RNA–Protein interactions for RNA: ENST00000547275.5

TPCN1-209, Transcript of two pore segment channel 1, humanhuman

TSL 4

Gene TPCN1, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-209ENST00000547275 NISCHQ9Y2I1 1504 aa21.29■■□□□ 1
TPCN1-209ENST00000547275 CCDC180Q9P1Z9 1646 aa18.71■□□□□ 0.58
TPCN1-209ENST00000547275 ZCCHC6Q5VYS8 1495 aaKnown RBP17.82■□□□□ 0.44
TPCN1-209ENST00000547275 DCAF1Q9Y4B6 1507 aa17.77■□□□□ 0.44
TPCN1-209ENST00000547275 MYO15BQ96JP2 1530 aa17.71■□□□□ 0.43
TPCN1-209ENST00000547275 ABCC9O60706 1549 aa17.64■□□□□ 0.41
TPCN1-209ENST00000547275 NACADO15069 1562 aa17.52■□□□□ 0.39
TPCN1-209ENST00000547275 DCAF8L2P0C7V8 631 aa17.49■□□□□ 0.39
TPCN1-209ENST00000547275 RB1CC1Q8TDY2 1594 aa17.36■□□□□ 0.37
TPCN1-209ENST00000547275 SHROOM4Q9ULL8 1493 aa16.93■□□□□ 0.3
TPCN1-209ENST00000547275 SCRIBQ14160 1630 aa16.92■□□□□ 0.3
TPCN1-209ENST00000547275 UNC13AQ9UPW8 1703 aa16.79■□□□□ 0.28
TPCN1-209ENST00000547275 BICRAQ9NZM4 1560 aa16.71■□□□□ 0.27
TPCN1-209ENST00000547275 PABPN1Q86U42 306 aaKnown RBP eCLIP16.59■□□□□ 0.25
TPCN1-209ENST00000547275 BAZ1AQ9NRL2 1556 aaPredicted RBP16.5■□□□□ 0.23
TPCN1-209ENST00000547275 CECR2Q9BXF3 1484 aa16.42■□□□□ 0.22
TPCN1-209ENST00000547275 RSF1Q96T23 1441 aaPredicted RBP16.42■□□□□ 0.22
TPCN1-209ENST00000547275 SMARCA4P51532 1647 aa16.34■□□□□ 0.21
TPCN1-209ENST00000547275 MROH2BQ7Z745 1585 aa16.33■□□□□ 0.2
TPCN1-209ENST00000547275 SUPT5HO00267 1087 aaKnown RBP16.31■□□□□ 0.2
TPCN1-209ENST00000547275 PEG3Q9GZU2 1588 aa16.3■□□□□ 0.2
TPCN1-209ENST00000547275 EIF4G1Q04637 1599 aaKnown RBP16.26■□□□□ 0.19
TPCN1-209ENST00000547275 SMARCA2P51531 1590 aa16.23■□□□□ 0.19
TPCN1-209ENST00000547275 ATAD2BQ9ULI0 1458 aa16.19■□□□□ 0.18
TPCN1-209ENST00000547275 NCAPD3P42695 1498 aa16.18■□□□□ 0.18
TPCN1-209ENST00000547275 WIZO95785 1651 aa16.13■□□□□ 0.17
TPCN1-209ENST00000547275 TOP2AP11388 1531 aaKnown RBP16.09■□□□□ 0.17
TPCN1-209ENST00000547275 HMGXB3Q12766 1538 aa16.09■□□□□ 0.17
TPCN1-209ENST00000547275 BAZ1BQ9UIG0 1483 aaKnown RBP16.06■□□□□ 0.16
TPCN1-209ENST00000547275 CC2D2AQ9P2K1 1620 aa16.03■□□□□ 0.16
TPCN1-209ENST00000547275 CCDC88BA6NC98 1476 aa15.91■□□□□ 0.14
TPCN1-209ENST00000547275 CHIC1Q5VXU3 224 aa15.75■□□□□ 0.11
TPCN1-209ENST00000547275 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
TPCN1-209ENST00000547275 CADPSQ9ULU8 1353 aa15.72■□□□□ 0.11
TPCN1-209ENST00000547275 CFTRP13569 1480 aa15.71■□□□□ 0.11
TPCN1-209ENST00000547275 LAMC3Q9Y6N6 1575 aa15.62■□□□□ 0.09
TPCN1-209ENST00000547275 PDS5BQ9NTI5 1447 aa15.54■□□□□ 0.08
TPCN1-209ENST00000547275 PRDM2Q13029 1718 aa15.54■□□□□ 0.08
TPCN1-209ENST00000547275 TRIM41Q8WV44 630 aa15.51■□□□□ 0.07
TPCN1-209ENST00000547275 ABCC8Q09428 1581 aa15.47■□□□□ 0.07
TPCN1-209ENST00000547275 WRNQ14191 1432 aaPredicted RBP eCLIP15.47■□□□□ 0.07
TPCN1-209ENST00000547275 FANCD2Q9BXW9 1451 aa15.45■□□□□ 0.06
TPCN1-209ENST00000547275 AEBP2Q6ZN18 517 aaPredicted RBP15.41■□□□□ 0.06
TPCN1-209ENST00000547275 NESP48681 1621 aa15.39■□□□□ 0.05
TPCN1-209ENST00000547275 CEP164Q9UPV0 1460 aa15.39■□□□□ 0.05
TPCN1-209ENST00000547275 TOP2BQ02880 1626 aa15.35■□□□□ 0.05
TPCN1-209ENST00000547275 BIVM-ERCC5R4GMW8 1640 aa15.33■□□□□ 0.04
TPCN1-209ENST00000547275 EEA1Q15075 1411 aa15.32■□□□□ 0.04
TPCN1-209ENST00000547275 DNMBPQ6XZF7 1577 aa15.29■□□□□ 0.04
TPCN1-209ENST00000547275 CUX1P39880 1505 aa15.28■□□□□ 0.04
TPCN1-209ENST00000547275 SYNJ1O43426 1573 aa15.28■□□□□ 0.04
TPCN1-209ENST00000547275 MRC2Q9UBG0 1479 aa15.26■□□□□ 0.03
TPCN1-209ENST00000547275 TOPBP1Q92547 1522 aa15.25■□□□□ 0.03
TPCN1-209ENST00000547275 ERCC6Q03468 1493 aa15.23■□□□□ 0.03
TPCN1-209ENST00000547275 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
TPCN1-209ENST00000547275 URB2Q14146 1524 aaKnown RBP15.21■□□□□ 0.03
TPCN1-209ENST00000547275 WDR62O43379 1518 aa15.18■□□□□ 0.02
TPCN1-209ENST00000547275 FGD5Q6ZNL6 1462 aa15.17■□□□□ 0.02
TPCN1-209ENST00000547275 KIF27Q86VH2 1401 aa15.17■□□□□ 0.02
TPCN1-209ENST00000547275 SOGA1O94964 1423 aa15.16■□□□□ 0.02
TPCN1-209ENST00000547275 POLA1P09884 1462 aaPredicted RBP15.15■□□□□ 0.02
TPCN1-209ENST00000547275 CSRNP3Q8WYN3 585 aa15.15■□□□□ 0.02
TPCN1-209ENST00000547275 ABCA10Q8WWZ4 1543 aa15.14■□□□□ 0.01
TPCN1-209ENST00000547275 WDR97A6NE52 1622 aa15.1■□□□□ 0.01
TPCN1-209ENST00000547275 IFT140Q96RY7 1462 aa15.09■□□□□ 0.01
TPCN1-209ENST00000547275 THOC2Q8NI27 1593 aaKnown RBP15.09■□□□□ 0.01
TPCN1-209ENST00000547275 CUX2O14529 1486 aa15.05■□□□□ -0
TPCN1-209ENST00000547275 IGF1RP08069 1367 aa15.02■□□□□ -0
TPCN1-209ENST00000547275 TARBP1Q13395 1621 aaKnown RBP15.02□□□□□ -0.01
TPCN1-209ENST00000547275 RAD54L2Q9Y4B4 1467 aa15.01□□□□□ -0.01
TPCN1-209ENST00000547275 RUSC2Q8N2Y8 1516 aa14.99□□□□□ -0.01
TPCN1-209ENST00000547275 FAM9AQ8IZU1 332 aaPredicted RBP14.99□□□□□ -0.01
TPCN1-209ENST00000547275 ERICH3Q5RHP9 1530 aa14.98□□□□□ -0.01
TPCN1-209ENST00000547275 GAPVD1Q14C86 1478 aa14.98□□□□□ -0.01
TPCN1-209ENST00000547275 PRXQ9BXM0 1461 aa14.98□□□□□ -0.01
TPCN1-209ENST00000547275 KIF21BO75037 1637 aa14.96□□□□□ -0.01
TPCN1-209ENST00000547275 CARMIL1Q5VZK9 1371 aa14.95□□□□□ -0.02
TPCN1-209ENST00000547275 ABCA5Q8WWZ7 1642 aa14.94□□□□□ -0.02
TPCN1-209ENST00000547275 TDRD9Q8NDG6 1382 aaKnown RBP14.94□□□□□ -0.02
TPCN1-209ENST00000547275 GOLGA3Q08378 1498 aa14.94□□□□□ -0.02
TPCN1-209ENST00000547275 GRIN2BQ13224 1484 aa14.93□□□□□ -0.02
TPCN1-209ENST00000547275 TNIKQ9UKE5 1360 aa14.92□□□□□ -0.02
TPCN1-209ENST00000547275 CUL7Q14999 1698 aa14.9□□□□□ -0.02
TPCN1-209ENST00000547275 RAPGEF2Q9Y4G8 1499 aa14.9□□□□□ -0.02
TPCN1-209ENST00000547275 LOC105371045A0A1W2PR82 267 aa14.89□□□□□ -0.03
TPCN1-209ENST00000547275 FHAD1B1AJZ9 1412 aa14.87□□□□□ -0.03
TPCN1-209ENST00000547275 AQRO60306 1485 aaKnown RBP eCLIP14.86□□□□□ -0.03
TPCN1-209ENST00000547275 MAGI1Q96QZ7 1491 aaPredicted RBP14.85□□□□□ -0.03
TPCN1-209ENST00000547275 UBTFP17480 764 aaKnown RBP14.85□□□□□ -0.03
TPCN1-209ENST00000547275 ZNF608Q9ULD9 1512 aaPredicted RBP14.83□□□□□ -0.04
TPCN1-209ENST00000547275 EIF4G3O43432 1585 aaKnown RBP14.8□□□□□ -0.04
TPCN1-209ENST00000547275 PBRM1Q86U86 1689 aa14.78□□□□□ -0.04
TPCN1-209ENST00000547275 SYNJ2O15056 1496 aa14.76□□□□□ -0.05
TPCN1-209ENST00000547275 ADAMTS12P58397 1594 aa14.74□□□□□ -0.05
TPCN1-209ENST00000547275 CHMP7Q8WUX9 453 aaPredicted RBP14.73□□□□□ -0.05
TPCN1-209ENST00000547275 SNAPC4Q5SXM2 1469 aa14.72□□□□□ -0.05
TPCN1-209ENST00000547275 GRIN2AQ12879 1464 aa14.69□□□□□ -0.06
TPCN1-209ENST00000547275 CEP162Q5TB80 1403 aa14.69□□□□□ -0.06
TPCN1-209ENST00000547275 KIAA0586Q9BVV6 1533 aa14.67□□□□□ -0.06
TPCN1-209ENST00000547275 CLIP1P30622 1438 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms