RNA–Protein interactions for RNA: ENST00000547752.5

PTPRR-206, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,729 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-206ENST00000547752 NISCHQ9Y2I1 1504 aa23.02■■□□□ 1.28
PTPRR-206ENST00000547752 AEBP2Q6ZN18 517 aaPredicted RBP21.56■■□□□ 1.04
PTPRR-206ENST00000547752 CCDC180Q9P1Z9 1646 aa20.29■□□□□ 0.84
PTPRR-206ENST00000547752 CHIC1Q5VXU3 224 aa20.05■□□□□ 0.8
PTPRR-206ENST00000547752 ABCC9O60706 1549 aa19.68■□□□□ 0.74
PTPRR-206ENST00000547752 ZCCHC6Q5VYS8 1495 aaKnown RBP19.22■□□□□ 0.67
PTPRR-206ENST00000547752 DCAF8L2P0C7V8 631 aa19.12■□□□□ 0.65
PTPRR-206ENST00000547752 NACADO15069 1562 aa19.05■□□□□ 0.64
PTPRR-206ENST00000547752 DCAF1Q9Y4B6 1507 aa19.04■□□□□ 0.64
PTPRR-206ENST00000547752 MYO15BQ96JP2 1530 aa19.01■□□□□ 0.63
PTPRR-206ENST00000547752 RB1CC1Q8TDY2 1594 aa18.99■□□□□ 0.63
PTPRR-206ENST00000547752 POTEDQ86YR6 584 aa18.6■□□□□ 0.57
PTPRR-206ENST00000547752 SCRIBQ14160 1630 aa18.58■□□□□ 0.56
PTPRR-206ENST00000547752 UNC13AQ9UPW8 1703 aa18.57■□□□□ 0.56
PTPRR-206ENST00000547752 SENP3Q9H4L4 574 aaPredicted RBP18.48■□□□□ 0.55
PTPRR-206ENST00000547752 BICRAQ9NZM4 1560 aa18.47■□□□□ 0.55
PTPRR-206ENST00000547752 PABPN1Q86U42 306 aaKnown RBP eCLIP18.46■□□□□ 0.55
PTPRR-206ENST00000547752 SHROOM4Q9ULL8 1493 aa18.36■□□□□ 0.53
PTPRR-206ENST00000547752 PHF23Q9BUL5 403 aaPredicted RBP18.11■□□□□ 0.49
PTPRR-206ENST00000547752 CECR2Q9BXF3 1484 aa17.94■□□□□ 0.46
PTPRR-206ENST00000547752 EIF4G1Q04637 1599 aaKnown RBP17.93■□□□□ 0.46
PTPRR-206ENST00000547752 DNAJC5BQ9UF47 199 aa17.92■□□□□ 0.46
PTPRR-206ENST00000547752 CC2D2AQ9P2K1 1620 aa17.8■□□□□ 0.44
PTPRR-206ENST00000547752 SMARCA4P51532 1647 aa17.79■□□□□ 0.44
PTPRR-206ENST00000547752 BAZ1AQ9NRL2 1556 aaPredicted RBP17.79■□□□□ 0.44
PTPRR-206ENST00000547752 MROH2BQ7Z745 1585 aa17.76■□□□□ 0.43
PTPRR-206ENST00000547752 ATAD2BQ9ULI0 1458 aa17.66■□□□□ 0.42
PTPRR-206ENST00000547752 RSF1Q96T23 1441 aaPredicted RBP17.65■□□□□ 0.42
PTPRR-206ENST00000547752 PEG3Q9GZU2 1588 aa17.61■□□□□ 0.41
PTPRR-206ENST00000547752 NCAPD3P42695 1498 aa17.6■□□□□ 0.41
PTPRR-206ENST00000547752 SMARCA2P51531 1590 aa17.6■□□□□ 0.41
PTPRR-206ENST00000547752 WIZO95785 1651 aa17.57■□□□□ 0.4
PTPRR-206ENST00000547752 HMGXB3Q12766 1538 aa17.51■□□□□ 0.39
PTPRR-206ENST00000547752 BAZ1BQ9UIG0 1483 aaKnown RBP17.49■□□□□ 0.39
PTPRR-206ENST00000547752 SUPT5HO00267 1087 aaKnown RBP17.38■□□□□ 0.37
PTPRR-206ENST00000547752 TOP2AP11388 1531 aaKnown RBP17.38■□□□□ 0.37
PTPRR-206ENST00000547752 FOXD1Q16676 465 aa17.36■□□□□ 0.37
PTPRR-206ENST00000547752 CCDC88BA6NC98 1476 aa17.21■□□□□ 0.35
PTPRR-206ENST00000547752 NESP48681 1621 aa17.13■□□□□ 0.33
PTPRR-206ENST00000547752 CADPSQ9ULU8 1353 aa17.1■□□□□ 0.33
PTPRR-206ENST00000547752 LAMC3Q9Y6N6 1575 aa17.05■□□□□ 0.32
PTPRR-206ENST00000547752 CFTRP13569 1480 aa17.05■□□□□ 0.32
PTPRR-206ENST00000547752 PDS5BQ9NTI5 1447 aa16.94■□□□□ 0.3
PTPRR-206ENST00000547752 ERCC6Q03468 1493 aa16.9■□□□□ 0.3
PTPRR-206ENST00000547752 FANCD2Q9BXW9 1451 aa16.89■□□□□ 0.29
PTPRR-206ENST00000547752 KIF21AQ7Z4S6 1674 aa16.88■□□□□ 0.29
PTPRR-206ENST00000547752 PRDM2Q13029 1718 aa16.87■□□□□ 0.29
PTPRR-206ENST00000547752 CEP164Q9UPV0 1460 aa16.83■□□□□ 0.28
PTPRR-206ENST00000547752 THOC2Q8NI27 1593 aaKnown RBP16.78■□□□□ 0.28
PTPRR-206ENST00000547752 MRC2Q9UBG0 1479 aa16.77■□□□□ 0.28
PTPRR-206ENST00000547752 URB2Q14146 1524 aaKnown RBP16.73■□□□□ 0.27
PTPRR-206ENST00000547752 MSH5O43196 834 aa16.72■□□□□ 0.27
PTPRR-206ENST00000547752 WDR62O43379 1518 aa16.7■□□□□ 0.26
PTPRR-206ENST00000547752 TOPBP1Q92547 1522 aa16.66■□□□□ 0.26
PTPRR-206ENST00000547752 CUX2O14529 1486 aa16.64■□□□□ 0.25
PTPRR-206ENST00000547752 CUX1P39880 1505 aa16.64■□□□□ 0.25
PTPRR-206ENST00000547752 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
PTPRR-206ENST00000547752 DNMBPQ6XZF7 1577 aa16.64■□□□□ 0.25
PTPRR-206ENST00000547752 WRNQ14191 1432 aaPredicted RBP eCLIP16.61■□□□□ 0.25
PTPRR-206ENST00000547752 SYNJ1O43426 1573 aa16.57■□□□□ 0.24
PTPRR-206ENST00000547752 POLA1P09884 1462 aaPredicted RBP16.54■□□□□ 0.24
PTPRR-206ENST00000547752 TOP2BQ02880 1626 aa16.53■□□□□ 0.24
PTPRR-206ENST00000547752 FGD5Q6ZNL6 1462 aa16.53■□□□□ 0.24
PTPRR-206ENST00000547752 BIVM-ERCC5R4GMW8 1640 aa16.52■□□□□ 0.24
PTPRR-206ENST00000547752 RAD54L2Q9Y4B4 1467 aa16.49■□□□□ 0.23
PTPRR-206ENST00000547752 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
PTPRR-206ENST00000547752 SOGA1O94964 1423 aa16.47■□□□□ 0.23
PTPRR-206ENST00000547752 TARBP1Q13395 1621 aaKnown RBP16.46■□□□□ 0.23
PTPRR-206ENST00000547752 ZNF608Q9ULD9 1512 aaPredicted RBP16.42■□□□□ 0.22
PTPRR-206ENST00000547752 ABCA10Q8WWZ4 1543 aa16.38■□□□□ 0.21
PTPRR-206ENST00000547752 TRIM41Q8WV44 630 aa16.38■□□□□ 0.21
PTPRR-206ENST00000547752 TDRD9Q8NDG6 1382 aaKnown RBP16.37■□□□□ 0.21
PTPRR-206ENST00000547752 WDR97A6NE52 1622 aa16.37■□□□□ 0.21
PTPRR-206ENST00000547752 AQRO60306 1485 aaKnown RBP eCLIP16.36■□□□□ 0.21
PTPRR-206ENST00000547752 EIF4G3O43432 1585 aaKnown RBP16.32■□□□□ 0.2
PTPRR-206ENST00000547752 ABCA5Q8WWZ7 1642 aa16.28■□□□□ 0.2
PTPRR-206ENST00000547752 GAPVD1Q14C86 1478 aa16.27■□□□□ 0.2
PTPRR-206ENST00000547752 GRIN2BQ13224 1484 aa16.23■□□□□ 0.19
PTPRR-206ENST00000547752 KIF27Q86VH2 1401 aa16.23■□□□□ 0.19
PTPRR-206ENST00000547752 RUSC2Q8N2Y8 1516 aa16.23■□□□□ 0.19
PTPRR-206ENST00000547752 PBRM1Q86U86 1689 aa16.2■□□□□ 0.18
PTPRR-206ENST00000547752 SNAPC4Q5SXM2 1469 aa16.19■□□□□ 0.18
PTPRR-206ENST00000547752 IGF1RP08069 1367 aa16.18■□□□□ 0.18
PTPRR-206ENST00000547752 ERICH3Q5RHP9 1530 aa16.17■□□□□ 0.18
PTPRR-206ENST00000547752 MAGI1Q96QZ7 1491 aaPredicted RBP16.15■□□□□ 0.18
PTPRR-206ENST00000547752 ADAMTS12P58397 1594 aa16.11■□□□□ 0.17
PTPRR-206ENST00000547752 FHAD1B1AJZ9 1412 aa16.1■□□□□ 0.17
PTPRR-206ENST00000547752 SYNJ2O15056 1496 aa16.09■□□□□ 0.17
PTPRR-206ENST00000547752 FBLN2P98095 1184 aa16.08■□□□□ 0.16
PTPRR-206ENST00000547752 EEA1Q15075 1411 aa16.07■□□□□ 0.16
PTPRR-206ENST00000547752 FAM9AQ8IZU1 332 aaPredicted RBP16.07■□□□□ 0.16
PTPRR-206ENST00000547752 CHMP7Q8WUX9 453 aaPredicted RBP16.07■□□□□ 0.16
PTPRR-206ENST00000547752 CARMIL1Q5VZK9 1371 aa16.07■□□□□ 0.16
PTPRR-206ENST00000547752 CHD1O14646 1710 aa16.06■□□□□ 0.16
PTPRR-206ENST00000547752 CSRNP3Q8WYN3 585 aa16.05■□□□□ 0.16
PTPRR-206ENST00000547752 CUL7Q14999 1698 aa16.05■□□□□ 0.16
PTPRR-206ENST00000547752 GRIN2AQ12879 1464 aa16.03■□□□□ 0.16
PTPRR-206ENST00000547752 PRXQ9BXM0 1461 aa16.01■□□□□ 0.15
PTPRR-206ENST00000547752 OSCARQ8IYS5 282 aa16.01■□□□□ 0.15
PTPRR-206ENST00000547752 RAPGEF2Q9Y4G8 1499 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms