL1O94910 1474 aa12.35□□□□□ -0.43
LINC02400-201ENST00000548210 MAPKBP1O60336 1514 aa12.33□□□□□ -0.44
LINC02400-201ENST00000548210 FGD5Q6ZNL6 1462 aa12.32□□□□□ -0.44
LINC02400-201ENST00000548210 FAM69CQ0P6D2 419 aa12.31□□□□□ -0.44
LINC02400-201ENST00000548210 LMTK3Q96Q04 1460 aa12.31□□□□□ -0.44
LINC02400-201ENST00000548210 NUP160Q12769 1436 aa12.28□□□□□ -0.44
LINC02400-201ENST00000548210 GRIN2AQ12879 1464 aa12.27□□□□□ -0.45
LINC02400-201ENST00000548210 TSPOAP1O95153 1857 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms