RNA–Protein interactions for RNA: ENST00000547581.5

PFKM-209, Transcript of phosphofructokinase, muscle, humanhuman

TSL 2

Gene PFKM, Length 3,579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-209ENST00000547581 NISCHQ9Y2I1 1504 aa18.3■□□□□ 0.52
PFKM-209ENST00000547581 CCDC180Q9P1Z9 1646 aa16.48■□□□□ 0.23
PFKM-209ENST00000547581 MYO15BQ96JP2 1530 aa15.49■□□□□ 0.07
PFKM-209ENST00000547581 DCAF1Q9Y4B6 1507 aa15.45■□□□□ 0.06
PFKM-209ENST00000547581 ZCCHC6Q5VYS8 1495 aaKnown RBP15.37■□□□□ 0.05
PFKM-209ENST00000547581 NACADO15069 1562 aa15.26■□□□□ 0.03
PFKM-209ENST00000547581 ABCC9O60706 1549 aa15.26■□□□□ 0.03
PFKM-209ENST00000547581 RB1CC1Q8TDY2 1594 aa15.13■□□□□ 0.01
PFKM-209ENST00000547581 UNC13AQ9UPW8 1703 aa15.05■□□□□ 0
PFKM-209ENST00000547581 SHROOM4Q9ULL8 1493 aa14.85□□□□□ -0.03
PFKM-209ENST00000547581 BICRAQ9NZM4 1560 aa14.83□□□□□ -0.04
PFKM-209ENST00000547581 SCRIBQ14160 1630 aa14.58□□□□□ -0.08
PFKM-209ENST00000547581 SUPT5HO00267 1087 aaKnown RBP14.47□□□□□ -0.09
PFKM-209ENST00000547581 PEG3Q9GZU2 1588 aa14.3□□□□□ -0.12
PFKM-209ENST00000547581 EIF4G1Q04637 1599 aaKnown RBP14.26□□□□□ -0.13
PFKM-209ENST00000547581 DCAF8L2P0C7V8 631 aa14.23□□□□□ -0.13
PFKM-209ENST00000547581 CHIC1Q5VXU3 224 aa14.21□□□□□ -0.13
PFKM-209ENST00000547581 SMARCA4P51532 1647 aa14.2□□□□□ -0.14
PFKM-209ENST00000547581 BAZ1AQ9NRL2 1556 aaPredicted RBP14.15□□□□□ -0.14
PFKM-209ENST00000547581 CC2D2AQ9P2K1 1620 aa14.12□□□□□ -0.15
PFKM-209ENST00000547581 HRCP23327 699 aa14.11□□□□□ -0.15
PFKM-209ENST00000547581 HMGXB3Q12766 1538 aa14.08□□□□□ -0.16
PFKM-209ENST00000547581 PABPN1Q86U42 306 aaKnown RBP eCLIP14.06□□□□□ -0.16
PFKM-209ENST00000547581 CECR2Q9BXF3 1484 aa14.05□□□□□ -0.16
PFKM-209ENST00000547581 SMARCA2P51531 1590 aa14.04□□□□□ -0.16
PFKM-209ENST00000547581 NCAPD3P42695 1498 aa14.02□□□□□ -0.16
PFKM-209ENST00000547581 MROH2BQ7Z745 1585 aa14.01□□□□□ -0.17
PFKM-209ENST00000547581 ATAD2BQ9ULI0 1458 aa13.97□□□□□ -0.17
PFKM-209ENST00000547581 WIZO95785 1651 aa13.89□□□□□ -0.19
PFKM-209ENST00000547581 RSF1Q96T23 1441 aaPredicted RBP13.89□□□□□ -0.19
PFKM-209ENST00000547581 TOP2AP11388 1531 aaKnown RBP13.86□□□□□ -0.19
PFKM-209ENST00000547581 DNAJC5BQ9UF47 199 aa13.86□□□□□ -0.19
PFKM-209ENST00000547581 PRDM2Q13029 1718 aa13.81□□□□□ -0.2
PFKM-209ENST00000547581 PCGF6Q9BYE7 350 aa13.77□□□□□ -0.21
PFKM-209ENST00000547581 BAZ1BQ9UIG0 1483 aaKnown RBP13.73□□□□□ -0.21
PFKM-209ENST00000547581 TRIM26Q12899 539 aaPredicted RBP13.68□□□□□ -0.22
PFKM-209ENST00000547581 LAMC3Q9Y6N6 1575 aa13.66□□□□□ -0.22
PFKM-209ENST00000547581 LOC105371045A0A1W2PR82 267 aa13.64□□□□□ -0.23
PFKM-209ENST00000547581 TRIM41Q8WV44 630 aa13.62□□□□□ -0.23
PFKM-209ENST00000547581 ZEB1P37275 1124 aaPredicted RBP13.6□□□□□ -0.23
PFKM-209ENST00000547581 CFTRP13569 1480 aa13.55□□□□□ -0.24
PFKM-209ENST00000547581 PPARGC1BQ86YN6 1023 aaKnown RBP13.55□□□□□ -0.24
PFKM-209ENST00000547581 CCDC88BA6NC98 1476 aa13.53□□□□□ -0.24
PFKM-209ENST00000547581 THOC2Q8NI27 1593 aaKnown RBP13.5□□□□□ -0.25
PFKM-209ENST00000547581 KIF21AQ7Z4S6 1674 aa13.48□□□□□ -0.25
PFKM-209ENST00000547581 CADPSQ9ULU8 1353 aa13.43□□□□□ -0.26
PFKM-209ENST00000547581 WDR62O43379 1518 aa13.39□□□□□ -0.27
PFKM-209ENST00000547581 NESP48681 1621 aa13.37□□□□□ -0.27
PFKM-209ENST00000547581 BIVM-ERCC5R4GMW8 1640 aa13.33□□□□□ -0.28
PFKM-209ENST00000547581 FAM9AQ8IZU1 332 aaPredicted RBP13.31□□□□□ -0.28
PFKM-209ENST00000547581 WDR97A6NE52 1622 aa13.3□□□□□ -0.28
PFKM-209ENST00000547581 PDS5BQ9NTI5 1447 aa13.29□□□□□ -0.28
PFKM-209ENST00000547581 CUX2O14529 1486 aa13.28□□□□□ -0.28
PFKM-209ENST00000547581 FANCD2Q9BXW9 1451 aa13.27□□□□□ -0.29
PFKM-209ENST00000547581 DNMBPQ6XZF7 1577 aa13.26□□□□□ -0.29
PFKM-209ENST00000547581 MRC2Q9UBG0 1479 aa13.26□□□□□ -0.29
PFKM-209ENST00000547581 PELP1Q8IZL8 1130 aaKnown RBP13.24□□□□□ -0.29
PFKM-209ENST00000547581 EEA1Q15075 1411 aa13.23□□□□□ -0.29
PFKM-209ENST00000547581 URB2Q14146 1524 aaKnown RBP13.23□□□□□ -0.29
PFKM-209ENST00000547581 ABCC8Q09428 1581 aa13.23□□□□□ -0.29
PFKM-209ENST00000547581 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
PFKM-209ENST00000547581 TOP2BQ02880 1626 aa13.21□□□□□ -0.29
PFKM-209ENST00000547581 TARBP1Q13395 1621 aaKnown RBP13.21□□□□□ -0.3
PFKM-209ENST00000547581 WRNQ14191 1432 aaPredicted RBP eCLIP13.19□□□□□ -0.3
PFKM-209ENST00000547581 CUX1P39880 1505 aa13.17□□□□□ -0.3
PFKM-209ENST00000547581 TOPBP1Q92547 1522 aa13.16□□□□□ -0.3
PFKM-209ENST00000547581 SCAF1Q9H7N4 1312 aaKnown RBP13.14□□□□□ -0.31
PFKM-209ENST00000547581 TNIKQ9UKE5 1360 aa13.12□□□□□ -0.31
PFKM-209ENST00000547581 SYNJ1O43426 1573 aa13.12□□□□□ -0.31
PFKM-209ENST00000547581 ABCA5Q8WWZ7 1642 aa13.09□□□□□ -0.31
PFKM-209ENST00000547581 ERCC6Q03468 1493 aa13.06□□□□□ -0.32
PFKM-209ENST00000547581 CSRNP3Q8WYN3 585 aa13.05□□□□□ -0.32
PFKM-209ENST00000547581 EHMT2Q96KQ7 1210 aa13.05□□□□□ -0.32
PFKM-209ENST00000547581 CEP162Q5TB80 1403 aa13.04□□□□□ -0.32
PFKM-209ENST00000547581 POLA1P09884 1462 aaPredicted RBP13.03□□□□□ -0.32
PFKM-209ENST00000547581 IFT140Q96RY7 1462 aa13.03□□□□□ -0.32
PFKM-209ENST00000547581 CCER1Q8TC90 406 aaPredicted RBP13.03□□□□□ -0.32
PFKM-209ENST00000547581 ABCA10Q8WWZ4 1543 aa13.02□□□□□ -0.32
PFKM-209ENST00000547581 GOLGA3Q08378 1498 aa13.02□□□□□ -0.33
PFKM-209ENST00000547581 PBRM1Q86U86 1689 aa13□□□□□ -0.33
PFKM-209ENST00000547581 EIF4G3O43432 1585 aaKnown RBP12.99□□□□□ -0.33
PFKM-209ENST00000547581 FGD5Q6ZNL6 1462 aa12.98□□□□□ -0.33
PFKM-209ENST00000547581 SOGA1O94964 1423 aa12.97□□□□□ -0.33
PFKM-209ENST00000547581 UBTFP17480 764 aaKnown RBP12.95□□□□□ -0.34
PFKM-209ENST00000547581 KIF21BO75037 1637 aa12.93□□□□□ -0.34
PFKM-209ENST00000547581 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
PFKM-209ENST00000547581 ERICH3Q5RHP9 1530 aa12.9□□□□□ -0.34
PFKM-209ENST00000547581 ACIN1Q9UKV3 1341 aaKnown RBP12.89□□□□□ -0.35
PFKM-209ENST00000547581 CUL7Q14999 1698 aa12.86□□□□□ -0.35
PFKM-209ENST00000547581 ADAMTS12P58397 1594 aa12.86□□□□□ -0.35
PFKM-209ENST00000547581 ZNF608Q9ULD9 1512 aaPredicted RBP12.85□□□□□ -0.35
PFKM-209ENST00000547581 SLC24A1O60721 1099 aa12.84□□□□□ -0.35
PFKM-209ENST00000547581 CENPBP07199 599 aaPredicted RBP12.84□□□□□ -0.35
PFKM-209ENST00000547581 RUSC2Q8N2Y8 1516 aa12.84□□□□□ -0.35
PFKM-209ENST00000547581 RAD54L2Q9Y4B4 1467 aa12.83□□□□□ -0.36
PFKM-209ENST00000547581 APLP2Q06481 763 aa12.82□□□□□ -0.36
PFKM-209ENST00000547581 MAGI1Q96QZ7 1491 aaPredicted RBP12.82□□□□□ -0.36
PFKM-209ENST00000547581 CLIP1P30622 1438 aa12.82□□□□□ -0.36
PFKM-209ENST00000547581 CHD1O14646 1710 aa12.81□□□□□ -0.36
PFKM-209ENST00000547581 DIEXFQ68CQ4 756 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms