RNA–Protein interactions for RNA: ENST00000547557.1

CSRP2-204, Transcript of cysteine and glycine rich protein 2, humanhuman

TSL 2

Gene CSRP2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP2-204ENST00000547557 NISCHQ9Y2I1 1504 aa39.04■■■■□ 3.84
CSRP2-204ENST00000547557 CCDC180Q9P1Z9 1646 aa34.62■■■■□ 3.13
CSRP2-204ENST00000547557 ABCC9O60706 1549 aa33.63■■■□□ 2.97
CSRP2-204ENST00000547557 ZCCHC6Q5VYS8 1495 aaKnown RBP32.57■■■□□ 2.8
CSRP2-204ENST00000547557 DCAF8L2P0C7V8 631 aa32.54■■■□□ 2.8
CSRP2-204ENST00000547557 NACADO15069 1562 aa32.43■■■□□ 2.78
CSRP2-204ENST00000547557 RB1CC1Q8TDY2 1594 aa32.41■■■□□ 2.78
CSRP2-204ENST00000547557 MYO15BQ96JP2 1530 aa32.26■■■□□ 2.76
CSRP2-204ENST00000547557 DCAF1Q9Y4B6 1507 aa32.26■■■□□ 2.76
CSRP2-204ENST00000547557 UNC13AQ9UPW8 1703 aa31.91■■■□□ 2.7
CSRP2-204ENST00000547557 SCRIBQ14160 1630 aa31.65■■■□□ 2.66
CSRP2-204ENST00000547557 BICRAQ9NZM4 1560 aa31.51■■■□□ 2.63
CSRP2-204ENST00000547557 PABPN1Q86U42 306 aaKnown RBP eCLIP31.47■■■□□ 2.63
CSRP2-204ENST00000547557 SHROOM4Q9ULL8 1493 aa31.08■■■□□ 2.57
CSRP2-204ENST00000547557 DNAJC5BQ9UF47 199 aa30.66■■■□□ 2.5
CSRP2-204ENST00000547557 EIF4G1Q04637 1599 aaKnown RBP30.6■■■□□ 2.49
CSRP2-204ENST00000547557 CC2D2AQ9P2K1 1620 aa30.45■■■□□ 2.47
CSRP2-204ENST00000547557 CECR2Q9BXF3 1484 aa30.44■■■□□ 2.46
CSRP2-204ENST00000547557 SMARCA4P51532 1647 aa30.28■■■□□ 2.44
CSRP2-204ENST00000547557 BAZ1AQ9NRL2 1556 aaPredicted RBP30.22■■■□□ 2.43
CSRP2-204ENST00000547557 MROH2BQ7Z745 1585 aa30.14■■■□□ 2.42
CSRP2-204ENST00000547557 ATAD2BQ9ULI0 1458 aa29.99■■■□□ 2.39
CSRP2-204ENST00000547557 SMARCA2P51531 1590 aa29.94■■■□□ 2.38
CSRP2-204ENST00000547557 PEG3Q9GZU2 1588 aa29.93■■■□□ 2.38
CSRP2-204ENST00000547557 NCAPD3P42695 1498 aa29.91■■■□□ 2.38
CSRP2-204ENST00000547557 WIZO95785 1651 aa29.9■■■□□ 2.38
CSRP2-204ENST00000547557 RSF1Q96T23 1441 aaPredicted RBP29.85■■■□□ 2.37
CSRP2-204ENST00000547557 HMGXB3Q12766 1538 aa29.8■■■□□ 2.36
CSRP2-204ENST00000547557 BAZ1BQ9UIG0 1483 aaKnown RBP29.75■■■□□ 2.35
CSRP2-204ENST00000547557 TOP2AP11388 1531 aaKnown RBP29.49■■■□□ 2.31
CSRP2-204ENST00000547557 SUPT5HO00267 1087 aaKnown RBP29.34■■■□□ 2.29
CSRP2-204ENST00000547557 NESP48681 1621 aa29.21■■■□□ 2.27
CSRP2-204ENST00000547557 CCDC88BA6NC98 1476 aa29.17■■■□□ 2.26
CSRP2-204ENST00000547557 LAMC3Q9Y6N6 1575 aa29.1■■■□□ 2.25
CSRP2-204ENST00000547557 CADPSQ9ULU8 1353 aa29.05■■■□□ 2.24
CSRP2-204ENST00000547557 KIF21AQ7Z4S6 1674 aa28.94■■■□□ 2.22
CSRP2-204ENST00000547557 CFTRP13569 1480 aa28.94■■■□□ 2.22
CSRP2-204ENST00000547557 PRDM2Q13029 1718 aa28.91■■■□□ 2.22
CSRP2-204ENST00000547557 ERCC6Q03468 1493 aa28.9■■■□□ 2.22
CSRP2-204ENST00000547557 PDS5BQ9NTI5 1447 aa28.84■■■□□ 2.21
CSRP2-204ENST00000547557 FANCD2Q9BXW9 1451 aa28.74■■■□□ 2.19
CSRP2-204ENST00000547557 THOC2Q8NI27 1593 aaKnown RBP28.69■■■□□ 2.18
CSRP2-204ENST00000547557 CEP164Q9UPV0 1460 aa28.66■■■□□ 2.18
CSRP2-204ENST00000547557 MRC2Q9UBG0 1479 aa28.57■■■□□ 2.16
CSRP2-204ENST00000547557 WDR62O43379 1518 aa28.48■■■□□ 2.15
CSRP2-204ENST00000547557 URB2Q14146 1524 aaKnown RBP28.48■■■□□ 2.15
CSRP2-204ENST00000547557 CUX2O14529 1486 aa28.46■■■□□ 2.15
CSRP2-204ENST00000547557 TOPBP1Q92547 1522 aa28.33■■■□□ 2.13
CSRP2-204ENST00000547557 DNMBPQ6XZF7 1577 aa28.32■■■□□ 2.12
CSRP2-204ENST00000547557 ABCC8Q09428 1581 aa28.27■■■□□ 2.12
CSRP2-204ENST00000547557 CUX1P39880 1505 aa28.25■■■□□ 2.11
CSRP2-204ENST00000547557 SYNJ1O43426 1573 aa28.12■■■□□ 2.09
CSRP2-204ENST00000547557 WRNQ14191 1432 aaPredicted RBP eCLIP28.11■■■□□ 2.09
CSRP2-204ENST00000547557 POLA1P09884 1462 aaPredicted RBP28.1■■■□□ 2.09
CSRP2-204ENST00000547557 FGD5Q6ZNL6 1462 aa28.09■■■□□ 2.09
CSRP2-204ENST00000547557 BIVM-ERCC5R4GMW8 1640 aa28.09■■■□□ 2.09
CSRP2-204ENST00000547557 TOP2BQ02880 1626 aa28.07■■■□□ 2.08
CSRP2-204ENST00000547557 TARBP1Q13395 1621 aaKnown RBP28.05■■■□□ 2.08
CSRP2-204ENST00000547557 IFT140Q96RY7 1462 aa28.03■■■□□ 2.08
CSRP2-204ENST00000547557 RAD54L2Q9Y4B4 1467 aa28.02■■■□□ 2.08
CSRP2-204ENST00000547557 SOGA1O94964 1423 aa27.98■■■□□ 2.07
CSRP2-204ENST00000547557 ZNF608Q9ULD9 1512 aaPredicted RBP27.97■■■□□ 2.07
CSRP2-204ENST00000547557 WDR97A6NE52 1622 aa27.92■■■□□ 2.06
CSRP2-204ENST00000547557 EIF4G3O43432 1585 aaKnown RBP27.87■■■□□ 2.05
CSRP2-204ENST00000547557 AQRO60306 1485 aaKnown RBP eCLIP27.83■■■□□ 2.05
CSRP2-204ENST00000547557 TDRD9Q8NDG6 1382 aaKnown RBP27.82■■■□□ 2.04
CSRP2-204ENST00000547557 ABCA10Q8WWZ4 1543 aa27.8■■■□□ 2.04
CSRP2-204ENST00000547557 ABCA5Q8WWZ7 1642 aa27.72■■■□□ 2.03
CSRP2-204ENST00000547557 PBRM1Q86U86 1689 aa27.71■■■□□ 2.03
CSRP2-204ENST00000547557 GAPVD1Q14C86 1478 aa27.66■■■□□ 2.02
CSRP2-204ENST00000547557 TRIM41Q8WV44 630 aa27.64■■■□□ 2.02
CSRP2-204ENST00000547557 GRIN2BQ13224 1484 aa27.6■■■□□ 2.01
CSRP2-204ENST00000547557 CHD1O14646 1710 aa27.56■■■□□ 2
CSRP2-204ENST00000547557 SNAPC4Q5SXM2 1469 aa27.56■■■□□ 2
CSRP2-204ENST00000547557 CHIC1Q5VXU3 224 aa27.54■■■□□ 2
CSRP2-204ENST00000547557 MAGI1Q96QZ7 1491 aaPredicted RBP27.49■■□□□ 1.99
CSRP2-204ENST00000547557 KIF27Q86VH2 1401 aa27.48■■□□□ 1.99
CSRP2-204ENST00000547557 ERICH3Q5RHP9 1530 aa27.46■■□□□ 1.99
CSRP2-204ENST00000547557 RUSC2Q8N2Y8 1516 aa27.46■■□□□ 1.99
CSRP2-204ENST00000547557 FBLN2P98095 1184 aa27.42■■□□□ 1.98
CSRP2-204ENST00000547557 ADAMTS12P58397 1594 aa27.42■■□□□ 1.98
CSRP2-204ENST00000547557 SYNJ2O15056 1496 aa27.39■■□□□ 1.98
CSRP2-204ENST00000547557 IGF1RP08069 1367 aa27.37■■□□□ 1.97
CSRP2-204ENST00000547557 CHMP7Q8WUX9 453 aaPredicted RBP27.36■■□□□ 1.97
CSRP2-204ENST00000547557 OSCARQ8IYS5 282 aa27.35■■□□□ 1.97
CSRP2-204ENST00000547557 FHAD1B1AJZ9 1412 aa27.33■■□□□ 1.96
CSRP2-204ENST00000547557 DNAJC5Q9H3Z4 198 aa27.31■■□□□ 1.96
CSRP2-204ENST00000547557 CUL7Q14999 1698 aa27.3■■□□□ 1.96
CSRP2-204ENST00000547557 GRIN2AQ12879 1464 aa27.27■■□□□ 1.96
CSRP2-204ENST00000547557 CARMIL1Q5VZK9 1371 aa27.21■■□□□ 1.95
CSRP2-204ENST00000547557 CEP170Q5SW79 1584 aa27.18■■□□□ 1.94
CSRP2-204ENST00000547557 CLASP1Q7Z460 1538 aa27.16■■□□□ 1.94
CSRP2-204ENST00000547557 FAM9AQ8IZU1 332 aaPredicted RBP27.14■■□□□ 1.94
CSRP2-204ENST00000547557 NUP160Q12769 1436 aa27.12■■□□□ 1.93
CSRP2-204ENST00000547557 EEA1Q15075 1411 aa27.09■■□□□ 1.93
CSRP2-204ENST00000547557 CSRNP3Q8WYN3 585 aa27.09■■□□□ 1.93
CSRP2-204ENST00000547557 RAPGEF2Q9Y4G8 1499 aa27.07■■□□□ 1.92
CSRP2-204ENST00000547557 PRXQ9BXM0 1461 aa27.05■■□□□ 1.92
CSRP2-204ENST00000547557 RIMBP3CA6NJZ7 1639 aa26.98■■□□□ 1.91
CSRP2-204ENST00000547557 RIMBP3BA6NNM3 1639 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms