RNA–Protein interactions for RNA: ENST00000547949.6

CALCOCO1-207, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 532 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-207ENST00000547949 NISCHQ9Y2I1 1504 aa29.21■■■□□ 2.27
CALCOCO1-207ENST00000547949 CCDC180Q9P1Z9 1646 aa25.56■■□□□ 1.68
CALCOCO1-207ENST00000547949 ZCCHC6Q5VYS8 1495 aaKnown RBP24.51■■□□□ 1.51
CALCOCO1-207ENST00000547949 ABCC9O60706 1549 aa24.31■■□□□ 1.48
CALCOCO1-207ENST00000547949 DCAF8L2P0C7V8 631 aa24.18■■□□□ 1.46
CALCOCO1-207ENST00000547949 DCAF1Q9Y4B6 1507 aa24.15■■□□□ 1.46
CALCOCO1-207ENST00000547949 MYO15BQ96JP2 1530 aa23.92■■□□□ 1.42
CALCOCO1-207ENST00000547949 NACADO15069 1562 aa23.85■■□□□ 1.41
CALCOCO1-207ENST00000547949 SHROOM4Q9ULL8 1493 aa23.72■■□□□ 1.39
CALCOCO1-207ENST00000547949 RB1CC1Q8TDY2 1594 aa23.69■■□□□ 1.38
CALCOCO1-207ENST00000547949 SCRIBQ14160 1630 aa23.48■■□□□ 1.35
CALCOCO1-207ENST00000547949 UNC13AQ9UPW8 1703 aa23.14■■□□□ 1.3
CALCOCO1-207ENST00000547949 BICRAQ9NZM4 1560 aa22.95■■□□□ 1.26
CALCOCO1-207ENST00000547949 PABPN1Q86U42 306 aaKnown RBP eCLIP22.89■■□□□ 1.25
CALCOCO1-207ENST00000547949 SUPT5HO00267 1087 aaKnown RBP22.74■■□□□ 1.23
CALCOCO1-207ENST00000547949 CECR2Q9BXF3 1484 aa22.7■■□□□ 1.22
CALCOCO1-207ENST00000547949 RSF1Q96T23 1441 aaPredicted RBP22.59■■□□□ 1.21
CALCOCO1-207ENST00000547949 BAZ1AQ9NRL2 1556 aaPredicted RBP22.58■■□□□ 1.2
CALCOCO1-207ENST00000547949 MROH2BQ7Z745 1585 aa22.56■■□□□ 1.2
CALCOCO1-207ENST00000547949 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
CALCOCO1-207ENST00000547949 WIZO95785 1651 aa22.36■■□□□ 1.17
CALCOCO1-207ENST00000547949 EIF4G1Q04637 1599 aaKnown RBP22.28■■□□□ 1.16
CALCOCO1-207ENST00000547949 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
CALCOCO1-207ENST00000547949 SMARCA2P51531 1590 aa22.16■■□□□ 1.14
CALCOCO1-207ENST00000547949 TOP2AP11388 1531 aaKnown RBP22.16■■□□□ 1.14
CALCOCO1-207ENST00000547949 ATAD2BQ9ULI0 1458 aa22.15■■□□□ 1.14
CALCOCO1-207ENST00000547949 BAZ1BQ9UIG0 1483 aaKnown RBP22.04■■□□□ 1.12
CALCOCO1-207ENST00000547949 NCAPD3P42695 1498 aa22■■□□□ 1.11
CALCOCO1-207ENST00000547949 CC2D2AQ9P2K1 1620 aa21.98■■□□□ 1.11
CALCOCO1-207ENST00000547949 HMGXB3Q12766 1538 aa21.96■■□□□ 1.11
CALCOCO1-207ENST00000547949 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
CALCOCO1-207ENST00000547949 DNAJC5BQ9UF47 199 aa21.88■■□□□ 1.09
CALCOCO1-207ENST00000547949 CHIC1Q5VXU3 224 aa21.67■■□□□ 1.06
CALCOCO1-207ENST00000547949 CFTRP13569 1480 aa21.46■■□□□ 1.03
CALCOCO1-207ENST00000547949 CADPSQ9ULU8 1353 aa21.42■■□□□ 1.02
CALCOCO1-207ENST00000547949 TRIM41Q8WV44 630 aa21.4■■□□□ 1.02
CALCOCO1-207ENST00000547949 ABCC8Q09428 1581 aa21.39■■□□□ 1.01
CALCOCO1-207ENST00000547949 PRDM2Q13029 1718 aa21.33■■□□□ 1.01
CALCOCO1-207ENST00000547949 NESP48681 1621 aa21.29■■□□□ 1
CALCOCO1-207ENST00000547949 WRNQ14191 1432 aaPredicted RBP eCLIP21.29■■□□□ 1
CALCOCO1-207ENST00000547949 LAMC3Q9Y6N6 1575 aa21.27■■□□□ 1
CALCOCO1-207ENST00000547949 SYNJ1O43426 1573 aa21.2■□□□□ 0.98
CALCOCO1-207ENST00000547949 FANCD2Q9BXW9 1451 aa21.2■□□□□ 0.98
CALCOCO1-207ENST00000547949 TOP2BQ02880 1626 aa21.13■□□□□ 0.97
CALCOCO1-207ENST00000547949 PDS5BQ9NTI5 1447 aa21.12■□□□□ 0.97
CALCOCO1-207ENST00000547949 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
CALCOCO1-207ENST00000547949 CUX1P39880 1505 aa21.11■□□□□ 0.97
CALCOCO1-207ENST00000547949 CEP164Q9UPV0 1460 aa21.08■□□□□ 0.97
CALCOCO1-207ENST00000547949 KIF21AQ7Z4S6 1674 aa21.02■□□□□ 0.96
CALCOCO1-207ENST00000547949 FAM9AQ8IZU1 332 aaPredicted RBP21.01■□□□□ 0.95
CALCOCO1-207ENST00000547949 DNMBPQ6XZF7 1577 aa20.98■□□□□ 0.95
CALCOCO1-207ENST00000547949 SOGA1O94964 1423 aa20.95■□□□□ 0.95
CALCOCO1-207ENST00000547949 TOPBP1Q92547 1522 aa20.94■□□□□ 0.94
CALCOCO1-207ENST00000547949 URB2Q14146 1524 aaKnown RBP20.94■□□□□ 0.94
CALCOCO1-207ENST00000547949 FGD5Q6ZNL6 1462 aa20.91■□□□□ 0.94
CALCOCO1-207ENST00000547949 EEA1Q15075 1411 aa20.9■□□□□ 0.94
CALCOCO1-207ENST00000547949 ERCC6Q03468 1493 aa20.88■□□□□ 0.93
CALCOCO1-207ENST00000547949 RUSC2Q8N2Y8 1516 aa20.88■□□□□ 0.93
CALCOCO1-207ENST00000547949 MRC2Q9UBG0 1479 aa20.88■□□□□ 0.93
CALCOCO1-207ENST00000547949 LOC105371045A0A1W2PR82 267 aa20.83■□□□□ 0.93
CALCOCO1-207ENST00000547949 POLA1P09884 1462 aaPredicted RBP20.82■□□□□ 0.92
CALCOCO1-207ENST00000547949 CSRNP3Q8WYN3 585 aa20.79■□□□□ 0.92
CALCOCO1-207ENST00000547949 KIF27Q86VH2 1401 aa20.77■□□□□ 0.91
CALCOCO1-207ENST00000547949 RAD54L2Q9Y4B4 1467 aa20.76■□□□□ 0.91
CALCOCO1-207ENST00000547949 WDR62O43379 1518 aa20.76■□□□□ 0.91
CALCOCO1-207ENST00000547949 CUX2O14529 1486 aa20.75■□□□□ 0.91
CALCOCO1-207ENST00000547949 THOC2Q8NI27 1593 aaKnown RBP20.72■□□□□ 0.91
CALCOCO1-207ENST00000547949 EHMT2Q96KQ7 1210 aa20.72■□□□□ 0.91
CALCOCO1-207ENST00000547949 ABCA10Q8WWZ4 1543 aa20.72■□□□□ 0.91
CALCOCO1-207ENST00000547949 WDR97A6NE52 1622 aa20.67■□□□□ 0.9
CALCOCO1-207ENST00000547949 KIF21BO75037 1637 aa20.64■□□□□ 0.9
CALCOCO1-207ENST00000547949 TARBP1Q13395 1621 aaKnown RBP20.64■□□□□ 0.89
CALCOCO1-207ENST00000547949 GOLGA3Q08378 1498 aa20.62■□□□□ 0.89
CALCOCO1-207ENST00000547949 IFT140Q96RY7 1462 aa20.6■□□□□ 0.89
CALCOCO1-207ENST00000547949 IGF1RP08069 1367 aa20.58■□□□□ 0.88
CALCOCO1-207ENST00000547949 TDRD9Q8NDG6 1382 aaKnown RBP20.58■□□□□ 0.88
CALCOCO1-207ENST00000547949 ABCA5Q8WWZ7 1642 aa20.56■□□□□ 0.88
CALCOCO1-207ENST00000547949 PRXQ9BXM0 1461 aa20.56■□□□□ 0.88
CALCOCO1-207ENST00000547949 RAPGEF2Q9Y4G8 1499 aa20.54■□□□□ 0.88
CALCOCO1-207ENST00000547949 ERICH3Q5RHP9 1530 aa20.53■□□□□ 0.88
CALCOCO1-207ENST00000547949 GAPVD1Q14C86 1478 aa20.53■□□□□ 0.88
CALCOCO1-207ENST00000547949 UBTFP17480 764 aaKnown RBP20.52■□□□□ 0.88
CALCOCO1-207ENST00000547949 TNIKQ9UKE5 1360 aa20.5■□□□□ 0.87
CALCOCO1-207ENST00000547949 CARMIL1Q5VZK9 1371 aa20.48■□□□□ 0.87
CALCOCO1-207ENST00000547949 ZNF608Q9ULD9 1512 aaPredicted RBP20.47■□□□□ 0.87
CALCOCO1-207ENST00000547949 AQRO60306 1485 aaKnown RBP eCLIP20.46■□□□□ 0.871e-6■■■■■ 31.2
CALCOCO1-207ENST00000547949 CUL7Q14999 1698 aa20.45■□□□□ 0.86
CALCOCO1-207ENST00000547949 PBRM1Q86U86 1689 aa20.42■□□□□ 0.86
CALCOCO1-207ENST00000547949 GRIN2BQ13224 1484 aa20.41■□□□□ 0.86
CALCOCO1-207ENST00000547949 EIF4G3O43432 1585 aaKnown RBP20.4■□□□□ 0.86
CALCOCO1-207ENST00000547949 CEP162Q5TB80 1403 aa20.39■□□□□ 0.85
CALCOCO1-207ENST00000547949 FHAD1B1AJZ9 1412 aa20.32■□□□□ 0.84
CALCOCO1-207ENST00000547949 ADAMTS12P58397 1594 aa20.32■□□□□ 0.84
CALCOCO1-207ENST00000547949 SNAPC4Q5SXM2 1469 aa20.29■□□□□ 0.84
CALCOCO1-207ENST00000547949 CLIP1P30622 1438 aa20.27■□□□□ 0.84
CALCOCO1-207ENST00000547949 MAGI1Q96QZ7 1491 aaPredicted RBP20.24■□□□□ 0.83
CALCOCO1-207ENST00000547949 RANGAP1P46060 587 aaPredicted RBP20.24■□□□□ 0.83
CALCOCO1-207ENST00000547949 CTTNBP2Q8WZ74 1663 aa20.19■□□□□ 0.82
CALCOCO1-207ENST00000547949 SYNJ2O15056 1496 aa20.18■□□□□ 0.82
CALCOCO1-207ENST00000547949 GRIN2AQ12879 1464 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms