RNA–Protein interactions for RNA: ENST00000547378.1

AL139353.1-202, humanhuman

APPRIS P1 TSL 3 BASIC

Gene AL139353.1, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139353.1-202ENST00000547378 NISCHQ9Y2I1 1504 aa30.66■■■□□ 2.5
AL139353.1-202ENST00000547378 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
AL139353.1-202ENST00000547378 ABCC9O60706 1549 aa25.85■■□□□ 1.73
AL139353.1-202ENST00000547378 ZCCHC6Q5VYS8 1495 aaKnown RBP25.66■■□□□ 1.7
AL139353.1-202ENST00000547378 DCAF1Q9Y4B6 1507 aa25.51■■□□□ 1.67
AL139353.1-202ENST00000547378 MYO15BQ96JP2 1530 aa25.47■■□□□ 1.67
AL139353.1-202ENST00000547378 NACADO15069 1562 aa25.35■■□□□ 1.65
AL139353.1-202ENST00000547378 RB1CC1Q8TDY2 1594 aa25.22■■□□□ 1.63
AL139353.1-202ENST00000547378 DCAF8L2P0C7V8 631 aa25.15■■□□□ 1.62
AL139353.1-202ENST00000547378 SCRIBQ14160 1630 aa24.58■■□□□ 1.53
AL139353.1-202ENST00000547378 UNC13AQ9UPW8 1703 aa24.55■■□□□ 1.52
AL139353.1-202ENST00000547378 BICRAQ9NZM4 1560 aa24.42■■□□□ 1.5
AL139353.1-202ENST00000547378 SHROOM4Q9ULL8 1493 aa24.38■■□□□ 1.49
AL139353.1-202ENST00000547378 PABPN1Q86U42 306 aaKnown RBP eCLIP24.2■■□□□ 1.46
AL139353.1-202ENST00000547378 CECR2Q9BXF3 1484 aa23.74■■□□□ 1.39
AL139353.1-202ENST00000547378 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
AL139353.1-202ENST00000547378 EIF4G1Q04637 1599 aaKnown RBP23.73■■□□□ 1.39
AL139353.1-202ENST00000547378 SMARCA4P51532 1647 aa23.66■■□□□ 1.38
AL139353.1-202ENST00000547378 MROH2BQ7Z745 1585 aa23.57■■□□□ 1.36
AL139353.1-202ENST00000547378 PEG3Q9GZU2 1588 aa23.52■■□□□ 1.36
AL139353.1-202ENST00000547378 RSF1Q96T23 1441 aaPredicted RBP23.52■■□□□ 1.36
AL139353.1-202ENST00000547378 CC2D2AQ9P2K1 1620 aa23.47■■□□□ 1.35
AL139353.1-202ENST00000547378 SMARCA2P51531 1590 aa23.45■■□□□ 1.34
AL139353.1-202ENST00000547378 ATAD2BQ9ULI0 1458 aa23.43■■□□□ 1.34
AL139353.1-202ENST00000547378 NCAPD3P42695 1498 aa23.4■■□□□ 1.34
AL139353.1-202ENST00000547378 HMGXB3Q12766 1538 aa23.33■■□□□ 1.32
AL139353.1-202ENST00000547378 WIZO95785 1651 aa23.29■■□□□ 1.32
AL139353.1-202ENST00000547378 DNAJC5BQ9UF47 199 aa23.29■■□□□ 1.32
AL139353.1-202ENST00000547378 BAZ1BQ9UIG0 1483 aaKnown RBP23.23■■□□□ 1.31
AL139353.1-202ENST00000547378 TOP2AP11388 1531 aaKnown RBP23.18■■□□□ 1.3
AL139353.1-202ENST00000547378 SUPT5HO00267 1087 aaKnown RBP23.09■■□□□ 1.29
AL139353.1-202ENST00000547378 CCDC88BA6NC98 1476 aa22.86■■□□□ 1.25
AL139353.1-202ENST00000547378 CFTRP13569 1480 aa22.69■■□□□ 1.22
AL139353.1-202ENST00000547378 CADPSQ9ULU8 1353 aa22.69■■□□□ 1.22
AL139353.1-202ENST00000547378 LAMC3Q9Y6N6 1575 aa22.67■■□□□ 1.22
AL139353.1-202ENST00000547378 NESP48681 1621 aa22.52■■□□□ 1.2
AL139353.1-202ENST00000547378 PRDM2Q13029 1718 aa22.5■■□□□ 1.19
AL139353.1-202ENST00000547378 PDS5BQ9NTI5 1447 aa22.49■■□□□ 1.19
AL139353.1-202ENST00000547378 FANCD2Q9BXW9 1451 aa22.4■■□□□ 1.18
AL139353.1-202ENST00000547378 CEP164Q9UPV0 1460 aa22.33■■□□□ 1.16
AL139353.1-202ENST00000547378 ERCC6Q03468 1493 aa22.28■■□□□ 1.16
AL139353.1-202ENST00000547378 KIF21AQ7Z4S6 1674 aa22.27■■□□□ 1.16
AL139353.1-202ENST00000547378 ABCC8Q09428 1581 aa22.21■■□□□ 1.15
AL139353.1-202ENST00000547378 MRC2Q9UBG0 1479 aa22.21■■□□□ 1.15
AL139353.1-202ENST00000547378 THOC2Q8NI27 1593 aaKnown RBP22.16■■□□□ 1.14
AL139353.1-202ENST00000547378 WDR62O43379 1518 aa22.15■■□□□ 1.14
AL139353.1-202ENST00000547378 WRNQ14191 1432 aaPredicted RBP eCLIP22.14■■□□□ 1.149e-6■■■■■ 50.1
AL139353.1-202ENST00000547378 DNMBPQ6XZF7 1577 aa22.13■■□□□ 1.13
AL139353.1-202ENST00000547378 URB2Q14146 1524 aaKnown RBP22.13■■□□□ 1.13
AL139353.1-202ENST00000547378 CUX1P39880 1505 aa22.1■■□□□ 1.13
AL139353.1-202ENST00000547378 TOPBP1Q92547 1522 aa22.1■■□□□ 1.13
AL139353.1-202ENST00000547378 TOP2BQ02880 1626 aa22.07■■□□□ 1.12
AL139353.1-202ENST00000547378 BIVM-ERCC5R4GMW8 1640 aa22.06■■□□□ 1.12
AL139353.1-202ENST00000547378 SYNJ1O43426 1573 aa22.03■■□□□ 1.12
AL139353.1-202ENST00000547378 CUX2O14529 1486 aa21.99■■□□□ 1.11
AL139353.1-202ENST00000547378 CHIC1Q5VXU3 224 aa21.95■■□□□ 1.1
AL139353.1-202ENST00000547378 POLA1P09884 1462 aaPredicted RBP21.94■■□□□ 1.1
AL139353.1-202ENST00000547378 FGD5Q6ZNL6 1462 aa21.94■■□□□ 1.1
AL139353.1-202ENST00000547378 TRIM41Q8WV44 630 aa21.88■■□□□ 1.09
AL139353.1-202ENST00000547378 IFT140Q96RY7 1462 aa21.88■■□□□ 1.09
AL139353.1-202ENST00000547378 SOGA1O94964 1423 aa21.84■■□□□ 1.09
AL139353.1-202ENST00000547378 TARBP1Q13395 1621 aaKnown RBP21.84■■□□□ 1.09
AL139353.1-202ENST00000547378 ABCA10Q8WWZ4 1543 aa21.82■■□□□ 1.08
AL139353.1-202ENST00000547378 WDR97A6NE52 1622 aa21.8■■□□□ 1.08
AL139353.1-202ENST00000547378 RAD54L2Q9Y4B4 1467 aa21.77■■□□□ 1.07
AL139353.1-202ENST00000547378 KIF27Q86VH2 1401 aa21.67■■□□□ 1.06
AL139353.1-202ENST00000547378 ABCA5Q8WWZ7 1642 aa21.66■■□□□ 1.06
AL139353.1-202ENST00000547378 ZNF608Q9ULD9 1512 aaPredicted RBP21.65■■□□□ 1.06
AL139353.1-202ENST00000547378 EEA1Q15075 1411 aa21.64■■□□□ 1.06
AL139353.1-202ENST00000547378 GAPVD1Q14C86 1478 aa21.62■■□□□ 1.05
AL139353.1-202ENST00000547378 EIF4G3O43432 1585 aaKnown RBP21.61■■□□□ 1.05
AL139353.1-202ENST00000547378 TDRD9Q8NDG6 1382 aaKnown RBP21.61■■□□□ 1.05
AL139353.1-202ENST00000547378 ERICH3Q5RHP9 1530 aa21.58■■□□□ 1.04
AL139353.1-202ENST00000547378 AQRO60306 1485 aaKnown RBP eCLIP21.58■■□□□ 1.04
AL139353.1-202ENST00000547378 GRIN2BQ13224 1484 aa21.58■■□□□ 1.04
AL139353.1-202ENST00000547378 IGF1RP08069 1367 aa21.51■■□□□ 1.03
AL139353.1-202ENST00000547378 RUSC2Q8N2Y8 1516 aa21.5■■□□□ 1.03
AL139353.1-202ENST00000547378 MAGI1Q96QZ7 1491 aaPredicted RBP21.5■■□□□ 1.03
AL139353.1-202ENST00000547378 PBRM1Q86U86 1689 aa21.49■■□□□ 1.03
AL139353.1-202ENST00000547378 CUL7Q14999 1698 aa21.45■■□□□ 1.02
AL139353.1-202ENST00000547378 CSRNP3Q8WYN3 585 aa21.43■■□□□ 1.02
AL139353.1-202ENST00000547378 FHAD1B1AJZ9 1412 aa21.42■■□□□ 1.02
AL139353.1-202ENST00000547378 SNAPC4Q5SXM2 1469 aa21.41■■□□□ 1.02
AL139353.1-202ENST00000547378 ADAMTS12P58397 1594 aa21.4■■□□□ 1.02
AL139353.1-202ENST00000547378 PRXQ9BXM0 1461 aa21.4■■□□□ 1.02
AL139353.1-202ENST00000547378 SYNJ2O15056 1496 aa21.38■■□□□ 1.01
AL139353.1-202ENST00000547378 CARMIL1Q5VZK9 1371 aa21.37■■□□□ 1.01
AL139353.1-202ENST00000547378 KIF21BO75037 1637 aa21.33■■□□□ 1
AL139353.1-202ENST00000547378 RAPGEF2Q9Y4G8 1499 aa21.32■■□□□ 1
AL139353.1-202ENST00000547378 GRIN2AQ12879 1464 aa21.28■■□□□ 1
AL139353.1-202ENST00000547378 FAM9AQ8IZU1 332 aaPredicted RBP21.27■■□□□ 1
AL139353.1-202ENST00000547378 CHMP7Q8WUX9 453 aaPredicted RBP21.25■□□□□ 0.99
AL139353.1-202ENST00000547378 NUP160Q12769 1436 aa21.21■□□□□ 0.99
AL139353.1-202ENST00000547378 GOLGA3Q08378 1498 aa21.21■□□□□ 0.99
AL139353.1-202ENST00000547378 CHD1O14646 1710 aa21.19■□□□□ 0.98
AL139353.1-202ENST00000547378 FBLN2P98095 1184 aa21.13■□□□□ 0.97
AL139353.1-202ENST00000547378 CEP170Q5SW79 1584 aa21.12■□□□□ 0.97
AL139353.1-202ENST00000547378 KIAA0586Q9BVV6 1533 aa21.12■□□□□ 0.97
AL139353.1-202ENST00000547378 OSCARQ8IYS5 282 aa21.09■□□□□ 0.97
AL139353.1-202ENST00000547378 CLASP1Q7Z460 1538 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms