RNA–Protein interactions for RNA: ENST00000547706.1

RPAP3-204, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 2

Gene RPAP3, Length 420 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-204ENST00000547706 NISCHQ9Y2I1 1504 aa33.91■■■■□ 3.02
RPAP3-204ENST00000547706 CCDC180Q9P1Z9 1646 aa30.15■■■□□ 2.42
RPAP3-204ENST00000547706 ABCC9O60706 1549 aa29.11■■■□□ 2.25
RPAP3-204ENST00000547706 NACADO15069 1562 aa28.28■■■□□ 2.12
RPAP3-204ENST00000547706 ZCCHC6Q5VYS8 1495 aaKnown RBP28.28■■■□□ 2.12
RPAP3-204ENST00000547706 MYO15BQ96JP2 1530 aa28.25■■■□□ 2.11
RPAP3-204ENST00000547706 RB1CC1Q8TDY2 1594 aa28.24■■■□□ 2.11
RPAP3-204ENST00000547706 DCAF1Q9Y4B6 1507 aa28.17■■■□□ 2.1
RPAP3-204ENST00000547706 DCAF8L2P0C7V8 631 aa28.11■■■□□ 2.09
RPAP3-204ENST00000547706 UNC13AQ9UPW8 1703 aa27.57■■■□□ 2
RPAP3-204ENST00000547706 SCRIBQ14160 1630 aa27.35■■□□□ 1.97
RPAP3-204ENST00000547706 BICRAQ9NZM4 1560 aa27.31■■□□□ 1.96
RPAP3-204ENST00000547706 SHROOM4Q9ULL8 1493 aa27.21■■□□□ 1.95
RPAP3-204ENST00000547706 PABPN1Q86U42 306 aaKnown RBP eCLIP27.19■■□□□ 1.94
RPAP3-204ENST00000547706 EIF4G1Q04637 1599 aaKnown RBP26.58■■□□□ 1.85
RPAP3-204ENST00000547706 DNAJC5BQ9UF47 199 aa26.5■■□□□ 1.83
RPAP3-204ENST00000547706 CC2D2AQ9P2K1 1620 aa26.42■■□□□ 1.82
RPAP3-204ENST00000547706 BAZ1AQ9NRL2 1556 aaPredicted RBP26.3■■□□□ 1.8
RPAP3-204ENST00000547706 CECR2Q9BXF3 1484 aa26.3■■□□□ 1.8
RPAP3-204ENST00000547706 SMARCA4P51532 1647 aa26.26■■□□□ 1.79
RPAP3-204ENST00000547706 SMARCA2P51531 1590 aa26.11■■□□□ 1.77
RPAP3-204ENST00000547706 PEG3Q9GZU2 1588 aa26.07■■□□□ 1.76
RPAP3-204ENST00000547706 MROH2BQ7Z745 1585 aa26.07■■□□□ 1.76
RPAP3-204ENST00000547706 NCAPD3P42695 1498 aa26.06■■□□□ 1.76
RPAP3-204ENST00000547706 ATAD2BQ9ULI0 1458 aa26.06■■□□□ 1.76
RPAP3-204ENST00000547706 HMGXB3Q12766 1538 aa25.97■■□□□ 1.75
RPAP3-204ENST00000547706 RSF1Q96T23 1441 aaPredicted RBP25.87■■□□□ 1.73
RPAP3-204ENST00000547706 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
RPAP3-204ENST00000547706 WIZO95785 1651 aa25.8■■□□□ 1.72
RPAP3-204ENST00000547706 TOP2AP11388 1531 aaKnown RBP25.6■■□□□ 1.69
RPAP3-204ENST00000547706 LAMC3Q9Y6N6 1575 aa25.36■■□□□ 1.65
RPAP3-204ENST00000547706 CADPSQ9ULU8 1353 aa25.3■■□□□ 1.64
RPAP3-204ENST00000547706 SUPT5HO00267 1087 aaKnown RBP25.27■■□□□ 1.64
RPAP3-204ENST00000547706 CCDC88BA6NC98 1476 aa25.26■■□□□ 1.63
RPAP3-204ENST00000547706 NESP48681 1621 aa25.23■■□□□ 1.63
RPAP3-204ENST00000547706 CFTRP13569 1480 aa25.19■■□□□ 1.62
RPAP3-204ENST00000547706 PDS5BQ9NTI5 1447 aa25.18■■□□□ 1.62
RPAP3-204ENST00000547706 ERCC6Q03468 1493 aa25.14■■□□□ 1.61
RPAP3-204ENST00000547706 PRDM2Q13029 1718 aa25.1■■□□□ 1.61
RPAP3-204ENST00000547706 KIF21AQ7Z4S6 1674 aa25.02■■□□□ 1.6
RPAP3-204ENST00000547706 FANCD2Q9BXW9 1451 aa24.97■■□□□ 1.59
RPAP3-204ENST00000547706 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
RPAP3-204ENST00000547706 THOC2Q8NI27 1593 aaKnown RBP24.9■■□□□ 1.58
RPAP3-204ENST00000547706 CUX2O14529 1486 aa24.89■■□□□ 1.57
RPAP3-204ENST00000547706 MRC2Q9UBG0 1479 aa24.86■■□□□ 1.57
RPAP3-204ENST00000547706 WDR62O43379 1518 aa24.78■■□□□ 1.56
RPAP3-204ENST00000547706 ABCC8Q09428 1581 aa24.73■■□□□ 1.55
RPAP3-204ENST00000547706 URB2Q14146 1524 aaKnown RBP24.68■■□□□ 1.54
RPAP3-204ENST00000547706 DNMBPQ6XZF7 1577 aa24.62■■□□□ 1.53
RPAP3-204ENST00000547706 TOPBP1Q92547 1522 aa24.6■■□□□ 1.53
RPAP3-204ENST00000547706 CUX1P39880 1505 aa24.45■■□□□ 1.51
RPAP3-204ENST00000547706 IFT140Q96RY7 1462 aa24.43■■□□□ 1.5
RPAP3-204ENST00000547706 WRNQ14191 1432 aaPredicted RBP eCLIP24.41■■□□□ 1.5
RPAP3-204ENST00000547706 POLA1P09884 1462 aaPredicted RBP24.39■■□□□ 1.5
RPAP3-204ENST00000547706 BIVM-ERCC5R4GMW8 1640 aa24.37■■□□□ 1.49
RPAP3-204ENST00000547706 TOP2BQ02880 1626 aa24.36■■□□□ 1.49
RPAP3-204ENST00000547706 FGD5Q6ZNL6 1462 aa24.35■■□□□ 1.49
RPAP3-204ENST00000547706 TARBP1Q13395 1621 aaKnown RBP24.32■■□□□ 1.48
RPAP3-204ENST00000547706 SOGA1O94964 1423 aa24.31■■□□□ 1.48
RPAP3-204ENST00000547706 SYNJ1O43426 1573 aa24.29■■□□□ 1.48
RPAP3-204ENST00000547706 WDR97A6NE52 1622 aa24.28■■□□□ 1.48
RPAP3-204ENST00000547706 RAD54L2Q9Y4B4 1467 aa24.22■■□□□ 1.47
RPAP3-204ENST00000547706 ZNF608Q9ULD9 1512 aaPredicted RBP24.2■■□□□ 1.46
RPAP3-204ENST00000547706 ABCA10Q8WWZ4 1543 aa24.19■■□□□ 1.46
RPAP3-204ENST00000547706 EIF4G3O43432 1585 aaKnown RBP24.16■■□□□ 1.46
RPAP3-204ENST00000547706 AQRO60306 1485 aaKnown RBP eCLIP24.1■■□□□ 1.455e-6■■■■□ 22
RPAP3-204ENST00000547706 TDRD9Q8NDG6 1382 aaKnown RBP24.08■■□□□ 1.45
RPAP3-204ENST00000547706 ABCA5Q8WWZ7 1642 aa24.06■■□□□ 1.44
RPAP3-204ENST00000547706 GAPVD1Q14C86 1478 aa24.04■■□□□ 1.44
RPAP3-204ENST00000547706 GRIN2BQ13224 1484 aa24.03■■□□□ 1.44
RPAP3-204ENST00000547706 PBRM1Q86U86 1689 aa23.99■■□□□ 1.43
RPAP3-204ENST00000547706 MAGI1Q96QZ7 1491 aaPredicted RBP23.97■■□□□ 1.43
RPAP3-204ENST00000547706 TRIM41Q8WV44 630 aa23.94■■□□□ 1.42
RPAP3-204ENST00000547706 ERICH3Q5RHP9 1530 aa23.93■■□□□ 1.42
RPAP3-204ENST00000547706 KIF27Q86VH2 1401 aa23.91■■□□□ 1.42
RPAP3-204ENST00000547706 SNAPC4Q5SXM2 1469 aa23.9■■□□□ 1.42
RPAP3-204ENST00000547706 OSCARQ8IYS5 282 aa23.85■■□□□ 1.41
RPAP3-204ENST00000547706 SYNJ2O15056 1496 aa23.85■■□□□ 1.41
RPAP3-204ENST00000547706 CHD1O14646 1710 aa23.84■■□□□ 1.41
RPAP3-204ENST00000547706 DNAJC5Q9H3Z4 198 aa23.83■■□□□ 1.41
RPAP3-204ENST00000547706 FHAD1B1AJZ9 1412 aa23.79■■□□□ 1.4
RPAP3-204ENST00000547706 CHMP7Q8WUX9 453 aaPredicted RBP23.79■■□□□ 1.4
RPAP3-204ENST00000547706 ADAMTS12P58397 1594 aa23.78■■□□□ 1.4
RPAP3-204ENST00000547706 CUL7Q14999 1698 aa23.76■■□□□ 1.39
RPAP3-204ENST00000547706 IGF1RP08069 1367 aa23.76■■□□□ 1.39
RPAP3-204ENST00000547706 FBLN2P98095 1184 aa23.75■■□□□ 1.39
RPAP3-204ENST00000547706 CHIC1Q5VXU3 224 aa23.75■■□□□ 1.39
RPAP3-204ENST00000547706 GRIN2AQ12879 1464 aa23.69■■□□□ 1.38
RPAP3-204ENST00000547706 EEA1Q15075 1411 aa23.66■■□□□ 1.38
RPAP3-204ENST00000547706 CARMIL1Q5VZK9 1371 aa23.63■■□□□ 1.37
RPAP3-204ENST00000547706 RUSC2Q8N2Y8 1516 aa23.62■■□□□ 1.37
RPAP3-204ENST00000547706 NUP160Q12769 1436 aa23.6■■□□□ 1.37
RPAP3-204ENST00000547706 CLASP1Q7Z460 1538 aa23.59■■□□□ 1.37
RPAP3-204ENST00000547706 CEP170Q5SW79 1584 aa23.53■■□□□ 1.36
RPAP3-204ENST00000547706 RAPGEF2Q9Y4G8 1499 aa23.53■■□□□ 1.36
RPAP3-204ENST00000547706 CSRNP3Q8WYN3 585 aa23.5■■□□□ 1.35
RPAP3-204ENST00000547706 PRXQ9BXM0 1461 aa23.49■■□□□ 1.35
RPAP3-204ENST00000547706 KIAA0586Q9BVV6 1533 aa23.44■■□□□ 1.34
RPAP3-204ENST00000547706 ARHGEF11O15085 1522 aa23.43■■□□□ 1.34
RPAP3-204ENST00000547706 SHROOM2Q13796 1616 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms