RNA–Protein interactions for RNA: ENST00000548120.1

RNF41-204, Transcript of ring finger protein 41, humanhuman

TSL 2

Gene RNF41, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-204ENST00000548120 AEBP2Q6ZN18 517 aaPredicted RBP18.65■□□□□ 0.58
RNF41-204ENST00000548120 CHIC1Q5VXU3 224 aa17.54■□□□□ 0.4
RNF41-204ENST00000548120 NISCHQ9Y2I1 1504 aa16.98■□□□□ 0.31
RNF41-204ENST00000548120 ABCC9O60706 1549 aa16.16■□□□□ 0.18
RNF41-204ENST00000548120 SENP3Q9H4L4 574 aaPredicted RBP16.04■□□□□ 0.16
RNF41-204ENST00000548120 PHF23Q9BUL5 403 aaPredicted RBP15.76■□□□□ 0.11
RNF41-204ENST00000548120 DNAJC5BQ9UF47 199 aa15.65■□□□□ 0.1
RNF41-204ENST00000548120 CCDC180Q9P1Z9 1646 aa15.45■□□□□ 0.06
RNF41-204ENST00000548120 RB1CC1Q8TDY2 1594 aa15.04■□□□□ -0
RNF41-204ENST00000548120 PABPN1Q86U42 306 aaKnown RBP eCLIP14.95□□□□□ -0.02
RNF41-204ENST00000548120 FOXD1Q16676 465 aa14.93□□□□□ -0.02
RNF41-204ENST00000548120 DNAJC5Q9H3Z4 198 aa14.79□□□□□ -0.04
RNF41-204ENST00000548120 NACADO15069 1562 aa14.77□□□□□ -0.05
RNF41-204ENST00000548120 DCAF8L2P0C7V8 631 aa14.67□□□□□ -0.06
RNF41-204ENST00000548120 BICRAQ9NZM4 1560 aa14.62□□□□□ -0.07
RNF41-204ENST00000548120 UNC13AQ9UPW8 1703 aa14.61□□□□□ -0.07
RNF41-204ENST00000548120 CECR2Q9BXF3 1484 aa14.6□□□□□ -0.07
RNF41-204ENST00000548120 CC2D2AQ9P2K1 1620 aa14.51□□□□□ -0.09
RNF41-204ENST00000548120 SHROOM4Q9ULL8 1493 aa14.35□□□□□ -0.11
RNF41-204ENST00000548120 MYO15BQ96JP2 1530 aa14.34□□□□□ -0.11
RNF41-204ENST00000548120 EIF4G1Q04637 1599 aaKnown RBP14.34□□□□□ -0.11
RNF41-204ENST00000548120 POTEDQ86YR6 584 aa14.2□□□□□ -0.14
RNF41-204ENST00000548120 SCRIBQ14160 1630 aa14.14□□□□□ -0.15
RNF41-204ENST00000548120 MSH5O43196 834 aa14.13□□□□□ -0.15
RNF41-204ENST00000548120 CUX2O14529 1486 aa14.12□□□□□ -0.15
RNF41-204ENST00000548120 ERCC6Q03468 1493 aa14□□□□□ -0.17
RNF41-204ENST00000548120 TRIM41Q8WV44 630 aa13.99□□□□□ -0.17
RNF41-204ENST00000548120 ZCCHC6Q5VYS8 1495 aaKnown RBP13.97□□□□□ -0.17
RNF41-204ENST00000548120 DCAF1Q9Y4B6 1507 aa13.95□□□□□ -0.18
RNF41-204ENST00000548120 PIAS4Q8N2W9 510 aaPredicted RBP13.94□□□□□ -0.18
RNF41-204ENST00000548120 PLPPR3Q6T4P5 718 aa13.91□□□□□ -0.18
RNF41-204ENST00000548120 PPP6R1Q9UPN7 881 aa13.73□□□□□ -0.21
RNF41-204ENST00000548120 ADRA2BP18089 450 aa13.71□□□□□ -0.21
RNF41-204ENST00000548120 NESP48681 1621 aa13.7□□□□□ -0.22
RNF41-204ENST00000548120 NCAPD3P42695 1498 aa13.66□□□□□ -0.22
RNF41-204ENST00000548120 THOC2Q8NI27 1593 aaKnown RBP13.65□□□□□ -0.22
RNF41-204ENST00000548120 SMARCA2P51531 1590 aa13.59□□□□□ -0.23
RNF41-204ENST00000548120 ATAD2BQ9ULI0 1458 aa13.55□□□□□ -0.24
RNF41-204ENST00000548120 HMGXB3Q12766 1538 aa13.51□□□□□ -0.25
RNF41-204ENST00000548120 LAMC3Q9Y6N6 1575 aa13.44□□□□□ -0.26
RNF41-204ENST00000548120 KIF21AQ7Z4S6 1674 aa13.44□□□□□ -0.26
RNF41-204ENST00000548120 BAZ1AQ9NRL2 1556 aaPredicted RBP13.42□□□□□ -0.26
RNF41-204ENST00000548120 BAZ1BQ9UIG0 1483 aaKnown RBP13.42□□□□□ -0.26
RNF41-204ENST00000548120 PDS5BQ9NTI5 1447 aa13.41□□□□□ -0.26
RNF41-204ENST00000548120 SMARCA4P51532 1647 aa13.38□□□□□ -0.27
RNF41-204ENST00000548120 OSCARQ8IYS5 282 aa13.37□□□□□ -0.27
RNF41-204ENST00000548120 MRC2Q9UBG0 1479 aa13.36□□□□□ -0.27
RNF41-204ENST00000548120 WDR62O43379 1518 aa13.33□□□□□ -0.28
RNF41-204ENST00000548120 RIMBP3CA6NJZ7 1639 aa13.28□□□□□ -0.28
RNF41-204ENST00000548120 RIMBP3BA6NNM3 1639 aa13.28□□□□□ -0.28
RNF41-204ENST00000548120 RIMBP3Q9UFD9 1639 aa13.28□□□□□ -0.28
RNF41-204ENST00000548120 CADPSQ9ULU8 1353 aa13.23□□□□□ -0.29
RNF41-204ENST00000548120 TRHP20396 242 aaPredicted RBP13.23□□□□□ -0.29
RNF41-204ENST00000548120 PEG3Q9GZU2 1588 aa13.21□□□□□ -0.29
RNF41-204ENST00000548120 ARHGEF11O15085 1522 aa13.2□□□□□ -0.3
RNF41-204ENST00000548120 CEP164Q9UPV0 1460 aa13.18□□□□□ -0.3
RNF41-204ENST00000548120 CYB5RLQ6IPT4 315 aa13.14□□□□□ -0.31
RNF41-204ENST00000548120 FANCD2Q9BXW9 1451 aa13.11□□□□□ -0.31
RNF41-204ENST00000548120 MROH2BQ7Z745 1585 aa13.1□□□□□ -0.31
RNF41-204ENST00000548120 ARAP1Q96P48 1450 aa13.04□□□□□ -0.32
RNF41-204ENST00000548120 URB2Q14146 1524 aaKnown RBP13.03□□□□□ -0.32
RNF41-204ENST00000548120 ZNF608Q9ULD9 1512 aaPredicted RBP12.99□□□□□ -0.33
RNF41-204ENST00000548120 CFTRP13569 1480 aa12.95□□□□□ -0.34
RNF41-204ENST00000548120 IFT140Q96RY7 1462 aa12.92□□□□□ -0.34
RNF41-204ENST00000548120 RSF1Q96T23 1441 aaPredicted RBP12.89□□□□□ -0.35
RNF41-204ENST00000548120 WIZO95785 1651 aa12.89□□□□□ -0.35
RNF41-204ENST00000548120 EIF4G3O43432 1585 aaKnown RBP12.88□□□□□ -0.35
RNF41-204ENST00000548120 FBLN2P98095 1184 aa12.87□□□□□ -0.35
RNF41-204ENST00000548120 CHD1O14646 1710 aa12.84□□□□□ -0.35
RNF41-204ENST00000548120 AQRO60306 1485 aaKnown RBP eCLIP12.79□□□□□ -0.36
RNF41-204ENST00000548120 ILDR1Q86SU0 546 aaPredicted RBP12.79□□□□□ -0.36
RNF41-204ENST00000548120 TOPBP1Q92547 1522 aa12.78□□□□□ -0.36
RNF41-204ENST00000548120 CLASP1Q7Z460 1538 aa12.72□□□□□ -0.37
RNF41-204ENST00000548120 TOP2AP11388 1531 aaKnown RBP12.7□□□□□ -0.38
RNF41-204ENST00000548120 TARBP1Q13395 1621 aaKnown RBP12.68□□□□□ -0.38
RNF41-204ENST00000548120 DNMBPQ6XZF7 1577 aa12.67□□□□□ -0.38
RNF41-204ENST00000548120 SNAPC4Q5SXM2 1469 aa12.66□□□□□ -0.38
RNF41-204ENST00000548120 PRDM2Q13029 1718 aa12.66□□□□□ -0.38
RNF41-204ENST00000548120 GAPVD1Q14C86 1478 aa12.65□□□□□ -0.38
RNF41-204ENST00000548120 SYNJ1O43426 1573 aa12.65□□□□□ -0.38
RNF41-204ENST00000548120 ABCC8Q09428 1581 aa12.65□□□□□ -0.38
RNF41-204ENST00000548120 MAPK8IP2Q13387 824 aaPredicted RBP12.65□□□□□ -0.38
RNF41-204ENST00000548120 DMRT2Q9Y5R5 561 aa12.65□□□□□ -0.38
RNF41-204ENST00000548120 CHMP7Q8WUX9 453 aaPredicted RBP12.63□□□□□ -0.39
RNF41-204ENST00000548120 TDRD9Q8NDG6 1382 aaKnown RBP12.63□□□□□ -0.39
RNF41-204ENST00000548120 POLA1P09884 1462 aaPredicted RBP12.63□□□□□ -0.39
RNF41-204ENST00000548120 SCAF1Q9H7N4 1312 aaKnown RBP12.62□□□□□ -0.39
RNF41-204ENST00000548120 RAD54L2Q9Y4B4 1467 aa12.6□□□□□ -0.39
RNF41-204ENST00000548120 CCDC88BA6NC98 1476 aa12.56□□□□□ -0.4
RNF41-204ENST00000548120 MAGI1Q96QZ7 1491 aaPredicted RBP12.55□□□□□ -0.4
RNF41-204ENST00000548120 SOGA1O94964 1423 aa12.54□□□□□ -0.4
RNF41-204ENST00000548120 SYNJ2O15056 1496 aa12.54□□□□□ -0.4
RNF41-204ENST00000548120 KDM4FA0A1W2PPD8 638 aa12.53□□□□□ -0.4
RNF41-204ENST00000548120 GRIN2BQ13224 1484 aa12.51□□□□□ -0.41
RNF41-204ENST00000548120 ERCC6L2Q5T890 1561 aa12.5□□□□□ -0.41
RNF41-204ENST00000548120 WDR97A6NE52 1622 aa12.48□□□□□ -0.41
RNF41-204ENST00000548120 FGD5Q6ZNL6 1462 aa12.46□□□□□ -0.41
RNF41-204ENST00000548120 KIF13AQ9H1H9 1805 aa12.44□□□□□ -0.42
RNF41-204ENST00000548120 FAM69CQ0P6D2 419 aa12.41□□□□□ -0.42
RNF41-204ENST00000548120 CEP170Q5SW79 1584 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms