RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 NISCHQ9Y2I1 1504 aa25.78■■□□□ 1.72
RNF41-203ENST00000547967 CCDC180Q9P1Z9 1646 aa22.16■■□□□ 1.14
RNF41-203ENST00000547967 ZCCHC6Q5VYS8 1495 aaKnown RBP21.67■■□□□ 1.06
RNF41-203ENST00000547967 DCAF8L2P0C7V8 631 aa21.63■■□□□ 1.05
RNF41-203ENST00000547967 SHROOM4Q9ULL8 1493 aa21.6■■□□□ 1.05
RNF41-203ENST00000547967 DCAF1Q9Y4B6 1507 aa21.15■□□□□ 0.98
RNF41-203ENST00000547967 ABCC9O60706 1549 aa21.07■□□□□ 0.96
RNF41-203ENST00000547967 SUPT5HO00267 1087 aaKnown RBP20.93■□□□□ 0.94
RNF41-203ENST00000547967 MYO15BQ96JP2 1530 aa20.75■□□□□ 0.91
RNF41-203ENST00000547967 SCRIBQ14160 1630 aa20.7■□□□□ 0.9
RNF41-203ENST00000547967 NACADO15069 1562 aa20.65■□□□□ 0.9
RNF41-203ENST00000547967 RB1CC1Q8TDY2 1594 aa20.45■□□□□ 0.86
RNF41-203ENST00000547967 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
RNF41-203ENST00000547967 CECR2Q9BXF3 1484 aa20.15■□□□□ 0.82
RNF41-203ENST00000547967 UNC13AQ9UPW8 1703 aa20.07■□□□□ 0.8
RNF41-203ENST00000547967 PABPN1Q86U42 306 aaKnown RBP eCLIP20.05■□□□□ 0.8
RNF41-203ENST00000547967 CHIC1Q5VXU3 224 aa20.04■□□□□ 0.8
RNF41-203ENST00000547967 MROH2BQ7Z745 1585 aa20.01■□□□□ 0.79
RNF41-203ENST00000547967 BICRAQ9NZM4 1560 aa19.87■□□□□ 0.77
RNF41-203ENST00000547967 WIZO95785 1651 aa19.86■□□□□ 0.77
RNF41-203ENST00000547967 BAZ1AQ9NRL2 1556 aaPredicted RBP19.85■□□□□ 0.77
RNF41-203ENST00000547967 SMARCA4P51532 1647 aa19.74■□□□□ 0.75
RNF41-203ENST00000547967 TRIM41Q8WV44 630 aa19.55■□□□□ 0.72
RNF41-203ENST00000547967 TOP2AP11388 1531 aaKnown RBP19.54■□□□□ 0.72
RNF41-203ENST00000547967 CCDC88BA6NC98 1476 aa19.47■□□□□ 0.71
RNF41-203ENST00000547967 LOC105371045A0A1W2PR82 267 aa19.44■□□□□ 0.7
RNF41-203ENST00000547967 SMARCA2P51531 1590 aa19.41■□□□□ 0.7
RNF41-203ENST00000547967 ATAD2BQ9ULI0 1458 aa19.4■□□□□ 0.7
RNF41-203ENST00000547967 PEG3Q9GZU2 1588 aa19.38■□□□□ 0.69
RNF41-203ENST00000547967 FAM9AQ8IZU1 332 aaPredicted RBP19.37■□□□□ 0.69
RNF41-203ENST00000547967 BAZ1BQ9UIG0 1483 aaKnown RBP19.32■□□□□ 0.68
RNF41-203ENST00000547967 EIF4G1Q04637 1599 aaKnown RBP19.29■□□□□ 0.68
RNF41-203ENST00000547967 EHMT2Q96KQ7 1210 aa19.23■□□□□ 0.67
RNF41-203ENST00000547967 ABCC8Q09428 1581 aa19.22■□□□□ 0.67
RNF41-203ENST00000547967 NCAPD3P42695 1498 aa19.12■□□□□ 0.65
RNF41-203ENST00000547967 HMGXB3Q12766 1538 aa19.05■□□□□ 0.64
RNF41-203ENST00000547967 WRNQ14191 1432 aaPredicted RBP eCLIP18.99■□□□□ 0.63
RNF41-203ENST00000547967 CC2D2AQ9P2K1 1620 aa18.95■□□□□ 0.62
RNF41-203ENST00000547967 SOGA1O94964 1423 aa18.94■□□□□ 0.62
RNF41-203ENST00000547967 SYNJ1O43426 1573 aa18.88■□□□□ 0.61
RNF41-203ENST00000547967 RUSC2Q8N2Y8 1516 aa18.87■□□□□ 0.61
RNF41-203ENST00000547967 PCGF6Q9BYE7 350 aa18.85■□□□□ 0.61
RNF41-203ENST00000547967 CSRNP3Q8WYN3 585 aa18.82■□□□□ 0.6
RNF41-203ENST00000547967 CFTRP13569 1480 aa18.81■□□□□ 0.6
RNF41-203ENST00000547967 EEA1Q15075 1411 aa18.74■□□□□ 0.59
RNF41-203ENST00000547967 CADPSQ9ULU8 1353 aa18.73■□□□□ 0.59
RNF41-203ENST00000547967 UBTFP17480 764 aaKnown RBP18.72■□□□□ 0.59
RNF41-203ENST00000547967 TOP2BQ02880 1626 aa18.71■□□□□ 0.59
RNF41-203ENST00000547967 DNAJC5BQ9UF47 199 aa18.67■□□□□ 0.58
RNF41-203ENST00000547967 CUX1P39880 1505 aa18.67■□□□□ 0.58
RNF41-203ENST00000547967 BIVM-ERCC5R4GMW8 1640 aa18.63■□□□□ 0.57
RNF41-203ENST00000547967 TRIM26Q12899 539 aaPredicted RBP18.62■□□□□ 0.57
RNF41-203ENST00000547967 PPARGC1BQ86YN6 1023 aaKnown RBP18.62■□□□□ 0.57
RNF41-203ENST00000547967 TNIKQ9UKE5 1360 aa18.6■□□□□ 0.57
RNF41-203ENST00000547967 NESP48681 1621 aa18.59■□□□□ 0.57
RNF41-203ENST00000547967 GOLGA3Q08378 1498 aa18.58■□□□□ 0.57
RNF41-203ENST00000547967 CEP162Q5TB80 1403 aa18.58■□□□□ 0.56
RNF41-203ENST00000547967 PRDM2Q13029 1718 aa18.57■□□□□ 0.56
RNF41-203ENST00000547967 CEP164Q9UPV0 1460 aa18.55■□□□□ 0.56
RNF41-203ENST00000547967 FANCD2Q9BXW9 1451 aa18.54■□□□□ 0.56
RNF41-203ENST00000547967 RANGAP1P46060 587 aaPredicted RBP18.51■□□□□ 0.55
RNF41-203ENST00000547967 RAPGEF2Q9Y4G8 1499 aa18.5■□□□□ 0.55
RNF41-203ENST00000547967 KIF21BO75037 1637 aa18.48■□□□□ 0.55
RNF41-203ENST00000547967 KIF27Q86VH2 1401 aa18.47■□□□□ 0.55
RNF41-203ENST00000547967 TTBK1Q5TCY1 1321 aaPredicted RBP18.44■□□□□ 0.54
RNF41-203ENST00000547967 FGD5Q6ZNL6 1462 aa18.43■□□□□ 0.54
RNF41-203ENST00000547967 CUX2O14529 1486 aa18.41■□□□□ 0.54
RNF41-203ENST00000547967 HRCP23327 699 aa18.4■□□□□ 0.54
RNF41-203ENST00000547967 LAMC3Q9Y6N6 1575 aa18.39■□□□□ 0.53
RNF41-203ENST00000547967 PRXQ9BXM0 1461 aa18.38■□□□□ 0.53
RNF41-203ENST00000547967 CLIP1P30622 1438 aa18.37■□□□□ 0.53
RNF41-203ENST00000547967 TOPBP1Q92547 1522 aa18.34■□□□□ 0.53
RNF41-203ENST00000547967 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.53
RNF41-203ENST00000547967 PDS5BQ9NTI5 1447 aa18.33■□□□□ 0.52
RNF41-203ENST00000547967 DNMBPQ6XZF7 1577 aa18.33■□□□□ 0.52
RNF41-203ENST00000547967 IGF1RP08069 1367 aa18.32■□□□□ 0.52
RNF41-203ENST00000547967 ERICH3Q5RHP9 1530 aa18.3■□□□□ 0.52
RNF41-203ENST00000547967 POLA1P09884 1462 aaPredicted RBP18.3■□□□□ 0.52
RNF41-203ENST00000547967 URB2Q14146 1524 aaKnown RBP18.29■□□□□ 0.52
RNF41-203ENST00000547967 CARMIL1Q5VZK9 1371 aa18.24■□□□□ 0.51
RNF41-203ENST00000547967 KIF21AQ7Z4S6 1674 aa18.23■□□□□ 0.51
RNF41-203ENST00000547967 ABCA10Q8WWZ4 1543 aa18.2■□□□□ 0.5
RNF41-203ENST00000547967 VPS8Q8N3P4 1428 aa18.2■□□□□ 0.5
RNF41-203ENST00000547967 TDRD9Q8NDG6 1382 aaKnown RBP18.18■□□□□ 0.5
RNF41-203ENST00000547967 APLP2Q06481 763 aa18.17■□□□□ 0.5
RNF41-203ENST00000547967 ARAP1Q96P48 1450 aa18.11■□□□□ 0.49
RNF41-203ENST00000547967 ARHGAP35Q9NRY4 1499 aa18.07■□□□□ 0.48
RNF41-203ENST00000547967 GAPVD1Q14C86 1478 aa18.05■□□□□ 0.48
RNF41-203ENST00000547967 MRC2Q9UBG0 1479 aa18.05■□□□□ 0.48
RNF41-203ENST00000547967 P3H3Q8IVL6 736 aa18.04■□□□□ 0.48
RNF41-203ENST00000547967 WDR97A6NE52 1622 aa18.03■□□□□ 0.48
RNF41-203ENST00000547967 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.01■□□□□ 0.47
RNF41-203ENST00000547967 ERCC6Q03468 1493 aa18■□□□□ 0.47
RNF41-203ENST00000547967 TARBP1Q13395 1621 aaKnown RBP17.99■□□□□ 0.47
RNF41-203ENST00000547967 ABCA5Q8WWZ7 1642 aa17.99■□□□□ 0.47
RNF41-203ENST00000547967 KANK4Q5T7N3 995 aaPredicted RBP17.99■□□□□ 0.47
RNF41-203ENST00000547967 AQRO60306 1485 aaKnown RBP eCLIP17.98■□□□□ 0.47
RNF41-203ENST00000547967 CUL7Q14999 1698 aa17.98■□□□□ 0.47
RNF41-203ENST00000547967 HNRNPUL2Q1KMD3 747 aaKnown RBP17.94■□□□□ 0.46
RNF41-203ENST00000547967 CCER1Q8TC90 406 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms