RNA–Protein interactions for RNA: ENST00000547378.1

AL139353.1-202, humanhuman

APPRIS P1 TSL 3 BASIC

Gene AL139353.1, Length 474 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139353.1-202ENST00000547378 NISCHQ9Y2I1 1504 aa30.66■■■□□ 2.5
AL139353.1-202ENST00000547378 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
AL139353.1-202ENST00000547378 ABCC9O60706 1549 aa25.85■■□□□ 1.73
AL139353.1-202ENST00000547378 ZCCHC6Q5VYS8 1495 aaKnown RBP25.66■■□□□ 1.7
AL139353.1-202ENST00000547378 DCAF1Q9Y4B6 1507 aa25.51■■□□□ 1.67
AL139353.1-202ENST00000547378 MYO15BQ96JP2 1530 aa25.47■■□□□ 1.67
AL139353.1-202ENST00000547378 NACADO15069 1562 aa25.35■■□□□ 1.65
AL139353.1-202ENST00000547378 RB1CC1Q8TDY2 1594 aa25.22■■□□□ 1.63
AL139353.1-202ENST00000547378 DCAF8L2P0C7V8 631 aa25.15■■□□□ 1.62
AL139353.1-202ENST00000547378 SCRIBQ14160 1630 aa24.58■■□□□ 1.53
AL139353.1-202ENST00000547378 UNC13AQ9UPW8 1703 aa24.55■■□□□ 1.52
AL139353.1-202ENST00000547378 BICRAQ9NZM4 1560 aa24.42■■□□□ 1.5
AL139353.1-202ENST00000547378 SHROOM4Q9ULL8 1493 aa24.38■■□□□ 1.49
AL139353.1-202ENST00000547378 PABPN1Q86U42 306 aaKnown RBP eCLIP24.2■■□□□ 1.46
AL139353.1-202ENST00000547378 CECR2Q9BXF3 1484 aa23.74■■□□□ 1.39
AL139353.1-202ENST00000547378 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
AL139353.1-202ENST00000547378 EIF4G1Q04637 1599 aaKnown RBP23.73■■□□□ 1.39
AL139353.1-202ENST00000547378 SMARCA4P51532 1647 aa23.66■■□□□ 1.38
AL139353.1-202ENST00000547378 MROH2BQ7Z745 1585 aa23.57■■□□□ 1.36
AL139353.1-202ENST00000547378 PEG3Q9GZU2 1588 aa23.52■■□□□ 1.36
AL139353.1-202ENST00000547378 RSF1Q96T23 1441 aaPredicted RBP23.52■■□□□ 1.36
AL139353.1-202ENST00000547378 CC2D2AQ9P2K1 1620 aa23.47■■□□□ 1.35
AL139353.1-202ENST00000547378 SMARCA2P51531 1590 aa23.45■■□□□ 1.34
AL139353.1-202ENST00000547378 ATAD2BQ9ULI0 1458 aa23.43■■□□□ 1.34
AL139353.1-202ENST00000547378 NCAPD3P42695 1498 aa23.4■■□□□ 1.34
AL139353.1-202ENST00000547378 HMGXB3Q12766 1538 aa23.33■■□□□ 1.32
AL139353.1-202ENST00000547378 WIZO95785 1651 aa23.29■■□□□ 1.32
AL139353.1-202ENST00000547378 DNAJC5BQ9UF47 199 aa23.29■■□□□ 1.32
AL139353.1-202ENST00000547378 BAZ1BQ9UIG0 1483 aaKnown RBP23.23■■□□□ 1.31
AL139353.1-202ENST00000547378 TOP2AP11388 1531 aaKnown RBP23.18■■□□□ 1.3
AL139353.1-202ENST00000547378 SUPT5HO00267 1087 aaKnown RBP23.09■■□□□ 1.29
AL139353.1-202ENST00000547378 CCDC88BA6NC98 1476 aa22.86■■□□□ 1.25
AL139353.1-202ENST00000547378 CFTRP13569 1480 aa22.69■■□□□ 1.22
AL139353.1-202ENST00000547378 CADPSQ9ULU8 1353 aa22.69■■□□□ 1.22
AL139353.1-202ENST00000547378 LAMC3Q9Y6N6 1575 aa22.67■■□□□ 1.22
AL139353.1-202ENST00000547378 NESP48681 1621 aa22.52■■□□□ 1.2
AL139353.1-202ENST00000547378 PRDM2Q13029 1718 aa22.5■■□□□ 1.19
AL139353.1-202ENST00000547378 PDS5BQ9NTI5 1447 aa22.49■■□□□ 1.19
AL139353.1-202ENST00000547378 FANCD2Q9BXW9 1451 aa22.4■■□□□ 1.18
AL139353.1-202ENST00000547378 CEP164Q9UPV0 1460 aa22.33■■□□□ 1.16
AL139353.1-202ENST00000547378 ERCC6Q03468 1493 aa22.28■■□□□ 1.16
AL139353.1-202ENST00000547378 KIF21AQ7Z4S6 1674 aa22.27■■□□□ 1.16
AL139353.1-202ENST00000547378 ABCC8Q09428 1581 aa22.21■■□□□ 1.15
AL139353.1-202ENST00000547378 MRC2Q9UBG0 1479 aa22.21■■□□□ 1.15
AL139353.1-202ENST00000547378 THOC2Q8NI27 1593 aaKnown RBP22.16■■□□□ 1.14
AL139353.1-202ENST00000547378 WDR62O43379 1518 aa22.15■■□□□ 1.14
AL139353.1-202ENST00000547378 WRNQ14191 1432 aaPredicted RBP eCLIP22.14■■□□□ 1.149e-6■■■■■ 50.1
AL139353.1-202ENST00000547378 DNMBPQ6XZF7 1577 aa22.13■■□□□ 1.13
AL139353.1-202ENST00000547378 URB2Q14146 1524 aaKnown RBP22.13■■□□□ 1.13
AL139353.1-202ENST00000547378 CUX1P39880 1505 aa22.1■■□□□ 1.13
AL139353.1-202ENST00000547378 TOPBP1Q92547 1522 aa22.1■■□□□ 1.13
AL139353.1-202ENST00000547378 TOP2BQ02880 1626 aa22.07■■□□□ 1.12
AL139353.1-202ENST00000547378 BIVM-ERCC5R4GMW8 1640 aa22.06■■□□□ 1.12
AL139353.1-202ENST00000547378 SYNJ1O43426 1573 aa22.03■■□□□ 1.12
AL139353.1-202ENST00000547378 CUX2O14529 1486 aa21.99■■□□□ 1.11
AL139353.1-202ENST00000547378 CHIC1Q5VXU3 224 aa21.95■■□□□ 1.1
AL139353.1-202ENST00000547378 POLA1P09884 1462 aaPredicted RBP21.94■■□□□ 1.1
AL139353.1-202ENST00000547378 FGD5Q6ZNL6 1462 aa21.94■■□□□ 1.1
AL139353.1-202ENST00000547378 TRIM41Q8WV44 630 aa21.88■■□□□ 1.09
AL139353.1-202ENST00000547378 IFT140Q96RY7 1462 aa21.88■■□□□ 1.09
AL139353.1-202ENST00000547378 SOGA1O94964 1423 aa21.84■■□□□ 1.09
AL139353.1-202ENST00000547378 TARBP1Q13395 1621 aaKnown RBP21.84■■□□□ 1.09
AL139353.1-202ENST00000547378 ABCA10Q8WWZ4 1543 aa21.82■■□□□ 1.08
AL139353.1-202ENST00000547378 WDR97A6NE52 1622 aa21.8■■□□□ 1.08
AL139353.1-202ENST00000547378 RAD54L2Q9Y4B4 1467 aa21.77■■□□□ 1.07
AL139353.1-202ENST00000547378 KIF27Q86VH2 1401 aa21.67■■□□□ 1.06
AL139353.1-202ENST00000547378 ABCA5Q8WWZ7 1642 aa21.66■■□□□ 1.06
AL139353.1-202ENST00000547378 ZNF608Q9ULD9 1512 aaPredicted RBP21.65■■□□□ 1.06
AL139353.1-202ENST00000547378 EEA1Q15075 1411 aa21.64■■□□□ 1.06
AL139353.1-202ENST00000547378 GAPVD1Q14C86 1478 aa21.62■■□□□ 1.05
AL139353.1-202ENST00000547378 EIF4G3O43432 1585 aaKnown RBP21.61■■□□□ 1.05
AL139353.1-202ENST00000547378 TDRD9Q8NDG6 1382 aaKnown RBP21.61■■□□□ 1.05
AL139353.1-202ENST00000547378 ERICH3Q5RHP9 1530 aa21.58■■□□□ 1.04
AL139353.1-202ENST00000547378 AQRO60306 1485 aaKnown RBP eCLIP21.58■■□□□ 1.04
AL139353.1-202ENST00000547378 GRIN2BQ13224 1484 aa21.58■■□□□ 1.04
AL139353.1-202ENST00000547378 IGF1RP08069 1367 aa21.51■■□□□ 1.03
AL139353.1-202ENST00000547378 RUSC2Q8N2Y8 1516 aa21.5■■□□□ 1.03
AL139353.1-202ENST00000547378 MAGI1Q96QZ7 1491 aaPredicted RBP21.5■■□□□ 1.03
AL139353.1-202ENST00000547378 PBRM1Q86U86 1689 aa21.49■■□□□ 1.03
AL139353.1-202ENST00000547378 CUL7Q14999 1698 aa21.45■■□□□ 1.02
AL139353.1-202ENST00000547378 CSRNP3Q8WYN3 585 aa21.43■■□□□ 1.02
AL139353.1-202ENST00000547378 FHAD1B1AJZ9 1412 aa21.42■■□□□ 1.02
AL139353.1-202ENST00000547378 SNAPC4Q5SXM2 1469 aa21.41■■□□□ 1.02
AL139353.1-202ENST00000547378 ADAMTS12P58397 1594 aa21.4■■□□□ 1.02
AL139353.1-202ENST00000547378 PRXQ9BXM0 1461 aa21.4■■□□□ 1.02
AL139353.1-202ENST00000547378 SYNJ2O15056 1496 aa21.38■■□□□ 1.01
AL139353.1-202ENST00000547378 CARMIL1Q5VZK9 1371 aa21.37■■□□□ 1.01
AL139353.1-202ENST00000547378 KIF21BO75037 1637 aa21.33■■□□□ 1
AL139353.1-202ENST00000547378 RAPGEF2Q9Y4G8 1499 aa21.32■■□□□ 1
AL139353.1-202ENST00000547378 GRIN2AQ12879 1464 aa21.28■■□□□ 1
AL139353.1-202ENST00000547378 FAM9AQ8IZU1 332 aaPredicted RBP21.27■■□□□ 1
AL139353.1-202ENST00000547378 CHMP7Q8WUX9 453 aaPredicted RBP21.25■□□□□ 0.99
AL139353.1-202ENST00000547378 NUP160Q12769 1436 aa21.21■□□□□ 0.99
AL139353.1-202ENST00000547378 GOLGA3Q08378 1498 aa21.21■□□□□ 0.99
AL139353.1-202ENST00000547378 CHD1O14646 1710 aa21.19■□□□□ 0.98
AL139353.1-202ENST00000547378 FBLN2P98095 1184 aa21.13■□□□□ 0.97
AL139353.1-202ENST00000547378 CEP170Q5SW79 1584 aa21.12■□□□□ 0.97
AL139353.1-202ENST00000547378 KIAA0586Q9BVV6 1533 aa21.12■□□□□ 0.97
AL139353.1-202ENST00000547378 OSCARQ8IYS5 282 aa21.09■□□□□ 0.97
AL139353.1-202ENST00000547378 CLASP1Q7Z460 1538 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms